EH117771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_BRAFL (40S ribosomal protein S6 OS=Branchiostoma floridae GN=RPS6 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.099e-25 Identity = 53/71 (74.65%), Postives = 64/71 (90.14%), Query Frame = -1 Query: 18 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 230 ++KGY+ R+SGGNDK+GFPMKQGVL RVRLL+ KGHS YRPRRTGERKRKSVRGCIV S+L+VL+LV++ Sbjct: 44 EWKGYLVRISGGNDKQGFPMKQGVLTNGRVRLLLGKGHSCYRPRRTGERKRKSVRGCIVDSNLSVLNLVIL 114
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_AEDAL (40S ribosomal protein S6 OS=Aedes albopictus GN=RpS6 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.354e-25 Identity = 52/71 (73.24%), Postives = 63/71 (88.73%), Query Frame = -1 Query: 18 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 230 ++KGYVF+++GGNDK+GFPMKQGVL RVRLL+ KGHS YRPRRTGERKRKSVRGCIV +L+ L+L+VV Sbjct: 44 EWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVV 114
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_AEDAE (40S ribosomal protein S6 OS=Aedes aegypti GN=RpS6 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 5.354e-25 Identity = 52/71 (73.24%), Postives = 63/71 (88.73%), Query Frame = -1 Query: 18 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 230 ++KGYVF+++GGNDK+GFPMKQGVL RVRLL+ KGHS YRPRRTGERKRKSVRGCIV +L+ L+L+VV Sbjct: 44 EWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVV 114
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_YARLI (40S ribosomal protein S6 OS=Yarrowia lipolytica GN=RPS6 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.193e-24 Identity = 53/73 (72.60%), Postives = 63/73 (86.30%), Query Frame = -1 Query: 12 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRRTGERKRKSVRGCIVGSDLAVLSLVVVTQ 230 +FKGYV +++GGNDK+GFPMKQGV+ P RVRLL+SK S YR RR GERKRKSVRGCIV SDL+VLS+V+V Q Sbjct: 44 EFKGYVLKITGGNDKQGFPMKQGVMHPTRVRLLLSKDSSCYRSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQ 116
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_ONCMY (40S ribosomal protein S6 OS=Oncorhynchus mykiss GN=rps6 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.657e-24 Identity = 51/71 (71.83%), Postives = 64/71 (90.14%), Query Frame = -1 Query: 18 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 230 ++KGY+ R+SGGNDK+GFPMKQGVL RVRLL++KGHS YRPRRTGERKRKSVRGCI ++L+VL+LV++ Sbjct: 44 EWKGYMVRISGGNDKQGFPMKQGVLTHGRVRLLLAKGHSCYRPRRTGERKRKSVRGCIGDANLSVLNLVII 114
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_DROME (40S ribosomal protein S6 OS=Drosophila melanogaster GN=RpS6 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.532e-24 Identity = 51/71 (71.83%), Postives = 63/71 (88.73%), Query Frame = -1 Query: 18 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 230 ++KGY R++GGNDK+GFPMKQGVL RVRLL+ KGHS YRPRRTGERKRKSVRGCIV ++++VL+LVV+ Sbjct: 44 EWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVL 114
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_CAEEL (40S ribosomal protein S6 OS=Caenorhabditis elegans GN=rps-6 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.450e-22 Identity = 47/71 (66.20%), Postives = 59/71 (83.10%), Query Frame = -1 Query: 18 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 230 ++KGYV R+ GGNDK+GFPMKQG+L RVRLL+ KG S YR R+ GERKRKSVRGCIV ++++ LSLV+V Sbjct: 44 EWKGYVVRIGGGNDKQGFPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIV 114
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 6.125e-21 Identity = 50/78 (64.10%), Postives = 62/78 (79.49%), Query Frame = -1 Query: 3 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYR--PRRTGERKRKSVRGCIVGSDLAVLSLVVVTQDSS 230 +FKGYVF++ GG DK+GFPMKQGVL P RVRLL+ +G +R RRTGER+RKSVRGCIV DL+VL+LV+V + S Sbjct: 44 EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGVS 121
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.125e-21 Identity = 49/73 (67.12%), Postives = 60/73 (82.19%), Query Frame = -1 Query: 18 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYR--PRRTGERKRKSVRGCIVGSDLAVLSLVVV 230 +FKGYVF++ GG DK+GFPMKQGVL P RVRLL+ +G +R RRTGER+RKSVRGCIV DL+VL+LV+V Sbjct: 44 EFKGYVFKIKGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIV 116
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.040e-20 Identity = 48/73 (65.75%), Postives = 59/73 (80.82%), Query Frame = -1 Query: 18 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYR--PRRTGERKRKSVRGCIVGSDLAVLSLVVV 230 +FKGYVF++ GG DK+GFPMKQGVL P RVRLL+ +G +R RR GER+RKSVRGCIV DL+VL+LV+V Sbjct: 44 EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIV 116 The following BLAST results are available for this feature:
BLAST of EH117771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >EH117771 ID=EH117771; Name=EH117771; organism=Citrus sinensis; type=EST; length=239bpback to top |