CX671664

Overview
NameCX671664
Unique NameCX671664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13580 contig Csv1_Contig13580:448..1247. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK45_ARATH (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.737e-13
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = -1
Query:  483 KDNNTKAKVSRFYVRASDSNSTL-IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNH--PQPTDS 749
            K  + K K  R    A  + S + I+ DGY+WRKYGQK  ++NP PR+Y+KC+    C VKK+VQR   D  ++V TY+G H H   +P+D+
Sbjct:   39 KPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKAVKNNPFPRSYYKCT-EEGCRVKKQVQRQWGDEGVVVTTYQGVHTHAVDKPSDN 129          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.737e-13
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = -1
Query:  489 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPT 671
            D + WRKYGQK  + +P PR Y++CS +  C  +K+V+RS  DP+I + TY GEH HP+PT
Sbjct:  166 DLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCLARKQVERSNLDPNIFIVTYTGEHTHPRPT 226          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13
Identity = 37/90 (41.11%), Postives = 54/90 (60.00%), Query Frame = -1
Query:  489 KRPKDNNTKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPT 758
            K  + NN + +V     R S S+      D + WRKYGQK  + +P PR+Y++C+ +  C  +K+V+RS  DP++ V TY  EHNHP PT
Sbjct: 1158 KSRRKNNKEKRVVCVVDRGSRSS------DLWVWRKYGQKPIKSSPYPRSYYRCASSKGCFARKQVERSRTDPNVSVITYISEHNHPFPT 1241          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.055e-13
Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = -1
Query:  489 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPT 671
            DGY WRKYGQK  + +  PR+Y+KC+  P CPVKKKV+RS E   +    Y+GEHNH +P+
Sbjct:  166 DGYNWRKYGQKQVKGSECPRSYYKCTH-PKCPVKKKVERSVEG-QVSEIVYQGEHNHSKPS 224          

HSP 2 Score: 75.0998 bits (183), Expect = 5.055e-13
Identity = 41/106 (38.68%), Postives = 66/106 (62.26%), Query Frame = -1
Query:  441 KRPKDNNTKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATI 758
            ++ +  +++A VS+  V  SDS     ++DG++WRKYGQKV   N  PR+Y++C+ A +C  +K V+R+++DP   + TYEG+HNH         L LSP   +T+
Sbjct:  327 RKNEKQSSEAGVSQGSVE-SDS-----LEDGFRWRKYGQKVVGGNAYPRSYYRCTSA-NCRARKHVERASDDPRAFITTYEGKHNH--------HLLLSPPSSSTL 417          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.601e-13
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = -1
Query:  492 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQP 680
            I+ DGY+WRKYGQKV + NP+PR+Y+KC+ A  C V K V+R+++D   ++ TY G+H H  P
Sbjct:  370 ILDDGYRWRKYGQKVVKGNPNPRSYYKCT-ANGCTVTKHVERASDDFKSVLTTYIGKHTHVVP 431          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.622e-13
Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = -1
Query:  498 KAKVSRFYVRA-SDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHP 734
            K K  RF  R  SD++   I+ DGY+WRKYGQK  +++  PR+Y++C+    C VKK+VQR +++ SI+  TYEG HNHP
Sbjct:   12 KMKNPRFSFRTKSDAD---ILDDGYRWRKYGQKSVKNSLYPRSYYRCT-QHMCNVKKQVQRLSKETSIVETTYEGIHNHP 87          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.299e-12
Identity = 33/90 (36.67%), Postives = 51/90 (56.67%), Query Frame = -1
Query:  489 KRPKDNNTKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPT 758
            K+ K N  K  V +      + N   ++ D + WRKYGQK  + +P PR+Y++CS +  C  +K+V+R+ ++P     TY  EHNH  PT
Sbjct:  113 KKSKKNQQKRVVEQ----VKEEN---LLSDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNPQNPEKFTITYTNEHNHELPT 195          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK51_ARATH (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.245e-11
Identity = 28/60 (46.67%), Postives = 44/60 (73.33%), Query Frame = -1
Query:  501 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNH 680
            ++ DG++WRKYG+K  ++N + R Y+KCS +  C VKK+V+R  +D + ++ TYEG HNH
Sbjct:  108 VMDDGFKWRKYGKKSVKNNINKRNYYKCS-SEGCSVKKRVERDGDDAAYVITTYEGVHNH 166          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK46_ARATH (Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.245e-11
Identity = 58/185 (31.35%), Postives = 84/185 (45.41%), Query Frame = -1
Query:  219 KRPKDNNTKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCS--FAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVAT---IGNPIHVSAASSMLSASPTATLDMIQPGFLFDDAKKSSVQQIEAPAIHQILVQQMASNLTKDPNFTAALAAAISG 758
            KR        KV  F     ++ S   + DG+ WRKYGQK    + +PRAY++C+  F   C   K+VQ+S  DPS+    Y G H     T  K   + S S   T    GN +HV+  S      PT + +++    L D   K ++ +  + + H+I      SNL    NF   L+ A SG
Sbjct:   79 KRKVSEKNTEKVKVFVATEQENGS---IDDGHCWRKYGQKEIHGSKNPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTCNNITSPKTTTNFSVSLTNTNIFEGNRVHVTEQSE--DMKPTKSEEVMIS--LEDLENKKNIFRTFSFSNHEIENGVWKSNLFLG-NFVEDLSPATSG 255          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK52_ARATH (Probable WRKY transcription factor 52 OS=Arabidopsis thaliana GN=WRKY52 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 6.179e-11
Identity = 37/88 (42.05%), Postives = 48/88 (54.55%), Query Frame = -1
Query:  477 KAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCS--FAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKA 734
            K K S   V+   S   +   D + WRKYGQK    +  PR Y++C+  F   C   K+VQRS  D ++L  TY  EHNHP+PT  KA
Sbjct: 1188 KKKHSESRVKKVVSIPAIDEGDLWTWRKYGQKDILGSRFPRGYYRCAYKFTHGCKATKQVQRSETDSNMLAITYLSEHNHPRPTKRKA 1275          
The following BLAST results are available for this feature:
BLAST of CX671664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK45_ARATH1.737e-1343.48Probable WRKY transcription factor 45 OS=Arabidops... [more]
WRK27_ARATH1.737e-1350.82Probable WRKY transcription factor 27 OS=Arabidops... [more]
WRK16_ARATH2.963e-1341.11Probable WRKY transcription factor 16 OS=Arabidops... [more]
WRK44_ARATH5.055e-1354.10WRKY transcription factor 44 OS=Arabidopsis thalia... [more]
WRK34_ARATH6.601e-1350.79Probable WRKY transcription factor 34 OS=Arabidops... [more]
WRK43_ARATH8.622e-1348.75Probable WRKY transcription factor 43 OS=Arabidops... [more]
WRK29_ARATH7.299e-1236.67Probable WRKY transcription factor 29 OS=Arabidops... [more]
WRK51_ARATH1.245e-1146.67Probable WRKY transcription factor 51 OS=Arabidops... [more]
WRK46_ARATH1.245e-1131.35Probable WRKY transcription factor 46 OS=Arabidops... [more]
WRK52_ARATH6.179e-1142.05Probable WRKY transcription factor 52 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D08-H16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671664 ID=CX671664; Name=CX671664; organism=Citrus sinensis; type=EST; length=800bp
TTTTTTAAAAGGGAAAAATTCTCCTTTTTCGTTAATTTTGAAGTTCCATG
TAATGTACATTAATATTGCAAGGTATGGTCTCCAGACTCTAATCCTCCAT
TAAAGTAACTAAAGCAAAGCAAAAATACAGAAGTTGATACAAATTAACAT
CCATAATCTGTGTTGATCCTGGCTAGCTAGAGTGACCATCTTTGTGTTCG
GGCCTGATCAGCAAATCTTCCTGAAATAGCTGCTGCAAGTGCTGCTGTAA
AATTAGGATCTTTGGTCAAATTAGAAGCCATTTGTTGGACCAAAATCTGA
TGGATTGCTGGAGCTTCAATTTGTTGAACTGATGATTTTTTGGCATCATC
AAACAAAAATCCAGGTTGAATCATATCAAGAGTTGCAGTAGGGCTTGCTG
ATAGCATCGATGACGCCGCAGAAACATGAATAGGATTTCCAATAGTTGCA
ACATGGCTAGGGCTCAATGATAATTCAGCTTTTGAATCCGTAGGCTGAGG
ATGATTATGCTCTCCTTCATAAGTTGCCACTAAAATTGATGGATCCTCAG
CACTTCTTTGCACCTTCTTCTTTACGGGACAGCTTGGGGCGAAAGAACAC
TTGAAGTAAGCCCTAGGTGATGGGTTGTCTCTTGTAACCTTTTGGCCATA
CTTTCTCCATTGATACCCATCCTTCACAATCAGGGTTGAATTTGAATCAC
TGGCTCTCACATAAAACCTAGAAACTTTTGCCTTGGTGTTGTTATCCTTT
GGCCTTTTGCATGACTCTTCGTCAGTACTAGTGCTGGACTCAGTAGCGTG
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