EH117775

Overview
NameEH117775
Unique NameEH117775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length207
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:865..1071. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117775 vs. ExPASy Swiss-Prot
Match: CYSP3_OSTOS (Cathepsin B-like cysteine proteinase 3 (Fragment) OS=Ostertagia ostertagi GN=CP-3 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.234e-13
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = -2
Query:   18 QHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAV 191
            +H+  SAYR+ ++ + I  +I KNGPV   F VYEDFAHYKSG+YKH  G + GGHAV
Sbjct:   67 KHFGKSAYRLPNNVKAIQRDIMKNGPVVAGFIVYEDFAHYKSGIYKHTAGRMTGGHAV 124          
BLAST of EH117775 vs. ExPASy Swiss-Prot
Match: CPR4_CAEEL (Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = -2
Query:   18 TNSQHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAV 200
            T  +H+  +AY +      I AEI  +GPVE +FTVYEDF  YK+GVY H TG  +GGHA+
Sbjct:  223 TADKHFGSTAYAVGKKVSQIQAEIIAHGPVEAAFTVYEDFYQYKTGVYVHTTGQELGGHAI 283          
BLAST of EH117775 vs. ExPASy Swiss-Prot
Match: CYSP_SCHJA (Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.039e-12
Identity = 27/58 (46.55%), Postives = 42/58 (72.41%), Query Frame = -2
Query:   18 QHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAV 191
            +HY   +Y + ++ + I  +I   GPVE +F VYEDF +YKSG+Y+H+TG ++GGHA+
Sbjct:  233 KHYGDESYNVQNNEKVIQRDIMMYGPVEAAFDVYEDFLNYKSGIYRHVTGSIVGGHAI 290          
BLAST of EH117775 vs. ExPASy Swiss-Prot
Match: CPR3_CAEEL (Cathepsin B-like cysteine proteinase 3 OS=Caenorhabditis elegans GN=cpr-3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.039e-12
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = -2
Query:   18 QHYSISAYRINSDPE--DIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAV 191
            +HY  SAY++ +     +I  EIY  GPVE S+ VYEDF HYKSGVY + +G ++GGHAV
Sbjct:  227 KHYGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVYHYTSGKLVGGHAV 286          
BLAST of EH117775 vs. ExPASy Swiss-Prot
Match: CYSP2_HAECO (Cathepsin B-like cysteine proteinase 2 OS=Haemonchus contortus GN=AC-2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.771e-12
Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = -2
Query:   18 QHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAV 191
            + Y   AY +    + I +EI KNGPV  SF VYEDF HYKSG+YKH  G++ G HAV
Sbjct:  230 KRYGKDAYIVKQSVKAIQSEILKNGPVVASFAVYEDFRHYKSGIYKHTAGELRGYHAV 287          
BLAST of EH117775 vs. ExPASy Swiss-Prot
Match: CPR5_CAEEL (Cathepsin B-like cysteine proteinase 5 OS=Caenorhabditis elegans GN=cpr-5 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12
Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = -2
Query:   18 QHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAV 191
            +H+  +AY +    E I  EI  NGP+EV+FTVYEDF  Y +GVY H  G  +GGHAV
Sbjct:  231 KHFGSTAYAVGKKVEQIQTEILTNGPIEVAFTVYEDFYQYTTGVYVHTAGASLGGHAV 288          
BLAST of EH117775 vs. ExPASy Swiss-Prot
Match: CYSP1_HAECO (Cathepsin B-like cysteine proteinase 1 OS=Haemonchus contortus GN=AC-1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.508e-11
Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = -2
Query:   18 QHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAV 191
            + Y   AY +    + I +EI +NGPV  SF VYEDF HYKSG+YKH  G++ G HAV
Sbjct:  230 KRYGKDAYIVKQSVKAIQSEILRNGPVVASFAVYEDFRHYKSGIYKHTAGELRGYHAV 287          
BLAST of EH117775 vs. ExPASy Swiss-Prot
Match: CYSP1_OSTOS (Cathepsin B-like cysteine proteinase 1 OS=Ostertagia ostertagi GN=CP-1 PE=3 SV=3)

HSP 1 Score: 65.855 bits (159), Expect = 7.486e-11
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = -2
Query:   18 SQHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAV 194
            S  Y   AY++ +  + I  +I KNGPV  ++TVYEDFAHY+SG+YKH  G   G HAV
Sbjct:  232 SDRYYKKAYQLKNSVKAIQKDIMKNGPVVATYTVYEDFAHYRSGIYKHKAGRKTGLHAV 290          
BLAST of EH117775 vs. ExPASy Swiss-Prot
Match: CTSB_DICDI (Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.777e-11
Identity = 33/61 (54.10%), Postives = 38/61 (62.30%), Query Frame = -2
Query:   18 TNSQHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAV 200
            +  +H     Y  +SD E IM EI  NGPVE  FTV+EDF  YKSGVY H TG  +GGH V
Sbjct:  204 SQDKHKMAKIYSFDSD-EAIMQEIVTNGPVEACFTVFEDFLAYKSGVYVHTTGKDLGGHCV 263          
The following BLAST results are available for this feature:
BLAST of EH117775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CYSP3_OSTOS1.234e-1356.90Cathepsin B-like cysteine proteinase 3 (Fragment) ... [more]
CPR4_CAEEL1.782e-1250.82Cathepsin B-like cysteine proteinase 4 OS=Caenorha... [more]
CYSP_SCHJA3.039e-1246.55Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CPR3_CAEEL3.039e-1253.33Cathepsin B-like cysteine proteinase 3 OS=Caenorha... [more]
CYSP2_HAECO6.771e-1253.45Cathepsin B-like cysteine proteinase 2 OS=Haemonch... [more]
CPR5_CAEEL8.843e-1251.72Cathepsin B-like cysteine proteinase 5 OS=Caenorha... [more]
CYSP1_HAECO1.508e-1151.72Cathepsin B-like cysteine proteinase 1 OS=Haemonch... [more]
CYSP1_OSTOS7.486e-1150.85Cathepsin B-like cysteine proteinase 1 OS=Ostertag... [more]
CTSB_DICDI9.777e-1154.10Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE... [more]

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Properties
Property NameValue
Genbank descriptionfjfw7 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117775 ID=EH117775; Name=EH117775; organism=Citrus sinensis; type=EST; length=207bp
GACGATGAGTCCTGAGTAACAGCATGACCCCCCATTACATCGCCTGTGAT
GTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATAAACTGTGA
AGGAAACTTCAACTGGTCCATTCTTGTAAATTTCTGCCATTATGTCCTCT
GGATCAGAATTGATTCTATATGCACTAATACTGTAGTGCTGTGAATTGGT
ACGCAGT
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