CX671274

Overview
NameCX671274
Unique NameCX671274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4185 contig Csv1_Contig4185:604..1443. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671274 vs. ExPASy Swiss-Prot
Match: HAT1_NEUCR (Histone acetyltransferase type B catalytic subunit OS=Neurospora crassa GN=hat-1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 61/218 (27.98%), Postives = 99/218 (45.41%), Query Frame = 1
Query:    4 LYSRLIPLVLLLVDGSNPIDVTDP---RWELYILIRKK--MDQQGDIQHRLLGFTAIYRFYHY----------PDST----------------RMRLSQILILPLYQRKGYGSFLTEVL-SNVAVAENVHDFTVEEPLDSFQHVRTCVDIQHLLAFEPIQH-AINSAVSHLKQGKLSKKILAPRFVPPASTVEEVRKVLKINKKQFLQCWEILIYLRL 558
            L +R+  LV   VDG  PID+ DP   RW +Y L  K+  ++Q     +   G++ +YR+Y +          P  T                R R+SQ +I+P +Q+KG GS L  ++       E   + TVE+P ++F  +R   D+  L      Q   I+++V   ++GK      AP  +   +  E  RK  KI  +QF +  E+ +  +L
Sbjct:  150 LLNRIQILVPFFVDGGTPIDMEDPDVDRWTIYFLYNKRPLLNQPDKFSYHFAGYSTLYRYYAFQPPAESESKTPTDTPTFSVDGDFDLDTLPCRTRISQFIIIPPFQQKGLGSRLYSIIYQQYLKHEPTIELTVEDPNEAFDDMRDLADLAFLSKQPEFQALKIDTSVEIPEEGK------APSNIVDQAAWEACRKKFKIVPRQFARVLEMYLMSQL 361          
BLAST of CX671274 vs. ExPASy Swiss-Prot
Match: HAT1_MOUSE (Histone acetyltransferase type B catalytic subunit OS=Mus musculus GN=Hat1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 67/276 (24.28%), Postives = 123/276 (44.57%), Query Frame = 1
Query:    7 YSRLIPLVLLLVDGSNPIDVTDPRWELYILIRKKMDQQGDIQHRLLGFTAIYRFYHYPDSTRMRLSQILILPLYQRKGYGSFLTEVLSNVAVA-ENVHDFTVEEPLDSFQHVRTCVDIQHLLAFEPIQHAINSAVSHLKQGKLSKKILAPRFVPPASTVEEVRKVLKINKKQFLQCWEILIYLRLDPVD-KYMEDYTTIISNRVREDILGKDSGSTDKRIMDVPSSYDPEMSFVMFKSQNVETSGVQMDENQPSQEEQLKQLVDERIKEIKLIAQK 828
            + RL   ++  ++ ++ IDV D RW  Y L+ +K ++ G      +G+  +Y +Y YPD TR R+SQ+LIL  +Q +G+G+ L E +    ++   V D T E+P  S+  +R  V ++        Q   + +   L QG      +            + +++ KINK+   + +EIL  L  D  D +    Y   I  R+      K       +    P     +M+ +    Q+ +             EE+ ++LV++  + I+ +AQ+
Sbjct:  172 HERLQTFLMWFIETASFIDVDDERWH-YFLVFEKYNKDGATLFATVGYMTVYNYYVYPDKTRPRVSQMLILTPFQGQGHGAQLLETVHRYYISFPTVLDITAEDPSRSYLKLRDFVLVKF------CQFLPSFSRERLLQGFSEDMAI------------QAQQMFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKKQRDLAKMKKCLRPEELTNQMNQIEISVQHEQL------------EERFQELVEDYRRVIERLAQE 416          
BLAST of CX671274 vs. ExPASy Swiss-Prot
Match: HAT1_HUMAN (Histone acetyltransferase type B catalytic subunit OS=Homo sapiens GN=HAT1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.543e-12
Identity = 70/281 (24.91%), Postives = 119/281 (42.35%), Query Frame = 1
Query:    7 YSRLIPLVLLLVDGSNPIDVTDPRWELYILIRKKMDQQGDIQHRLLGFTAIYRFYHYPDSTRMRLSQILILPLYQRKGYGSFLTEVLSNVAVA-ENVHDFTVEEPLDSFQHVRTCVDI---QHLLAF--EPIQHAINSAVSHLKQGKLSKKILAPRFVPPASTVEEVRKVLKINKKQFLQCWEILIYLRLDPVD-KYMEDYTTIISNRVREDILGKDSGSTDKRIMDVPSSYDPEMSFVMFKSQNVETSGVQMDENQPSQEEQLKQLVDERIKEIKLIAQK 828
            + RL   ++  ++ ++ IDV D RW  Y L+ +K ++ G      +G+  +Y +Y YPD TR R+SQ+LIL  +Q +G+G+ L E +         V D T E+P  S+  +R  V +   Q L  F  E +    N  ++                        E ++  KINK+   + +EIL  L  D  D +    Y   I  R+      K       R    P     +M+ +    Q+ +             EE  ++LV++  + I+ +AQ+
Sbjct:  175 HERLQTFLMWFIETASFIDVDDERWH-YFLVFEKYNKDGATLFATVGYMTVYNYYVYPDKTRPRVSQMLILTPFQGQGHGAQLLETVHRYYTEFPTVLDITAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQGFNEDMA-----------------------IEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQL------------EESFQELVEDYRRVIERLAQE 419          
BLAST of CX671274 vs. ExPASy Swiss-Prot
Match: HAT1_SCHPO (Histone acetyltransferase type B catalytic subunit OS=Schizosaccharomyces pombe GN=hat1 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.894e-12
Identity = 61/226 (26.99%), Postives = 110/226 (48.67%), Query Frame = 1
Query:   31 LLLVDGSNPIDVTDPRWELYILIRKKMDQQGDIQHRLLGFTAIYRFYHYP----DSTRMRLSQILILPLYQRKGYGSFL-TEVLSNVAVAENVHDFTVEEPLDSFQHVRTCVDIQHLLAF----EPIQHA------INSAVSHLK--QGKLSK--KILAPRFVPPASTVEEVRKVLKINKKQFLQCWEILIYL----RLDPV----DKYMEDYTTIISN--RVRED 621
            L  ++G + ID+ DPRW +Y+L     D      + L G+  +Y++Y +     D  R R+SQ +ILP +Q +G+GS L   ++S       + DFTVE+  ++F  +R   D + LL+     EP  H       INS ++  K  Q + S+  ++     +   S +E     L I ++ F Q  ++L+ L    R++ +    +   ++Y  I+    +++ED
Sbjct:  145 LFFIEGGSFIDLNDPRWMVYLLYETTEDD-----YCLRGYCTVYKYYKWDKLIHDGIRARISQFVILPPFQHQGHGSQLYNAIVSTFLKNPKILDFTVEDASEAFDSLRDHCDYKRLLSMGIFSEPDFHPSLSRQWINSKIAETKLTQRQFSRCCELAFTTKLKKLSLLERKSVRLGIKERIFRQNLDVLLQLDKSERIEKIHNAYENQFDEYKQIVKKLPKLKED 365          
BLAST of CX671274 vs. ExPASy Swiss-Prot
Match: HAT1_CANGA (Histone acetyltransferase type B catalytic subunit OS=Candida glabrata GN=HAT1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.894e-12
Identity = 51/184 (27.72%), Postives = 89/184 (48.37%), Query Frame = 1
Query:   31 LLLVDGSNPIDVTDPRWELYILIRKKMDQQGDIQHRLLGFTAIYRFYHYPDST----------RMRLSQILILPLYQRKGYGSFL-TEVLSNVAVAENVHDFTVEEPLDSFQHVRTCVDIQHLLAFEPIQHAINSAVSHLKQGKLSKKILAPRFVP-PASTVEEVRKVLKINKKQFLQCWEILI 546
            LL ++ ++ ID  DP+WE++I+  KK         + +G+   Y +++YP +           R ++SQ LILP YQ +G+GS L   ++ N     ++ +  VE+P +SF  +R   D++ L                 K G  +K    P+  P P + +E  R   KI K+QF +  E+++
Sbjct:  161 LLFIEAASYIDEDDPKWEIFIVQTKK-------DKKFVGYATAYNYWYYPGANNFDSESKYRYRGKISQFLILPPYQGRGHGSHLYNSIVKNWRNDSSILEIVVEDPNESFDDLRDVNDLEML----------------YKDGFFNK---LPQERPIPNAWIESTRLKYKIEKRQFSRLLEMIL 318          
The following BLAST results are available for this feature:
BLAST of CX671274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
HAT1_NEUCR9.325e-1327.98Histone acetyltransferase type B catalytic subunit... [more]
HAT1_MOUSE9.325e-1324.28Histone acetyltransferase type B catalytic subunit... [more]
HAT1_HUMAN3.543e-1224.91Histone acetyltransferase type B catalytic subunit... [more]
HAT1_SCHPO7.894e-1226.99Histone acetyltransferase type B catalytic subunit... [more]
HAT1_CANGA7.894e-1227.72Histone acetyltransferase type B catalytic subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10A09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10A09-A18-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671274 ID=CX671274; Name=CX671274; organism=Citrus sinensis; type=EST; length=840bp
CACCTCTACAGTCGTTTAATACCTCTTGTTCTTCTTCTTGTTGATGGAAG
CAACCCTATTGATGTTACTGATCCAAGATGGGAGTTATATATCCTGATTC
GGAAGAAAATGGATCAGCAAGGAGATATTCAACATAGACTTCTTGGTTTT
ACAGCAATATATCGCTTCTATCATTACCCTGACAGTACACGCATGCGACT
CAGTCAGATTTTGATATTGCCTCTTTACCAGCGCAAGGGCTATGGCAGTT
TCCTTACAGAGGTGCTCAGCAATGTTGCAGTAGCTGAAAATGTCCACGAC
TTCACAGTTGAAGAGCCATTAGATTCCTTCCAACACGTTCGCACTTGTGT
CGACATACAACACCTGCTTGCTTTTGAGCCAATCCAGCATGCAATTAACT
CAGCTGTTTCGCATCTGAAGCAAGGGAAACTATCAAAAAAAATCCTTGCC
CCTCGATTTGTGCCACCTGCCAGTACTGTAGAGGAAGTCAGGAAAGTGTT
GAAAATCAACAAGAAACAGTTTCTCCAATGTTGGGAGATTTTAATATATC
TTCGCCTTGATCCTGTTGACAAGTACATGGAGGATTATACCACAATCATT
TCAAATCGTGTGAGGGAAGATATCTTAGGAAAAGATTCAGGCAGTACTGA
CAAGCGCATAATGGATGTACCTAGCTCTTATGATCCGGAGATGTCTTTTG
TCATGTTCAAGTCACAGAATGTTGAAACTAGTGGTGTCCAAATGGATGAA
AATCAACCGAGTCAAGAAGAGCAGCTGAAGCAGTTGGTTGATGAAAGGAT
CAAAGAGATCAAGTTAATTGCACAAAAGGTGTCTCCATTA
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