CX671688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 1.229e-41 Identity = 77/122 (63.11%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 +++ + V G++ F Q T V G I+GLKPGLHGFH+HALGDTTNGC STGPH+NP K+HGAP D RH GDLGNI G DG A +I D+ IPL+G SI+GRAVVVHADPDDLGKG Sbjct: 7 VLNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKG 128
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 73/122 (59.84%), Postives = 92/122 (75.41%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 +++G+ V+G++ F Q G T + G ++GLKPGLHGFH+HALGDTTNGC STGPHFNP K+HGAP D RH GDLGN+ G DG ++ D IPL+G +S++GRAVVVHAD DDLGKG Sbjct: 7 VLTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVHADSDDLGKG 128
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_CAPAN (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN=SODCC PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 76/122 (62.30%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++S + V G++ F Q + T V G ++GLKPGLHGFH+HALGDTTNGC STGPH+NP K+HGAP D RH GDLGNI G DG A +I D IPL+G SI+GR VVVHADPDDLGKG Sbjct: 7 VLSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVHADPDDLGKG 128
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 6.097e-41 Identity = 77/122 (63.11%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 +++ + V G+ F Q T V G I+GLKPGLHGFH+HALGDTTNGC STGPH+NP K+HGAP D RH GDLGNI G DG A +I D+ IPL+G SI+GRAVVVHADPDDLGKG Sbjct: 7 VLNSSEGVSGTYLFTQVGVAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKG 128
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 1.358e-40 Identity = 77/123 (62.60%), Postives = 91/123 (73.98%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++S + V G++ F Q G T V G ++GLKPG HGFH+HALGDTTNGC STGPH+NP KDHGAP D RH GDLGN+ G DG A+ +I D+ IPL G SI+GRAVVVHADPDDLGKG Sbjct: 7 VLSSSEGVSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALGDTTNGCMSTGPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQIPLIGAQSIIGRAVVVHADPDDLGKG 129
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC2_BRAJU (Superoxide dismutase [Cu-Zn] 2 OS=Brassica juncea GN=SODCC2 PE=2 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 1.774e-40 Identity = 78/122 (63.93%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 +++ + VKG++ F Q G T V G ++GLKPGLHGFH+HALGDTTNG STGPHFNP K HGAP D RH GDLGNI+ G DG A +I D IPLSG +SI+GRAVVVHADPD LGKG Sbjct: 7 VLNSSEGVKGTIFFAQEGEGKTTVTGTVSGLKPGLHGFHVHALGDTTNGSMSTGPHFNPDGKQHGAPEDANRHAGDLGNIIVGDDGTATFTITDCQIPLSGPNSIVGRAVVVHADPDVLGKG 128
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_SOYBN (Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD1 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.741e-40 Identity = 75/122 (61.48%), Postives = 87/122 (71.31%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ + V G++ F Q NG T V G + GLKPGLHGFH+HALGDTTNGC STG HFNP +HGAP D RH GDLGN+ G DG SI D IPL+G +SI+GRAVVVHAD DDLGKG Sbjct: 7 VLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSDDLGKG 128
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_CAVPO (Superoxide dismutase [Cu-Zn] OS=Cavia porcellus GN=SOD1 PE=1 SV=3) HSP 1 Score: 162.925 bits (411), Expect = 1.502e-39 Identity = 75/122 (61.48%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V+G +HF Q NG VKG+ITGL G HGFH+H GD T GC S GPHFNPL K HG P D ERH GDLGN+ AG DGVA VSI D +I LSG +SI+GR +VVH PDDLGKG Sbjct: 8 VLKGDGPVQGIIHFEQKANGPVVVKGRITGLVEGKHGFHVHEFGDNTQGCTSAGPHFNPLSKKHGGPQDEERHVGDLGNVTAGADGVANVSIEDSLISLSGANSIIGRTMVVHEKPDDLGKG 129
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.076e-37 Identity = 73/122 (59.84%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G ++V+G + Q +G T V +I+GL PG HGFH+H GDTTNGC STGPHFNP KK HGAP D RH GDLGNIVA DGVAE +I D IPL+G +S++GRA+VVH DDLGKG Sbjct: 76 VLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKG 197
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.406e-37 Identity = 75/116 (64.66%), Postives = 87/116 (75.00%), Query Frame = 1 Query: 106 SVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 SVKG+L+F Q G V G+++GL PG HGFHIH GD TNGC S+G HFNP K+ HGAP D+ RH GDLGNI A GVA V+I DRMI L+G+HSI+GRAVVVHA DDLGKG Sbjct: 12 SVKGTLNFKQDAIGSCTVTGEVSGLIPGKHGFHIHEYGDLTNGCTSSGGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITDRMISLTGEHSIIGRAVVVHAGEDDLGKG 127 The following BLAST results are available for this feature:
BLAST of CX671688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671688 ID=CX671688; Name=CX671688; organism=Citrus sinensis; type=EST; length=705bpback to top |