CX671670

Overview
NameCX671670
Unique NameCX671670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5082 contig Csv1_Contig5082:380..1226. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: NEK6_MOUSE (Serine/threonine-protein kinase Nek6 OS=Mus musculus GN=Nek6 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 74/263 (28.14%), Postives = 132/263 (50.19%), Query Frame = 3
Query:   36 SPFFICFFMMPAVNSDPSDKDSEPFIETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLRE----YRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG-KSHSAHSMLGTPEFMAPE-LYDEDYTELVDIYSFGMCVLEMVTLEIP-YSECDNVAKIYKKVSSGQRP 803
            SP  +C  + PA   DP    +             +  + +G G   +VY+A    +   VA  +V++    D  A  +    E+ LLK L + NII   Y+    + N LN + E+  +G+L +    ++K+ R +  + + K+  Q+   + ++H+    V+HRD+  +NVF+   TG VK+GDLG+      ++ +AHS++GTP +M+PE +++  Y    DI+S G  + EM  L+ P Y +  N+  + +K+     P
Sbjct:   13 SPNHLCHALGPAPPPDPQRLPNTLSFRCSLADF--QIEKKIGRGQFSEVYKATCLLDRKTVALKKVQIFEMMDAKAR-QDCVKEIGLLKQLNHPNIIK--YLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITA-TGIVKLGDLGLGRFFSSETTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYP 267          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: NEK6_HUMAN (Serine/threonine-protein kinase Nek6 OS=Homo sapiens GN=NEK6 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 67/223 (30.04%), Postives = 120/223 (53.81%), Query Frame = 3
Query:  156 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLRE----YRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG-KSHSAHSMLGTPEFMAPE-LYDEDYTELVDIYSFGMCVLEMVTLEIP-YSECDNVAKIYKKVSSGQRP 803
            +G G   +VY+A    +   VA  +V++    D  A  +    E+ LLK L + NII   Y+    + N LN + E+  +G+L +    ++K+ R +  + + K+  Q+   + ++H+    V+HRD+  +NVF+   TG VK+GDLG+      ++ +AHS++GTP +M+PE +++  Y    DI+S G  + EM  L+ P Y +  N+  + +K+     P
Sbjct:   51 IGRGQFSEVYKATCLLDRKTVALKKVQIFEMMDAKAR-QDCVKEIGLLKQLNHPNIIK--YLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSETTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYP 267          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: BYR2_SCHPO (Protein kinase byr2 OS=Schizosaccharomyces pombe GN=byr2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 64/221 (28.96%), Postives = 117/221 (52.94%), Query Frame = 3
Query:  153 LLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDP----AMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAH-------SMLGTPEFMAPELYDED-YTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYK 779
            L+GSG+  +VY   +   G  +A  QV L +  +       +++ L  E+ LL+ L++++I+   Y+  + + + LN   E    G++      +       +K + KQ LKGL YLH+    ++HRD+  +N+ V+ N G++KI D G++  +  + ++        S  G+  +MAPE+  +  +TE  DI+S G  V+EM+T + PY  CD +  I++
Sbjct:  399 LIGSGSFGQVYLGMNASSGELMAVKQVILDSVSESKDRHAKLLDALAGEIALLQELSHEHIVQ--YLGSNLNSDHLNIFLEYVPGGSVAGLLTMYGSFEETLVKNFIKQTLKGLEYLHSRG--IVHRDIKGANILVD-NKGKIKISDFGISKKLELNSTSTKTGGARPSFQGSSFWMAPEVVKQTMHTEKTDIWSLGCLVIEMLTSKHPYPNCDQMQAIFR 614          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: PLK4_MOUSE (Serine/threonine-protein kinase PLK4 OS=Mus musculus GN=Plk4 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19
Identity = 64/218 (29.36%), Postives = 111/218 (50.92%), Query Frame = 3
Query:  141 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAH-SMLGTPEFMAPELYDEDYTEL-VDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKV 785
            +   LLG G+   VYRA     G+EVA   +  +       M++R+ +EV++   L + +++ L+  +  ED N +  + E+C +G +  Y K   +  S +  + +  QI+ G+ YLH+H   ++HRDL  SN+ +  N   +KI D G+A  +   H  H ++ GTP +++PE+       L  DI+S G C+   + +  P  + D V     KV
Sbjct:   13 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQNEVKIHCQLKHPSVLELYNYF--EDNNYVYLVLEMCHNGEMNRYLKNRMKPFSEREARHFMHQIITGMLYLHSHG--ILHRDLTLSNILLTRNM-NIKIADFGLATQLNMPHEKHYTLCGTPNYISPEIATRSAHGLESDIWSLG-CMFYTLLIGRPPFDTDTVKNTLNKV 223          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: NEK6_PIG (Serine/threonine-protein kinase Nek6 OS=Sus scrofa GN=NEK6 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19
Identity = 67/223 (30.04%), Postives = 120/223 (53.81%), Query Frame = 3
Query:  156 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLRE----YRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG-KSHSAHSMLGTPEFMAPE-LYDEDYTELVDIYSFGMCVLEMVTLEIP-YSECDNVAKIYKKVSSGQRP 803
            +G G   +VY+A    +   VA  +V++    D  A  +    E+ LLK L + NII   Y+    + N LN + E+  +G+L +    ++K+ R +  + + K+  Q+   + ++H+    V+HRD+  +NVF+   TG VK+GDLG+      ++ +AHS++GTP +M+PE +++  Y    DI+S G  + EM  L+ P Y +  N+  + +K+     P
Sbjct:   51 IGRGQFSEVYKATCLLDRKTVALKKVQIFEMMDAKAR-QDCVKEIGLLKQLNHPNIIK--YLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITA-TGIVKLGDLGLGRFFSSETTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYP 267          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: M3K3_ARATH (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19
Identity = 75/255 (29.41%), Postives = 124/255 (48.63%), Query Frame = 3
Query:  105 PFIETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAM----IERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV---GKSHSAHSMLGTPEFMAPE-LYDEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIKDPEVKEF 845
            P  E  P+ R+ R  EL+G GA  +VY   + + G  +A  QV +             I  L  EV+LLK L++ NI+   Y+    + ++LN + E    G++    +K        +  ++KQ+L GL YLH +   ++HRD+  +N+ V+ N G +++ D G +  V      + A SM GTP +MAPE +    ++   DI+S G  V+EM T + P+SE          +   +    + +   PE K+F
Sbjct:   58 PRKEEAPSIRW-RKGELIGCGAFGRVYMGMNLDSGELLAIKQVLIAPSSASKEKTQGHIRELEEEVQLLKNLSHPNIV--RYLGTVRESDSLNILMEFVPGGSISSLLEKFGSFPEPVIIMYTKQLLLGLEYLHNNG--IMHRDIKGANILVD-NKGCIRLADFGASKKVVELATVNGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSEQYQQFAAVLHIGRTKAHPPIPEDLSPEAKDF 306          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: YSK4_HUMAN (SPS1/STE20-related protein kinase YSK4 OS=Homo sapiens GN=YSK4 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 83/243 (34.16%), Postives = 120/243 (49.38%), Query Frame = 3
Query:   78 SDPSDKDSEPFIETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIE--RLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA-----AIVGKSHS--AHSMLGTPEFMAPELYDED-YTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIY 776
            S+ S K  EP + T          E+LG GA   VY     + G  +A  QV L T     A  E  +L  EV LLK L + NI++  Y+      NT++   E    G++     +   +      K++KQIL+G+ YL  HE CV+HRD+  +NV +   TG +K+ D G A     A +  +HS    SM GTP +MAPE+ +E  Y    DI+S G  V EM T + P +  D +A ++
Sbjct: 1049 SENSLKSEEPILWTK--------GEILGKGAYGTVYCGLTSQ-GQLIAVKQVALDTSNKLAAEKEYRKLQEEVDLLKALKHVNIVA--YLGTCLQENTVSIFMEFVPGGSISSIINRFGPLPEMVFCKYTKQILQGVAYL--HENCVVHRDIKGNNVMLM-PTGIIKLIDFGCARRLAWAGLNGTHSDMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRMAAMF 1277          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: MKKA_DICDI (Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 62/219 (28.31%), Postives = 114/219 (52.05%), Query Frame = 3
Query:  150 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFS---EVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA-AIVGKSHSAHSMLGTPEFMAPELYDE-DYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSS 791
            ++LG G    VY   +++ G   A  Q+++     DP +   + S   E+ ++++L + NI+   Y+    D++ L+   E    G++     K    S   +K ++KQIL+GL++LH +   +IHRD+  +N+ ++   G VK+ D G + +  G      SM GTP +MAPE+  +  +    DI+S G  ++EM T + P+S    +A +   ++S
Sbjct:  174 QILGRGGYGSVYLGLNKDTGELFAVKQLEIVDINSDPKLKNMILSFSKEIEVMRSLRHDNIV--RYLGTSLDQSFLSVFLEYIPGGSISSLLGKFGAFSENVIKVYTKQILQGLSFLHANS--IIHRDIKGANILID-TKGIVKLSDFGCSKSFSGIVSQFKSMQGTPYWMAPEVIKQTGHGRSSDIWSLGCVIVEMATAQPPWSNITELAAVMYHIAS 387          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: PAKH_DICDI (Serine/threonine-protein kinase pakH OS=Dictyostelium discoideum GN=pakH-1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 67/230 (29.13%), Postives = 117/230 (50.87%), Query Frame = 3
Query:  150 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAHSMLGTPEFMAPELYDE-DYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIKDPE 833
            E LG G+   VYRA  +     +A  + ++    D    +E +  E+++LK   N  ++S  Y      +N    + + C+  +  +  +   +    K +    +Q L GL YLH+ +  +IHRD+  +N+ ++  TGQVKI D GV+  +  + S  S+ GTP +MAPE+ ++ DY   +D++S G+  +E+   E P SE + +  +Y     G+RP      KDP+
Sbjct:   46 EKLGEGSFGSVYRAIHKSSNTSIAIKEFEIFEAND----VEPISKEIQILKKCNNPYVVS--YFGSIMLKNKYWILMDYCSLSSFNDIMQSIGKTFKEKEISLILQQSLLGLVYLHSKQ--IIHRDIKSANILLD-ETGQVKIADFGVSQQIQSTFSKGSIAGTPYWMAPEILNQTDYNNKIDVWSLGIVAIELADGEPPLSEVNPMRAMY---MIGRRPPP--TFKDPK 261          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: PLK4_RAT (Serine/threonine-protein kinase PLK4 OS=Rattus norvegicus GN=Plk4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.549e-18
Identity = 64/218 (29.36%), Postives = 110/218 (50.46%), Query Frame = 3
Query:  141 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAH-SMLGTPEFMAPELYDEDYTEL-VDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKV 785
            +   LLG G+   VYRA     G+EVA   +  +       M++R+ +EV++   L + +++ L+  +  ED N +  + E+C +G +  Y K   +  S    + +  QI+ G+ YLH+H   ++HRDL  SN+ +  N   +KI D G+A  +   H  H ++ GTP +++PE+       L  DI+S G C+   + +  P  + D V     KV
Sbjct:   13 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQNEVKIHCQLKHPSVLELYNYF--EDNNYVYLVLEMCHNGEMNRYLKNRMKPFSESEARHFMHQIITGMLYLHSHG--ILHRDLTLSNILLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDIWSLG-CMFYTLLIGRPPFDTDTVKNTLNKV 223          
The following BLAST results are available for this feature:
BLAST of CX671670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NEK6_MOUSE6.708e-1928.14Serine/threonine-protein kinase Nek6 OS=Mus muscul... [more]
NEK6_HUMAN6.708e-1930.04Serine/threonine-protein kinase Nek6 OS=Homo sapie... [more]
BYR2_SCHPO6.708e-1928.96Protein kinase byr2 OS=Schizosaccharomyces pombe G... [more]
PLK4_MOUSE8.760e-1929.36Serine/threonine-protein kinase PLK4 OS=Mus muscul... [more]
NEK6_PIG8.760e-1930.04Serine/threonine-protein kinase Nek6 OS=Sus scrofa... [more]
M3K3_ARATH8.760e-1929.41Mitogen-activated protein kinase kinase kinase 3 O... [more]
YSK4_HUMAN1.494e-1834.16SPS1/STE20-related protein kinase YSK4 OS=Homo sap... [more]
MKKA_DICDI1.494e-1828.31Mitogen-activated protein kinase kinase kinase A O... [more]
PAKH_DICDI1.952e-1829.13Serine/threonine-protein kinase pakH OS=Dictyostel... [more]
PLK4_RAT2.549e-1829.36Serine/threonine-protein kinase PLK4 OS=Rattus nor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D11-H22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671670 ID=CX671670; Name=CX671670; organism=Citrus sinensis; type=EST; length=847bp
CTGTGAACTGCTTTTTCGCAAATAAAGCTTCCGCTTCTCCATTCTTTATT
TGCTTTTTCATGATGCCGGCTGTTAACTCGGATCCATCCGACAAAGACTC
CGAGCCGTTTATAGAGACCGACCCCACCGGCCGATACGGCCGATACAACG
AACTACTTGGCTCCGGCGCCGTGAAGAAAGTGTACCGAGCATTTGATCAA
GAAGAGGGCATAGAAGTTGCATGGAATCAAGTGAAGCTAAGAACCTTCTG
CGACGATCCGGCGATGATCGAAAGGCTCTTCTCGGAAGTCCGTTTGCTGA
AAACCCTAGCCAACAAGAACATAATCTCCTTGCACTACGTGTGGCGCGAC
GAGGATCGCAACACATTGAATTTCATCACCGAAGTCTGCACTTCCGGTAA
CTTGAGAGAGTACCGGAAAAAGCACCGGCATGTTTCCGTGAAGGCGCTCA
AGAAATGGTCAAAGCAAATCTTGAAGGGGTTGAATTATTTGCACACGCAC
GAGCCTTGTGTCATTCATAGGGATCTCAATTGTAGCAACGTTTTCGTCAA
CGGAAACACTGGCCAGGTTAAGATCGGTGATCTCGGGGTGGCGGCGATAG
TGGGAAAGAGCCATTCGGCGCATTCGATGCTGGGGACGCCGGAGTTCATG
GCGCCGGAGCTGTACGATGAGGATTACACGGAGCTTGTGGACATATACTC
GTTTGGGATGTGCGTGCTAGAGATGGTGACGTTGGAGATACCTTACAGCG
AATGCGACAATGTGGCCAAAATTTACAAGAAGGTGTCGTCTGGGCAGAGG
CCTGATGCATTGAACAAGATTAAGGATCCAGAGGTAAAGGAGTTCAT
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