CX671688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.316e-35 Identity = 67/123 (54.47%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 +++G VKG + F Q NG HV + +GLK G HGFH+H GDTTNGC S G HFNP K++HGAP D+ RH GDLGN+VAG DG A + D++I L+G HSI+GR +V+H + DDLG+G Sbjct: 6 VMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRG 128
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_DANRE (Superoxide dismutase [Cu-Zn] OS=Danio rerio GN=sod1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.718e-35 Identity = 69/123 (56.10%), Postives = 85/123 (69.11%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQ-GPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V G+++F Q G V G+ITGL PG HGFH+HA GD TNGC S GPHFNP K HG P+D+ RH GDLGN+ A GVA++ I D M+ LSGQHSI+GR +V+H DDLGKG Sbjct: 8 VLKGTGEVTGTVYFNQEGEKKPVKVTGEITGLTPGKHGFHVHAFGDNTNGCISAGPHFNPHDKTHGGPTDSVRHVGDLGNVTADASGVAKIEIEDAMLTLSGQHSIIGRTMVIHEKEDDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.718e-35 Identity = 70/122 (57.38%), Postives = 87/122 (71.31%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G ++V+G + Q T V +ITGL PGLHGFH+H GDTTNGC STGPHFNP + HGAP D RH GDLGNI+A +GVAE +I D IPL+G +S++GRA+VVH DDLGKG Sbjct: 56 VLKGNSTVEGVVTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKG 177
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.718e-35 Identity = 71/122 (58.20%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G + V+G + Q +G T V +ITGL PG HGFH+H GDTTNGC STGPHFNP HGAP D RH GDLGNI A DGVAE +I D IPL+G +S++GRA VVH DDLGKG Sbjct: 70 VLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKG 191
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_CARCR (Superoxide dismutase [Cu-Zn] OS=Caretta caretta PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.244e-35 Identity = 68/115 (59.13%), Postives = 80/115 (69.57%), Query Frame = 1 Query: 109 VKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 VKG ++F Q NG + G ITGL G HGFH+H GD TNGC S G HFNP K+HG P DNERH GDLGN++A +GVAEV I D +I L+G SI+GR +VVH DDLGKG Sbjct: 28 VKGIIYFEQQGNGPVTLSGSITGLTEGKHGFHVHEFGDNTNGCTSAGAHFNPPGKNHGGPQDNERHVGDLGNVIANKEGVAEVCIKDSLISLTGSQSIIGRTMVVHEKEDDLGKG 142
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.244e-35 Identity = 70/122 (57.38%), Postives = 87/122 (71.31%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G +SV+G + Q +G T V +ITGL PG HGFH+H GDTTNGC STG HFNP HGAP D+ RH GDLGNI+A +GVAE +I D IPLSG ++++GRA+VVH DDLGKG Sbjct: 66 VLKGTSSVEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLGKG 187
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.931e-35 Identity = 69/116 (59.48%), Postives = 82/116 (70.69%), Query Frame = 1 Query: 109 VKGSLHFVQ-GPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 VKG++HF Q V G++ GL GLHGFH+H GD TNGC S GPHFNP HGAPSD RH GDLGNI A DG +V I+D++I L G++SI+GR +VVHADPDDLGKG Sbjct: 13 VKGTVHFEQQDAKSPVLVTGEVNGLAKGLHGFHVHEFGDNTNGCTSAGPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVHADPDDLGKG 128
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_RABIT (Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD1 PE=1 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 3.828e-35 Identity = 68/122 (55.74%), Postives = 82/122 (67.21%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V+ ++HF Q G VKG+ITGL GLH FH+H GD GC S GPHFNPL K HG P D ERH GDLGN+ AG +GVA+V I D +I LSG S++GR +VVH DDLGKG Sbjct: 8 VLKGDGPVEATIHFEQKGTGPVVVKGRITGLTEGLHEFHVHQFGDNRQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAGSNGVADVLIEDSVISLSGDMSVIGRTLVVHEKEDDLGKG 129
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.999e-35 Identity = 71/117 (60.68%), Postives = 84/117 (71.79%), Query Frame = 1 Query: 106 SVKGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 +V G + F Q G+ T V G++ GL PGLHGFHIH GDTTNGC S GPHFNP K HG +D RH GDLGNI AG DG A +SI+D+ I L G +SI+GR++VVHAD DDLGKG Sbjct: 13 TVSGIIRFKQDKEGLPTTVTGEVKGLTPGLHGFHIHQYGDTTNGCISAGPHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQHIQLLGPNSIIGRSIVVHADQDDLGKG 129
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_PANTR (Superoxide dismutase [Cu-Zn] OS=Pan troglodytes GN=SOD1 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34 Identity = 70/123 (56.91%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNPL + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDLGKG Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKG 130 The following BLAST results are available for this feature:
BLAST of CX671688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671688 ID=CX671688; Name=CX671688; organism=Citrus sinensis; type=EST; length=705bpback to top |