CX671664

Overview
NameCX671664
Unique NameCX671664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13580 contig Csv1_Contig13580:448..1247. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK21_ARATH (Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.088e-15
Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = -1
Query:  495 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQ 680
            I  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R  EDP++L+ TYE EHNHP+
Sbjct:  311 IPPDDYSWRKYGQKPIKGSPYPRGYYKCSSMRGCPARKHVERCLEDPAMLIVTYEAEHNHPK 372          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK58_ARATH (Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.421e-15
Identity = 33/63 (52.38%), Postives = 48/63 (76.19%), Query Frame = -1
Query:  492 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQP 680
            ++ DGY+WRKYGQKV + NP PR+Y+KC+  P+C V+K V+R++ D   ++ TYEG+HNH  P
Sbjct:  304 LLDDGYRWRKYGQKVVKGNPHPRSYYKCT-TPNCTVRKHVERASTDAKAVITTYEGKHNHDVP 365          

HSP 2 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = -1
Query:  480 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSK 671
            DGY WRKYGQK  +    PR+Y+KC+   +CPVKKKV+RS+ D  I    Y+G+H+H +P + +
Sbjct:  168 DGYNWRKYGQKPIKGCEYPRSYYKCTHV-NCPVKKKVERSS-DGQITQIIYKGQHDHERPQNRR 229          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.421e-15
Identity = 34/63 (53.97%), Postives = 48/63 (76.19%), Query Frame = -1
Query:  492 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQP 680
            I+ DGY+WRKYGQKV + NP+PR+Y+KC+    CPV+K V+R++ D   ++ TYEG+HNH  P
Sbjct:  360 ILDDGYRWRKYGQKVVKGNPNPRSYYKCT-TIGCPVRKHVERASHDMRAVITTYEGKHNHDVP 421          

HSP 2 Score: 81.6481 bits (200), Expect = 5.400e-15
Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = -1
Query:  435 KDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGN 674
            +DGY WRKYGQK  + + +PR+Y+KC+F P+CP KKKV+RS E   I    Y+G HNHP+P  ++   S S +  + + N
Sbjct:  184 EDGYNWRKYGQKQVKGSENPRSYYKCTF-PNCPTKKKVERSLEG-QITEIVYKGSHNHPKPQSTRRSSSSSSTFHSAVYN 261          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK10_ARATH (Probable WRKY transcription factor 10 OS=Arabidopsis thaliana GN=WRKY10 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.421e-15
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = -1
Query:  390 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGNPIHVSAASSMLSASP 671
            DGY+WRKYGQKV + NP+PR+YFKC+    C VKK V+R A++  ++V TY+G HNHP P   ++  S S +  A    P + +  +S L  +P
Sbjct:  308 DGYRWRKYGQKVVKGNPNPRSYFKCTNI-ECRVKKHVERGADNIKLVVTTYDGIHNHPSPPARRSN-SSSRNRSAGATIPQNQNDRTSRLGRAP 399          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.166e-15
Identity = 38/87 (43.68%), Postives = 62/87 (71.26%), Query Frame = -1
Query:  501 KRPKDNNTKAKVSRF-YVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNH 758
            K  K    + +  RF ++  SD ++   ++DGY+WRKYGQK  +++P PR+Y++C+ +  C VKK+V+RS++DPSI++ TYEG+H H
Sbjct:  121 KEKKKAQKRIRQPRFAFMTKSDVDN---LEDGYRWRKYGQKAVKNSPFPRSYYRCTNS-RCTVKKRVERSSDDPSIVITTYEGQHCH 203          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK15_ARATH (Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.166e-15
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = -1
Query:  501 VRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNH 710
            V A  +  + +  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R+A+D S+L+ TYEG+HNH
Sbjct:  228 VPAISAKMSDVPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNH 297          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK25_ARATH (Probable WRKY transcription factor 25 OS=Arabidopsis thaliana GN=WRKY25 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.135e-15
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = -1
Query:  489 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPT 680
            ++ DG++WRKYGQKV + N +PR+Y+KC+F   C VKK+V+RSA D   ++ TYEG HNH  PT
Sbjct:  326 VLIDGFRWRKYGQKVVKGNTNPRSYYKCTF-QGCGVKKQVERSAADERAVLTTYEGRHNHDIPT 388          

HSP 2 Score: 70.4774 bits (171), Expect = 1.245e-11
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = -1
Query:  480 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSK 671
            DGY WRKYGQK  + + +PR+YFKC++ P C V KK+  +A D  I    Y+G HNHP+P  +K
Sbjct:  167 DGYGWRKYGQKQVKKSENPRSYFKCTY-PDC-VSKKIVETASDGQITEIIYKGGHNHPKPEFTK 228          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRKY1_MAIZE (Protein WRKY1 OS=Zea mays PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.053e-15
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = -1
Query:  501 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNH 680
            I  D + WRKYGQK  + +P PR Y+KCS    CP +K V+R  +DPS+L+ TYEG+HNH
Sbjct:  330 IPADEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCVDDPSMLIVTYEGDHNH 389          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK74_ARATH (Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.053e-15
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = -1
Query:  477 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKA 680
            I  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R  E+ S+L+ TYEGEHNH +   S++
Sbjct:  260 IPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCVEETSMLIVTYEGEHNHSRILSSQS 327          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK65_ARATH (Probable WRKY transcription factor 65 OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.053e-15
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = -1
Query:  459 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSP 671
            D + WRKYGQK  + +P PR Y++CS    CP +K+V+RS +DP++++ TY  EHNHP P  S       P
Sbjct:   75 DSWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERSRDDPTMILITYTSEHNHPWPLTSSTRNGPKP 145          
The following BLAST results are available for this feature:
BLAST of CX671664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK21_ARATH1.088e-1554.84Probable WRKY transcription factor 21 OS=Arabidops... [more]
WRK58_ARATH1.421e-1552.38Probable WRKY transcription factor 58 OS=Arabidops... [more]
WRK33_ARATH1.421e-1553.97Probable WRKY transcription factor 33 OS=Arabidops... [more]
WRK10_ARATH1.421e-1544.68Probable WRKY transcription factor 10 OS=Arabidops... [more]
WRK57_ARATH3.166e-1543.68Probable WRKY transcription factor 57 OS=Arabidops... [more]
WRK15_ARATH3.166e-1548.57Probable WRKY transcription factor 15 OS=Arabidops... [more]
WRK25_ARATH4.135e-1554.69Probable WRKY transcription factor 25 OS=Arabidops... [more]
WRKY1_MAIZE7.053e-1553.33Protein WRKY1 OS=Zea mays PE=1 SV=1[more]
WRK74_ARATH7.053e-1550.00Probable WRKY transcription factor 74 OS=Arabidops... [more]
WRK65_ARATH7.053e-1545.07Probable WRKY transcription factor 65 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D08-H16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671664 ID=CX671664; Name=CX671664; organism=Citrus sinensis; type=EST; length=800bp
TTTTTTAAAAGGGAAAAATTCTCCTTTTTCGTTAATTTTGAAGTTCCATG
TAATGTACATTAATATTGCAAGGTATGGTCTCCAGACTCTAATCCTCCAT
TAAAGTAACTAAAGCAAAGCAAAAATACAGAAGTTGATACAAATTAACAT
CCATAATCTGTGTTGATCCTGGCTAGCTAGAGTGACCATCTTTGTGTTCG
GGCCTGATCAGCAAATCTTCCTGAAATAGCTGCTGCAAGTGCTGCTGTAA
AATTAGGATCTTTGGTCAAATTAGAAGCCATTTGTTGGACCAAAATCTGA
TGGATTGCTGGAGCTTCAATTTGTTGAACTGATGATTTTTTGGCATCATC
AAACAAAAATCCAGGTTGAATCATATCAAGAGTTGCAGTAGGGCTTGCTG
ATAGCATCGATGACGCCGCAGAAACATGAATAGGATTTCCAATAGTTGCA
ACATGGCTAGGGCTCAATGATAATTCAGCTTTTGAATCCGTAGGCTGAGG
ATGATTATGCTCTCCTTCATAAGTTGCCACTAAAATTGATGGATCCTCAG
CACTTCTTTGCACCTTCTTCTTTACGGGACAGCTTGGGGCGAAAGAACAC
TTGAAGTAAGCCCTAGGTGATGGGTTGTCTCTTGTAACCTTTTGGCCATA
CTTTCTCCATTGATACCCATCCTTCACAATCAGGGTTGAATTTGAATCAC
TGGCTCTCACATAAAACCTAGAAACTTTTGCCTTGGTGTTGTTATCCTTT
GGCCTTTTGCATGACTCTTCGTCAGTACTAGTGCTGGACTCAGTAGCGTG
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