CX671664

Overview
NameCX671664
Unique NameCX671664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13580 contig Csv1_Contig13580:448..1247. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK59_ARATH (Probable WRKY transcription factor 59 OS=Arabidopsis thaliana GN=WRKY59 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.053e-15
Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = -1
Query:  489 SDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPT 701
            S  +  + + DGY+WRKYG+K    +P PR Y KCS +P C VKKK++R   +P  ++ TYEG HNHP P+
Sbjct:  100 SSIDEKVALDDGYKWRKYGKKPITGSPFPRHYHKCS-SPDCNVKKKIERDTNNPDYILTTYEGRHNHPSPS 169          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.212e-15
Identity = 36/77 (46.75%), Postives = 55/77 (71.43%), Query Frame = -1
Query:  450 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHV 680
            ++ DGY+WRKYGQKV ++   PR+Y++C+    C VKK+V+R A+DP +++ TYEG H H  P++   + SLS SH+
Sbjct:  221 VLDDGYRWRKYGQKVVKNTQHPRSYYRCT-QDKCRVKKRVERLADDPRMVITTYEGRHLH-SPSNHLDDDSLSTSHL 295          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK39_ARATH (Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.052e-14
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = -1
Query:  477 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKA 680
            I  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R  ++ S+L+ TYEGEHNH +   S++
Sbjct:  260 IPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCIDETSMLIVTYEGEHNHSRILSSQS 327          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRKY7_ARATH (Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.680e-14
Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = -1
Query:  501 KAKVSRFY-VRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNH 734
            K++V R   V A  S    I  D + WRKYGQK  + +P PR Y+KCS    CP +K V+R+ +D  +L+ TYEG+HNH
Sbjct:  260 KSRVKRVIRVPAVSSKMADIPSDEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNH 338          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK69_ARATH (Probable WRKY transcription factor 69 OS=Arabidopsis thaliana GN=WRKY69 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.572e-14
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = -1
Query:  483 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDS 671
            D + WRKYGQK  + +P PR Y++CS +  CP +K+V+RS  DPS L+ TY  +HNHP P+ S
Sbjct:   71 DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPSKLMITYACDHNHPFPSSS 133          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK32_ARATH (Probable WRKY transcription factor 32 OS=Arabidopsis thaliana GN=WRKY32 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.971e-14
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = -1
Query:  480 KVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSK 728
            K ++F V A+      I  DGY+WRKYGQK+ + NP PR Y++C+ A  CPV+K ++ + E+   ++ TY+G HNH  P   K
Sbjct:  315 KKNKFVVHAAGDVG--ICGDGYRWRKYGQKMVKGNPHPRNYYRCTSA-GCPVRKHIETAVENTKAVIITYKGVHNHDMPVPKK 394          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.798e-14
Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = -1
Query:  498 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHP 680
            I+ DGY+WRKYGQK  ++N  PR+Y++C++   C VKK+VQR   D  ++V TYEG H+HP
Sbjct:   65 ILDDGYRWRKYGQKAVKNNKFPRSYYRCTYG-GCNVKKQVQRLTVDQEVVVTTYEGVHSHP 124          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK49_ARATH (Probable WRKY transcription factor 49 OS=Arabidopsis thaliana GN=WRKY49 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.798e-14
Identity = 35/82 (42.68%), Postives = 57/82 (69.51%), Query Frame = -1
Query:  501 DNNTKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNH 746
            + +T +KV R+ ++  + NS  +  DGY+WRKYGQK  +++P+PR+Y+KC+  P C  KK+V+RS ++ +  + TYEG H H
Sbjct:   91 ERSTLSKVDRYTLKVKN-NSNGMCDDGYKWRKYGQKSIKNSPNPRSYYKCT-NPICNAKKQVERSIDESNTYIITYEGFHFH 170          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK22_ARATH (WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.798e-14
Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = -1
Query:  378 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGNPIHVSAASSMLSASPTATL 671
            D + WRKYGQK  + +P PR Y++CS +  C  +K+V+R+  DP + + TY  EHNHP PT           H  ++        +    S SPT T+
Sbjct:  129 DVWAWRKYGQKPIKGSPYPRGYYRCSTSKGCLARKQVERNRSDPKMFIVTYTAEHNHPAPT-----------HRNSLAGSTRQKPSDQQTSKSPTTTI 215          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK12_ARATH (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.330e-13
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = -1
Query:  453 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSH 680
            ++ DGY+WRKYGQKV +++  PR+Y++C+   +C VKK+V+R +ED  +++ TYEG HNH    D     S SP H
Sbjct:  143 VLDDGYKWRKYGQKVVKNSLHPRSYYRCTH-NNCRVKKRVERLSEDCRMVITTYEGRHNHIPSDD-----STSPDH 212          
The following BLAST results are available for this feature:
BLAST of CX671664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK59_ARATH7.053e-1547.89Probable WRKY transcription factor 59 OS=Arabidops... [more]
WRK13_ARATH9.212e-1546.75Probable WRKY transcription factor 13 OS=Arabidops... [more]
WRK39_ARATH2.052e-1448.53Probable WRKY transcription factor 39 OS=Arabidops... [more]
WRKY7_ARATH2.680e-1445.57Probable WRKY transcription factor 7 OS=Arabidopsi... [more]
WRK69_ARATH4.572e-1450.79Probable WRKY transcription factor 69 OS=Arabidops... [more]
WRK32_ARATH5.971e-1442.17Probable WRKY transcription factor 32 OS=Arabidops... [more]
WRK75_ARATH7.798e-1452.46Probable WRKY transcription factor 75 OS=Arabidops... [more]
WRK49_ARATH7.798e-1442.68Probable WRKY transcription factor 49 OS=Arabidops... [more]
WRK22_ARATH7.798e-1435.71WRKY transcription factor 22 OS=Arabidopsis thalia... [more]
WRK12_ARATH1.330e-1346.05Probable WRKY transcription factor 12 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D08-H16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671664 ID=CX671664; Name=CX671664; organism=Citrus sinensis; type=EST; length=800bp
TTTTTTAAAAGGGAAAAATTCTCCTTTTTCGTTAATTTTGAAGTTCCATG
TAATGTACATTAATATTGCAAGGTATGGTCTCCAGACTCTAATCCTCCAT
TAAAGTAACTAAAGCAAAGCAAAAATACAGAAGTTGATACAAATTAACAT
CCATAATCTGTGTTGATCCTGGCTAGCTAGAGTGACCATCTTTGTGTTCG
GGCCTGATCAGCAAATCTTCCTGAAATAGCTGCTGCAAGTGCTGCTGTAA
AATTAGGATCTTTGGTCAAATTAGAAGCCATTTGTTGGACCAAAATCTGA
TGGATTGCTGGAGCTTCAATTTGTTGAACTGATGATTTTTTGGCATCATC
AAACAAAAATCCAGGTTGAATCATATCAAGAGTTGCAGTAGGGCTTGCTG
ATAGCATCGATGACGCCGCAGAAACATGAATAGGATTTCCAATAGTTGCA
ACATGGCTAGGGCTCAATGATAATTCAGCTTTTGAATCCGTAGGCTGAGG
ATGATTATGCTCTCCTTCATAAGTTGCCACTAAAATTGATGGATCCTCAG
CACTTCTTTGCACCTTCTTCTTTACGGGACAGCTTGGGGCGAAAGAACAC
TTGAAGTAAGCCCTAGGTGATGGGTTGTCTCTTGTAACCTTTTGGCCATA
CTTTCTCCATTGATACCCATCCTTCACAATCAGGGTTGAATTTGAATCAC
TGGCTCTCACATAAAACCTAGAAACTTTTGCCTTGGTGTTGTTATCCTTT
GGCCTTTTGCATGACTCTTCGTCAGTACTAGTGCTGGACTCAGTAGCGTG
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