CX671680

BLAST of CX671680 vs. ExPASy Swiss-Prot
Match: RPOD_LEPIN (RNA polymerase sigma factor rpoD OS=Leptospira interrogans GN=rpoD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.084e-16
Identity = 46/141 (32.62%), Postives = 81/141 (57.45%), Query Frame = 2

Query:  377 KTSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISKQLAKATGMKQSKV----DKILCKERE---SQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTI 778
            K  N ++  +E+ +    +K G  ++E R+ +     +E   +++ +  G    ++    +KI+  ERE   +++ ++++   LVVSIA  Y  +G+   DLIQEG+IGL++   +F  ++GYK STY  WWI+QAI R I
Sbjct:  276 KAFNRFIEKNEKLDDI-EVKMGVNIDEVREVIKDIRNNERKLRRMEQEAGSTVQEIKDWGEKIIKGEREISQAKKELVKANLRLVVSIAKRYANRGMHFFDLIQEGNIGLIKAVDKFEYKKGYKFSTYATWWIRQAITRAI 415          

BLAST of CX671680 vs. ExPASy Swiss-Prot
Match: RPOD_LEPIC (RNA polymerase sigma factor rpoD OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=rpoD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.084e-16
Identity = 46/141 (32.62%), Postives = 81/141 (57.45%), Query Frame = 2

Query:  377 KTSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISKQLAKATGMKQSKV----DKILCKERE---SQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTI 778
            K  N ++  +E+ +    +K G  ++E R+ +     +E   +++ +  G    ++    +KI+  ERE   +++ ++++   LVVSIA  Y  +G+   DLIQEG+IGL++   +F  ++GYK STY  WWI+QAI R I
Sbjct:  276 KAFNRFIEKNEKLDDI-EVKMGVNIDEVREVIKDIRNNERKLRRMEQEAGSTVQEIKDWGEKIIKGEREISQAKKELVKANLRLVVSIAKRYANRGMHFFDLIQEGNIGLIKAVDKFEYKKGYKFSTYATWWIRQAITRAI 415          

BLAST of CX671680 vs. ExPASy Swiss-Prot
Match: RPSC_SYNY3 (Probable RNA polymerase sigma-C factor OS=Synechocystis sp. (strain PCC 6803) GN=sigC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.038e-15
Identity = 43/106 (40.57%), Postives = 69/106 (65.09%), Query Frame = 2

Query:  464 KTVAQAEEH-ESISKQLAKATGMKQSKVDKILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTI 778
            +TVA  ++  +S  K+ A+  G+   +++ I  +   ++  +I++   LVVS+A  YQ +GL L DLIQEG++GL R  ++F+P +GY+ STY YWWI+Q I R I
Sbjct:  128 QTVATLKQTLKSGKKRWAELAGLTVEELENIEKQGITAKAHMIKANLRLVVSVAKKYQNRGLELLDLIQEGTLGLERAVEKFDPTKGYRFSTYSYWWIRQGITRAI 233          

BLAST of CX671680 vs. ExPASy Swiss-Prot
Match: RPOD_COXBU (RNA polymerase sigma factor rpoD OS=Coxiella burnetii GN=rpoD PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.038e-15
Identity = 44/115 (38.26%), Postives = 68/115 (59.13%), Query Frame = 2

Query:  434 KEGAKLEEARKTVAQAEEHESISKQLAKATGMKQSKVDKILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTI 778
            K   ++  A++ +AQ EE  +++ Q  K    + +  +    K R +++ +I +   LV+SIA  Y  +GL   DLIQEG+IGL++   +F   RGYK STY  WWI+QAI R+I
Sbjct:  415 KYSKEIYRAQRNLAQLEEQNNLNIQEIKEINRRVAIGE---AKSRRAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSI 526          

BLAST of CX671680 vs. ExPASy Swiss-Prot
Match: RPOD_CHLTR (RNA polymerase sigma factor rpoD OS=Chlamydia trachomatis GN=rpoD PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.355e-15
Identity = 48/152 (31.58%), Postives = 83/152 (54.61%), Query Frame = 2

Query:  338 KENGELDYNLVKCKTSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISKQLAKATGMKQSKVD-----KILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTI 778
            + N   D+  V  K  + +L   ++     +  E  K   A+   A+ + H+   +++A    +++ K D     + + K +E+++ ++ S   LV+SIA  Y  +GLS  DLIQEG++GL++  ++F   RGYK STY  WWI+QA+ R I
Sbjct:  237 RHNVTEDFGEVVFKAYDSFLQLEQQINDLKARAERNKFAAAKLAAARRKLHK---REVAAGRTLEEFKKDVRMLQRWMDKSQEAKKEMVESNLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAVTRAI 385          

BLAST of CX671680 vs. ExPASy Swiss-Prot
Match: RPOD_BUCAP (RNA polymerase sigma factor rpoD OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpoD PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 2

Query:  446 KLEEARKTVAQAEEHESISKQLAKATGMKQSKVDKIL-------CKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTI 778
            KLEE ++ V  + +     KQ+ K TG+   +V  I         K + +++ ++ +   LV+SIA  Y  +GL   DLIQEG+IGL++   +F   RGYK STY  WWI+QAI R+I
Sbjct:  333 KLEEIKEKVFSSMKK---LKQIEKETGLTIEQVKDINKRMSIGEAKAKRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSI 447          

BLAST of CX671680 vs. ExPASy Swiss-Prot
Match: RPOD4_SYNE7 (RNA polymerase sigma factor rpoD4 OS=Synechococcus elongatus (strain PCC 7942) GN=rpoD4 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 42/107 (39.25%), Postives = 64/107 (59.81%), Query Frame = 2

Query:  479 AEEHESISKQ-------LAKATGMKQSKVDKILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTI 778
            AEE   +S++       L        S+   +L   + ++ +++++   LVVS+A  YQ +GL L DLIQEGS+GL R  ++F+P  GYK STY YWWI+Q++ R I
Sbjct:   36 AEEEVELSRKVQLMMALLENPDAESNSENQAVLQAGQRAKTKMLKANLRLVVSVAKKYQNQGLELLDLIQEGSLGLERAVEKFDPALGYKFSTYAYWWIRQSMTRAI 142          

BLAST of CX671680 vs. ExPASy Swiss-Prot
Match: RPOD_CHLMU (RNA polymerase sigma factor rpoD OS=Chlamydia muridarum GN=rpoD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.726e-15
Identity = 45/113 (39.82%), Postives = 68/113 (60.18%), Query Frame = 2

Query:  443 AKLEEARKTVAQAEEHESIS-KQLAKATGMKQSKVDKILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTI 778
            AKL  AR+ + + E     + ++  K   M Q  +DK     +E+++ ++ S   LV+SIA  Y  +GLS  DLIQEG++GL++  ++F   RGYK STY  WWI+QA+ R I
Sbjct:  277 AKLAAARRKLYKREVAAGRTLEEFKKDVRMLQRWMDK----SQEAKKEMVESNLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAVTRAI 385          

BLAST of CX671680 vs. ExPASy Swiss-Prot
Match: RPOD_RHOCA (RNA polymerase sigma factor rpoD OS=Rhodobacter capsulatus GN=rpoD PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.785e-15
Identity = 51/155 (32.90%), Postives = 84/155 (54.19%), Query Frame = 2

Query:  326 DFLDKENG-ELD---YNLVKCKTSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISKQLAKATGMKQSKVDKILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTI 778
            +F+D+  G ELD    + +  K +  ++T  E        K   K+E+ R  +AQ  ++  +     +    +  K +K   + R++++ ++ +   LV+SIA  Y  +GL   DLIQEG+IGL++   +F   RGYK STY  WWI+QAI R+I
Sbjct:  361 EFIDEYRGYELDPTWMDRMSAKPARAWVTLFE--------KSRDKVEDLRHEMAQVGQYVGVDISEFRRIVNQVQKGEK---EARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSI 504          

BLAST of CX671680 vs. ExPASy Swiss-Prot
Match: HRDA_STRCO (RNA polymerase principal sigma factor hrdA OS=Streptomyces coelicolor GN=hrdA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.147e-14
Identity = 35/79 (44.30%), Postives = 57/79 (72.15%), Query Frame = 2

Query:  542 VDKILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTI 778
            +D+++   R ++ R+I +   LVVS+A  Y G+GL++ DL+QEG++GL+R  ++F+  RGYK STY  WWI+QA+ R +
Sbjct:  149 LDRLVVLGRLAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRAL 227