CX671664

Overview
NameCX671664
Unique NameCX671664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13580 contig Csv1_Contig13580:448..1247. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.767e-19
Identity = 49/123 (39.84%), Postives = 78/123 (63.41%), Query Frame = -1
Query:  393 KRPKDNNTKAKVSRF-YVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGNPIHVSAASSMLSAS 758
            K  K N  KA+ +RF ++  SD ++   + DGY+WRKYGQK  +++P PR+Y++C+    C VKK+V+RS++DPSI++ TYEG+H HP P   +        H+  + +PI    A++  S+S
Sbjct:  195 KAKKKNQKKAREARFAFLTKSDIDN---LDDGYRWRKYGQKAVKNSPYPRSYYRCTTV-GCGVKKRVERSSDDPSIVMTTYEGQHTHPFPMTPR-------GHIGMLTSPILDHGATTASSSS 306          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK36_ARATH (Probable WRKY transcription factor 36 OS=Arabidopsis thaliana GN=WRKY36 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.164e-19
Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = -1
Query:  330 TKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQR-SAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATI---GNPIHVSAASSMLS--------------ASPTATLDMIQPGF---LFDDAKKSS 737
            T  K +R  V+AS  + +  + DG QWRKYGQK  + NP PRAY++CS + +CPV+K+VQR   E+ S  + TYEG H+HP P ++ + ++   S  A++   G+    S+ S+ LS              + PT TLD+ +P +   L DD   SS
Sbjct:  184 TGLKKTRVCVKASCEDPS--INDGCQWRKYGQKTAKTNPLPRAYYRCSMSSNCPVRKQVQRCGEEETSAFMTTYEGNHDHPLPMEA-SHMAAGTSAAASLLQSGSSSSSSSTSASLSYFFPFHHFSISTTNSHPTVTLDLTRPNYPNQLPDDYPLSS 337          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.901e-18
Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = -1
Query:  477 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKA 680
            I+ DGY+WRKYGQKV R NP+PR+Y+KC+ A  CPV+K V+R++ DP  ++ TYEG+H+H  PT   +
Sbjct:  379 ILDDGYRWRKYGQKVVRGNPNPRSYYKCT-AHGCPVRKHVERASHDPKAVITTYEGKHDHDVPTSKSS 445          

HSP 2 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = -1
Query:  492 SNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQP 695
            S  +++  DGY WRKYGQK  + +  PR+Y+KC+  P+C VKK  +RS  D  I    Y+G H+HP+P
Sbjct:  204 STPSILADDGYNWRKYGQKHVKGSEFPRSYYKCTH-PNCEVKKLFERS-HDGQITDIIYKGTHDHPKP 269          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.163e-17
Identity = 36/82 (43.90%), Postives = 59/82 (71.95%), Query Frame = -1
Query:  432 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGNP 677
            ++DGY+WRKYGQK  +++P PR+Y++C+    C VKK+V+RS +DP++++ TYEG+HNHP PT+ +   + +    A +  P
Sbjct:  171 LEDGYRWRKYGQKAVKNSPYPRSYYRCT-TQKCNVKKRVERSFQDPTVVITTYEGQHNHPIPTNLRGSSAAAAMFSADLMTP 251          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17
Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = -1
Query:  453 PKDNNTKAKVSRFYVRA-----------SDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSH 752
            PK  NT+ +VS     +             ++   ++ DGY+WRKYGQKV + NP PR+Y+KC+  P C V+K V+R+A DP  +V TYEG+HNH  P    +   L P++
Sbjct:  378 PKRRNTEVRVSEPVASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCT-TPDCGVRKHVERAATDPKAVVTTYEGKHNHDVPAARTSSHQLRPNN 487          

HSP 2 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = -1
Query:  492 AKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQP 731
            +++S F  R+   N+     DGY WRKYGQK  + +  PR+Y+KC+  P+CPVKKKV+RS  D  +    Y+G+HNH  P
Sbjct:  231 SEISVFEHRSQPQNADKPADDGYNWRKYGQKQVKGSDFPRSYYKCTH-PACPVKKKVERSL-DGQVTEIIYKGQHNHELP 308          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17
Identity = 41/103 (39.81%), Postives = 67/103 (65.05%), Query Frame = -1
Query:  369 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGNPIHVSAASSMLSASPTATLDMI 677
            ++DGY+WRKYGQK  +++P PR+Y++C+    C VKK+V+RS +DPSI++ TYEG+HNHP P+  +   +++  H+      +H     S+L + P    D +
Sbjct:  135 LEDGYRWRKYGQKAVKNSPYPRSYYRCT-TQKCNVKKRVERSFQDPSIVITTYEGKHNHPIPSTLRG--TVAAEHLL-----VHRGGGGSLLHSFPRHHQDFL 229          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.590e-17
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = -1
Query:  378 PKDNNTKAKVSRFYVRASDSNST---LIVK---------DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGNPIHVSAASSMLSASPTATL 752
            PK  +T+ ++S     AS    T   +IV+         DGY+WRKYGQKV + NP PR+Y+KC+  P C V+K V+R+A DP  +V TYEG+HNH  P    +  + + + +     P  ++  +      P A L
Sbjct:  371 PKRRSTEVRISEPAPAASHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCT-TPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPAAKSSSHAAAAAQLRPDNRPGGLANLNQQQQQQPVARL 506          

HSP 2 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = -1
Query:  381 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGNPIHVSAASSMLSASPTAT 671
            DGY WRKYGQK  + +  PR+Y+KC+  P CPVKKKV+RS  D  +    Y+G+HNH  P ++K     + +++   G+ I+ +  SS L AS   T
Sbjct:  230 DGYNWRKYGQKQVKGSEFPRSYYKCT-NPGCPVKKKVERSL-DGQVTEIIYKGQHNHEPPQNTKRGNKDNTANIN--GSSINNNRGSSELGASQFQT 322          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRKY1_ARATH (WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.770e-17
Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = -1
Query:  492 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQP 680
            IV DGY+WRKYGQK  + +P PR+Y++CS +P CPVKK V+RS+ D  +L+ TYEG+H+H  P
Sbjct:  305 IVNDGYRWRKYGQKSVKGSPYPRSYYRCS-SPGCPVKKHVERSSHDTKLLITTYEGKHDHDMP 366          

HSP 2 Score: 68.1662 bits (165), Expect = 6.179e-11
Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = -1
Query:  492 KRPKDNNTKAKVSRFYVRASDSNSTLI----VKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQP 758
            K PK + +   +S      S+ NS  I    ++DGY WRKYGQK+ + N   R+Y++C+  P+C  KK+++RSA    ++   Y GEH+HP+P
Sbjct:   81 KAPKVSESSGALS--LQSGSEGNSPFIREKVMEDGYNWRKYGQKLVKGNEFVRSYYRCTH-PNCKAKKQLERSA-GGQVVDTVYFGEHDHPKP 169          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.770e-17
Identity = 50/156 (32.05%), Postives = 84/156 (53.85%), Query Frame = -1
Query:  252 SDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGNPIHVSAASSMLSASPTATLDMIQPGFLFDDAKKSSVQQ------IEAPAIHQILVQQMASNLTKDPN 701
            S S+  ++  D + WRKYGQK  + +P PR Y++CS +  C  +K+V+RS  DP++LV TY  EHNHP PT   A   L+ S  ++  + ++ S+ SS  +A+ + +  + Q     D+   S++         +A AI +  V++    +  D N
Sbjct:  206 SRSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNA---LAGSTRSSSSSSLNPSSKSSTAAATTSPSSRVFQNNSSKDEPNNSNLPSSSTHPPFDAAAIKEENVEERQEKMEFDYN 358          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.536e-17
Identity = 33/69 (47.83%), Postives = 54/69 (78.26%), Query Frame = -1
Query:  471 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAEL 677
            ++DGY+WRKYGQK  +++P PR+Y++C+    C VKK+V+RS +DP++++ TYE +HNHP PT+ +  +
Sbjct:  182 LEDGYRWRKYGQKAVKNSPYPRSYYRCT-TQKCNVKKRVERSYQDPTVVITTYESQHNHPIPTNRRTAM 249          
The following BLAST results are available for this feature:
BLAST of CX671664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK48_ARATH2.767e-1939.84Probable WRKY transcription factor 48 OS=Arabidops... [more]
WRK36_ARATH6.164e-1937.58Probable WRKY transcription factor 36 OS=Arabidops... [more]
WRK20_ARATH8.901e-1854.41Probable WRKY transcription factor 20 OS=Arabidops... [more]
WRK28_ARATH1.163e-1743.90Probable WRKY transcription factor 28 OS=Arabidops... [more]
WRKY3_ARATH1.518e-1739.64Probable WRKY transcription factor 3 OS=Arabidopsi... [more]
WRK71_ARATH1.518e-1739.81Probable WRKY transcription factor 71 OS=Arabidops... [more]
WRKY4_ARATH2.590e-1735.77Probable WRKY transcription factor 4 OS=Arabidopsi... [more]
WRKY1_ARATH5.770e-1757.14WRKY transcription factor 1 OS=Arabidopsis thalian... [more]
WRK35_ARATH5.770e-1732.05Probable WRKY transcription factor 35 OS=Arabidops... [more]
WRKY8_ARATH7.536e-1747.83Probable WRKY transcription factor 8 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D08-H16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671664 ID=CX671664; Name=CX671664; organism=Citrus sinensis; type=EST; length=800bp
TTTTTTAAAAGGGAAAAATTCTCCTTTTTCGTTAATTTTGAAGTTCCATG
TAATGTACATTAATATTGCAAGGTATGGTCTCCAGACTCTAATCCTCCAT
TAAAGTAACTAAAGCAAAGCAAAAATACAGAAGTTGATACAAATTAACAT
CCATAATCTGTGTTGATCCTGGCTAGCTAGAGTGACCATCTTTGTGTTCG
GGCCTGATCAGCAAATCTTCCTGAAATAGCTGCTGCAAGTGCTGCTGTAA
AATTAGGATCTTTGGTCAAATTAGAAGCCATTTGTTGGACCAAAATCTGA
TGGATTGCTGGAGCTTCAATTTGTTGAACTGATGATTTTTTGGCATCATC
AAACAAAAATCCAGGTTGAATCATATCAAGAGTTGCAGTAGGGCTTGCTG
ATAGCATCGATGACGCCGCAGAAACATGAATAGGATTTCCAATAGTTGCA
ACATGGCTAGGGCTCAATGATAATTCAGCTTTTGAATCCGTAGGCTGAGG
ATGATTATGCTCTCCTTCATAAGTTGCCACTAAAATTGATGGATCCTCAG
CACTTCTTTGCACCTTCTTCTTTACGGGACAGCTTGGGGCGAAAGAACAC
TTGAAGTAAGCCCTAGGTGATGGGTTGTCTCTTGTAACCTTTTGGCCATA
CTTTCTCCATTGATACCCATCCTTCACAATCAGGGTTGAATTTGAATCAC
TGGCTCTCACATAAAACCTAGAAACTTTTGCCTTGGTGTTGTTATCCTTT
GGCCTTTTGCATGACTCTTCGTCAGTACTAGTGCTGGACTCAGTAGCGTG
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