CX671827

Overview
NameCX671827
Unique NameCX671827
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671827_ssr65 microsatellite CX671827_ssr65:65..88. BLAST: Citrus ESTs to Prunus persica proteins V1
CX671827_ssr91 microsatellite CX671827_ssr91:91..100. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7468 contig Csv1_Contig7468:415..1276. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671827 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.354e-21
Identity = 51/119 (42.86%), Postives = 75/119 (63.03%), Query Frame = 2
Query:  302 QVIEMQAAVHQCSATIDFMEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFY-VGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 655
            +VI  QA+V +C+A +DF+++    +P T+N   +++   +V + MVG  NV      MGAEDF+FY   +PA ++Y +G  NET  P    HSPY  ++EDALP GAAL A++A  YL
Sbjct:  307 EVIVSQASVQRCNAVVDFLDKDRPFFPPTINSAGLHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQAPHHSPYFTINEDALPYGAALQASLATRYL 425          
BLAST of CX671827 vs. ExPASy Swiss-Prot
Match: ILL5_ORYSJ (IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.267e-20
Identity = 56/149 (37.58%), Postives = 75/149 (50.34%), Query Frame = 2
Query:  227 GTFTPLTEENCLNSN*GHRNSTYCYQVIEMQAAVHQCSATIDFMEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLEVE 673
            GT   LT E        +R      +V+E QAAVH+C   +    +    YPA  NDEK++ H + VG  ++G   V      M  EDF+FY Q +P   F +G RN  +     +H+P   VDED +PIGAALH A+A  YL     E
Sbjct:  275 GTLRSLTTEGL------YRLQKRVKEVVEGQAAVHRCKGVVQIKRDDYPMYPAVFNDEKLHHHVETVGRRLLGPDKVKPGEKIMAGEDFAFYQQLVPGVMFGIGIRNGEVGSVHTVHNPKFFVDEDVIPIGAALHTALAEMYLTERSTE 417          
BLAST of CX671827 vs. ExPASy Swiss-Prot
Match: ILL3_ARATH (IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.212e-20
Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = 2
Query:  302 QVIEMQAAVHQCSATIDFMEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 655
            +V+E QA V +C A ID  E+    YPATVND K++E  ++V   ++G   V      M  EDF+FY Q++P  +  +G RNE +     +HSPY  +DE+ LPIG+A  AA+A  YL
Sbjct:  300 EVVEGQAEVQRCKADIDMHEDDHPMYPATVNDHKLHEFTEKVLKLLLGPEKVKPANKVMAGEDFAFYQQKIPGYYIGIGIRNEEIGSVRSVHSPYFFLDENVLPIGSATFAALAEMYL 417          
BLAST of CX671827 vs. ExPASy Swiss-Prot
Match: ILL5_ARATH (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.951e-19
Identity = 48/118 (40.68%), Postives = 74/118 (62.71%), Query Frame = 2
Query:  302 QVIEMQAAVHQCSATIDFMEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 655
            QVI  QA+V+ C+AT+DF+E++   +P TVN++ ++   K V   M+G  N   T   M +EDF+FY Q +P    +VG +N++  P    HSP+  V+E+ LP GA+L A++A  YL
Sbjct:  306 QVITTQASVNMCNATVDFLEDETPPFPPTVNNKTLHLFYKNVSVDMLGIENYVETLPVMVSEDFAFYQQAIPGHFSFVGMQNKSHSPMANPHSPFFEVNEELLPYGASLLASLATRYL 423          
BLAST of CX671827 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.549e-18
Identity = 58/149 (38.93%), Postives = 83/149 (55.70%), Query Frame = 2
Query:  221 IRGTFTPLTEENCLNSN*GHRNSTYCYQVIEMQAAVHQCSATIDFMEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVE--MGAEDFSFYTQRMPAAHFY-VGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 658
            I GTF   + E  L      R      +VI  Q+AV++C+A +DF        P T+N   ++ H + V A  +G     L  +E  MG+EDF+ +++ +PA+HFY VG RNE        HSP+  VD+ ALP GAALHA++A+ YLD
Sbjct:  300 IGGTFRVFSNEGFL------RLKRRIEEVIVAQSAVYRCAAAVDFHAGGRPLLPPTINSAALHAHFQAVAAETLGASAAVLGAMEPCMGSEDFAVFSEAVPASHFYFVGVRNEAEGLVHLAHSPHFRVDDAALPYGAALHASLAMRYLD 442          
BLAST of CX671827 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.893e-16
Identity = 46/119 (38.66%), Postives = 74/119 (62.18%), Query Frame = 2
Query:  302 QVIEMQAAVHQCSATIDFMEEKMRHYPATVNDEKMYEHGKRVGASMVG-EPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 655
            +VI  QAAVH+C+A+++         P TVN++ +Y+  K+V   ++G E  V   PV MG+EDFS++ + +P     +G ++ET   +   HSP   ++ED LP GAA+HA++A+ YL
Sbjct:  307 EVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPV-MGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAVQYL 423          
BLAST of CX671827 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.893e-16
Identity = 42/118 (35.59%), Postives = 73/118 (61.86%), Query Frame = 2
Query:  302 QVIEMQAAVHQCSATIDFMEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 655
            ++I  QAAVH+C+A+++      +  P TVN+  +Y+  K+V   ++G+        EMG+EDFS++ + +P     +G ++ET + +   HSP+  ++ED LP GAA+HA +A+ YL
Sbjct:  306 EIITKQAAVHRCNASVNLAPNGNQPMPPTVNNMDLYKKFKKVVRDLLGQEAFVEAVPEMGSEDFSYFAETIPGHFSLLGMQDET-QGYASSHSPHYRINEDVLPYGAAIHATMAVQYL 422          
BLAST of CX671827 vs. ExPASy Swiss-Prot
Match: CBPX1_SULSO (Thermostable carboxypeptidase 1 OS=Sulfolobus solfataricus GN=cpsA1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.395e-11
Identity = 41/131 (31.30%), Postives = 69/131 (52.67%), Query Frame = 2
Query:  260 LNSN*GHRNSTYCYQVIEMQAAVHQCSATIDFMEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 652
            L+ N   +   Y  +++     ++  +  + FME+    YP TVN+ ++ +   ++ +S+     V   PV +GAEDFS + Q+ P  +F++GTRNE        HS    VDED L +GA  HA +A+ +
Sbjct:  266 LDENVRSKAKDYMRRIVSSICGIYGATCEVKFMEDV---YPTTVNNPEVTDEVMKILSSI--STVVETEPV-LGAEDFSRFLQKAPGTYFFLGTRNEKKGCIYPNHSSKFCVDEDVLKLGALAHALLAVKF 390          
BLAST of CX671827 vs. ExPASy Swiss-Prot
Match: CBPX2_SULSO (Thermostable carboxypeptidase 2 OS=Sulfolobus solfataricus GN=cpsA2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.128e-11
Identity = 42/131 (32.06%), Postives = 69/131 (52.67%), Query Frame = 2
Query:  260 LNSN*GHRNSTYCYQVIEMQAAVHQCSATIDFMEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 652
            L+ N   +   Y  +++     ++  +  + FME+    YP TVN+ ++ +   ++ +S+     V   PV +GAEDFS + Q+ P  +F++GTRNE        HS    VDED L +GA  HA +AI +
Sbjct:  266 LDENVRSKAKDYMRRIVSSICGIYGATCEVKFMEDV---YPITVNNPEVTDEVMKILSSI--STVVETEPV-LGAEDFSRFLQKAPGMYFFLGTRNEKKGCIYPNHSSKFCVDEDVLKLGALAHALLAIKF 390          
The following BLAST results are available for this feature:
BLAST of CX671827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
ILL1_ORYSI4.354e-2142.86IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL5_ORYSJ1.267e-2037.58IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sati... [more]
ILL3_ARATH8.212e-2042.37IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsi... [more]
ILL5_ARATH6.951e-1940.68IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsi... [more]
ILL2_ORYSJ1.549e-1838.93IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
ILL2_ARATH1.893e-1638.66IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL1_ARATH1.893e-1635.59IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
CBPX1_SULSO2.395e-1131.30Thermostable carboxypeptidase 1 OS=Sulfolobus solf... [more]
CBPX2_SULSO3.128e-1132.06Thermostable carboxypeptidase 2 OS=Sulfolobus solf... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D05-G9-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671827 ID=CX671827; Name=CX671827; organism=Citrus sinensis; type=EST; length=862bp
TTTTTTTTTTTTTTTTTGCTTCAAATGTAGCTGAAAGAGTAGACTCCCTT
TCAAGGCTGTGATCATATATATATATATATATATATATACATATATATAT
TTATTACATAAGATTATTGCTCAAGAGTACAACTCATATTACATGAGATT
ACAACTGATATTTACAAATCAAACTATTACTAGAATTAGTAAGCCTGCCC
AGATTTTTACTCTCTCTAATATTCGAGGGACGTTTACTCCACTCACAGAA
GAAAACTGCCTTAACTCAAATTGAGGTCATAGAAATAGCACTTATTGTTA
TCAGGTCATAGAAATGCAAGCAGCAGTTCATCAGTGTAGTGCAACAATAG
ACTTCATGGAGGAAAAAATGAGGCATTATCCGGCAACTGTAAATGATGAA
AAAATGTATGAACACGGCAAGAGGGTCGGCGCATCCATGGTTGGAGAGCC
AAACGTGCATCTTACTCCAGTTGAGATGGGAGCAGAGGACTTCAGCTTCT
ACACTCAGAGGATGCCAGCTGCACATTTTTATGTCGGTACAAGGAATGAA
ACGCTTAAGCCATTCATCCGACTGCACTCCCCGTACTTAGTTGTTGATGA
GGATGCCCTTCCTATTGGAGCAGCTCTTCATGCTGCAGTAGCCATCTCTT
ACTTGGACAACCTTGAAGTTGAAGTACAATAGGAATGGTGTGTCTTCGTA
AGAGAGTTTTATTTTTGAACTAGTAAAAAAGAATTGTATATTTAAATCCA
GTGGTATTTCAATGCCGTCCTTGTAATAATAAACCATCTTAATTTATCGT
GAATTTATGATGAAGAGGCTCTAGCATAACATTAACCAATCCGTTGAAAC
TGAATAGAAACA
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