CX671688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_CHYAM (Superoxide dismutase [Cu-Zn] OS=Chymomyza amoena GN=Sod PE=3 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 7.219e-34 Identity = 70/115 (60.87%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 112 KGSLHFVQGPN-GVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 KG+++F Q V G+ITGL G HGFH+H GD TNGC S+GPHFNPL K+HGAP+D RH GDLGNI A DG +V I D I L G++SI+GR VVVHADPDDLGKG Sbjct: 14 KGTVYFEQEDACAPVKVCGEITGLNKGQHGFHVHEFGDNTNGCMSSGPHFNPLNKEHGAPTDENRHLGDLGNIEAPGDGPTKVCINDSKITLFGENSIVGRTVVVHADPDDLGKG 128
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_CAPHI (Superoxide dismutase [Cu-Zn] OS=Capra hircus GN=SOD1 PE=2 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 7.219e-34 Identity = 68/122 (55.74%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL K HG P D ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG+G Sbjct: 8 VLKGDGPVQGTIHFEAKGDKVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRG 128
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_CHICK (Superoxide dismutase [Cu-Zn] OS=Gallus gallus GN=SOD1 PE=1 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 2.100e-33 Identity = 68/122 (55.74%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V+G +HF Q +G V GKITGL G HGFH+H GD TNGC S G HFNP K HG P D +RH GDLGN+ A GVAEV I D +I L+G H I+GR +VVHA DDLG+G Sbjct: 9 VMKGDAPVEGVIHFQQQGSGPVKVTGKITGLSDGDHGFHVHEFGDNTNGCTSAGAHFNPEGKQHGGPKDADRHVGDLGNVTA-KGGVAEVEIEDSVISLTGPHCIIGRTMVVHAKSDDLGRG 129
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.743e-33 Identity = 69/115 (60.00%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 112 KGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 KG++ F Q V G++TGL GLHGFH+H GD TNGC S+GPHFNP K+HGAP+D RH GDLGNI A DG V I D I L G +SI+GR VVVHADPDDLGKG Sbjct: 6 KGTVFFEQESEKCPVKVTGEVTGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCKITLFGANSIIGRTVVVHADPDDLGKG 120
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_SHEEP (Superoxide dismutase [Cu-Zn] OS=Ovis aries GN=SOD1 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 6.111e-33 Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V+G++ F + V V G ITGL G HGFH+H GD T GC S GPHFNPL K HG P D ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG+G Sbjct: 8 VLKGDGPVQGTIRFEAKGDKVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRG 128
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODE_ONCVO (Extracellular superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-4 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.042e-32 Identity = 65/123 (52.85%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNG-VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V G ++F QG G +T + G ++GL PGLHGFH+H GD TNGC S G H+NP K HG P+D +H GDLGNIVAG +GVAEV I I L G S++G ++VVHA+ DDLG+G Sbjct: 50 VLRGDAGVSGIIYFQQGSGGSITTISGSVSGLTPGLHGFHVHQYGDQTNGCTSAGDHYNPFGKTHGGPNDRIKHIGDLGNIVAGANGVAEVYINSYDIKLRGPLSVIGHSLVVHANTDDLGQG 172
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC1_DICDI (Superoxide dismutase [Cu-Zn] 1 OS=Dictyostelium discoideum GN=sodA PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.042e-32 Identity = 67/116 (57.76%), Postives = 83/116 (71.55%), Query Frame = 1 Query: 109 VKGSLHFVQ-GPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 V G + F Q + V ITGL+ G HGFH+HA GDTTNGC S GPHFNP K+HGAPSD +RH GDLGNIVA + + +I+D++I L G+H+I+GR +VVHAD DDLGKG Sbjct: 14 VNGVVKFTQENKDSPVTVNYDITGLEKGEHGFHVHAFGDTTNGCVSAGPHFNPFGKNHGAPSDEDRHVGDLGNIVADGESNTKGTISDKIISLFGEHTIVGRTMVVHADQDDLGKG 129
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC1_XENLA (Superoxide dismutase [Cu-Zn] A OS=Xenopus laevis GN=sod1-A PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.961e-32 Identity = 66/122 (54.10%), Postives = 80/122 (65.57%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 +++G+ VKG + F Q +G V+GKI GL G HGFHIH GD TNGC S GPHFNP K+HG+P D +RH GDLGN+ A GVA+ D I L G+ SI+GR VVH DDLGKG Sbjct: 7 VLAGSGDVKGVVRFEQQDDGDVTVEGKIEGLTDGNHGFHIHVFGDNTNGCLSAGPHFNPQNKNHGSPKDADRHVGDLGNVTA-EGGVAQFKFTDPQISLKGERSIIGRTAVVHEKQDDLGKG 127
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_CAEBR (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis briggsae GN=sod-1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.174e-32 Identity = 59/99 (59.60%), Postives = 76/99 (76.77%), Query Frame = 1 Query: 157 VKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++G+I GL PGLHGFH+H GD+TNGC S GPHFNP K HG P+ RH GDLGN+ AG DGVA+V I D++I L G ++++GR++VVHA DDLG+G Sbjct: 53 IEGEIKGLTPGLHGFHVHQYGDSTNGCLSAGPHFNPFGKTHGGPNSETRHVGDLGNVEAGADGVAKVHITDKLITLYGANTVIGRSMVVHAGQDDLGQG 151
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_DROPS (Superoxide dismutase [Cu-Zn] OS=Drosophila pseudoobscura pseudoobscura GN=Sod PE=3 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 6.757e-32 Identity = 67/115 (58.26%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 112 KGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 KG++ F Q + V G++ GL GLHGFH+H GD TNGC S+GPHFNP K+HGAP+D RH GDLGNI A D VSI D I L G SI+GR VVVHAD DDLGKG Sbjct: 13 KGTVFFEQETSEAPVKVTGEVLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHADADDLGKG 127 The following BLAST results are available for this feature:
BLAST of CX671688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671688 ID=CX671688; Name=CX671688; organism=Citrus sinensis; type=EST; length=705bpback to top |