CV712165

Overview
NameCV712165
Unique NameCV712165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6640 contig Csv1_Contig6640:67..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: TDPZ2_MOUSE (TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.001e-19
Identity = 55/161 (34.16%), Postives = 90/161 (55.90%), Query Frame = -3
Query:  336 FAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 818
            F AHK++LA RSPVF+A     ++++   C ++++++  V K ++ FIY    P +           S  MA  +LAAAD+Y LE LK++CE  LC ++++   A TL +A+ H   QLK   L FIA   +   V ++ G++ + ES P ++ E    +A
Sbjct:  199 FRAHKVILAARSPVFRAMFEHQMEERLANCFEIQELDFQVFKEMMDFIYTGKAPTLH----------SHSMACDVLAAADKYGLEGLKVICEDSLCRNLSVENAAHTLIVADLHSTEQLKTRALHFIA--VHASEVSKSSGWKSMVESHPHLVDERFHSLA 347          
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: RDX_DROME (Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.001e-19
Identity = 57/161 (35.40%), Postives = 90/161 (55.90%), Query Frame = -3
Query:  336 FAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 818
            F AHK +LA RS VF A     ++++    + + D++  V K +L FIY    P++E             MA  LLAAAD+YALE+LK++CE  LC ++++ T A TL LA+ H   QLKA  + FI +  +   VM+T G++ +  +   ++ E  + +A
Sbjct:  666 FQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNLEK------------MADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFINT--HATDVMETSGWQNMITTHSHLIAEAFRALA 812          
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOP_XENTR (Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19
Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = -3
Query:  336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 824
            + F AHK +LA RSPVF A     +++     ++++D+E  V K ++ FIY     +++             MA  LLAAAD+YALERLK++CE  LC ++++   A  L LA+ H   QLK   + FI    +   VM+T G++ +  S P ++ E  + +A
Sbjct:  209 QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDK------------MADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVMETSGWKSMVVSHPHLVAEAYRSLA 357          
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOPB_XENLA (Speckle-type POZ protein B OS=Xenopus laevis GN=spop-B PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19
Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = -3
Query:  336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 824
            + F AHK +LA RSPVF A     +++     ++++D+E  V K ++ FIY     +++             MA  LLAAAD+YALERLK++CE  LC ++++   A  L LA+ H   QLK   + FI    +   VM+T G++ +  S P ++ E  + +A
Sbjct:  209 QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDK------------MADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVMETSGWKSMVVSHPHLVAEAYRSLA 357          
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOPA_XENLA (Speckle-type POZ protein A OS=Xenopus laevis GN=spop-A PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19
Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = -3
Query:  336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 824
            + F AHK +LA RSPVF A     +++     ++++D+E  V K ++ FIY     +++             MA  LLAAAD+YALERLK++CE  LC ++++   A  L LA+ H   QLK   + FI    +   VM+T G++ +  S P ++ E  + +A
Sbjct:  209 QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDK------------MADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVMETSGWKSMVVSHPHLVAEAYRSLA 357          
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: TDPZ4_MOUSE (TD and POZ domain-containing protein 4 OS=Mus musculus GN=Tdpoz4 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.231e-19
Identity = 56/161 (34.78%), Postives = 87/161 (54.04%), Query Frame = -3
Query:  336 FAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 818
            F AHK +LA RSPVF+A     ++++ T C+++ D++  V K ++ FIY   +P +           S  MA  LLAAADRY L+ LK++CE  LC ++++   A TL +A+ H    +K   L FI        V +T G+  + ES P ++ E    +A
Sbjct:  199 FRAHKAILAARSPVFRAMFEHQMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLH----------SHSMACDLLAAADRYGLKDLKVMCEDALCRNLSVENAAHTLIVADLHSTEHVKTQALDFII--VYASEVSKTSGWMSMVESHPRLVAEAFHSLA 347          
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: BAT43_CAEEL (BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans GN=bath-43 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.221e-18
Identity = 57/163 (34.97%), Postives = 87/163 (53.37%), Query Frame = -3
Query:  336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 824
            + F  HK +LA RS VF A     +++ +T    V+D+E  V + LL ++Y      +E             MAQ L+AAAD+Y L+RLK++CE  LC  +  +  + TL LA+ +  SQL+A  + FI    N   VM T+G+E L    P +L E+ + +A
Sbjct:  280 QTFHIHKAILAARSRVFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQTKYIEQ------------MAQSLIAAADKYQLDRLKVMCEQALCYQLTTDNASLTLMLADMYSASQLRAHSINFI--NVNANEVMDTEGWEDLVRDHPKLLEEVFRALA 428          
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: TDPZ5_MOUSE (TD and POZ domain-containing protein 5 OS=Mus musculus GN=Tdpoz5 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.652e-17
Identity = 53/153 (34.64%), Postives = 83/153 (54.25%), Query Frame = -3
Query:  360 FAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVL 818
            F AHK +LA RSPVF+A     ++++     ++ D++  V K ++ FIY    P ++          S  MA  +L AAD+Y LE LK+LCE  LC ++++   A TL LA+ H   QLK   L FIA   +   V +T  ++ + E+ P ++
Sbjct:  199 FRAHKAILAARSPVFRAMFEHEMEERLGNPTEIHDLDPKVFKEMMGFIYTGKAPHLQ----------SHSMATDVLTAADKYGLEGLKVLCEDALCRNLSVENAAQTLILADLHKREQLKTQALYFIAL--HASVVSETSEWKSMMETHPHLV 339          
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: TDPZ1_MOUSE (TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.935e-17
Identity = 56/161 (34.78%), Postives = 82/161 (50.93%), Query Frame = -3
Query:  336 FAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 818
            F AHK +LA RSPVF+A     +K+     IK+ ++   V K ++ FIY    P +           S  MA  +L AAD+Y L  LK+LCE  LC ++++     TL LA+ H   +LK   L FIA       V +T  ++ + ES P ++ E  Q +A
Sbjct:  199 FRAHKAILAARSPVFRAMFEHEMKESLKTPIKIHNLNPQVFKEMMGFIYTGKAPHLH----------SHSMACDVLPAADKYGLVSLKVLCEDALCRNLSVKNATHTLILADLHSTEKLKTQALDFIA--YYASEVCETSEWKSMVESHPHLVAEAFQSLA 347          
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: TDPZ3_MOUSE (TD and POZ domain-containing protein 3 OS=Mus musculus GN=Tdpoz3 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.938e-16
Identity = 55/161 (34.16%), Postives = 86/161 (53.42%), Query Frame = -3
Query:  336 FAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 818
            F AHK +LA RSPVF+A     +K+     I++ D+++ V K ++ FIY    P +           S  MA  +L AAD+Y L  LK+LCE  LC ++++   A TL LAE +   +LK+  L FIA   +   V +T  ++ + +S P ++ E    +A
Sbjct:  199 FKAHKAILAARSPVFRAMFEHEMKESLKNPIEIMDLDLDVFKEMMGFIYTGKAPHLH----------SHSMACDVLPAADKYGLVGLKVLCEDVLCRNLSVKNAAHTLILAELNSTEKLKSQALDFIAI--HACEVSETSEWKSMWKSHPHLVAEAFHSLA 347          
The following BLAST results are available for this feature:
BLAST of CV712165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
TDPZ2_MOUSE1.001e-1934.16TD and POZ domain-containing protein 2 OS=Mus musc... [more]
RDX_DROME1.001e-1935.40Protein roadkill OS=Drosophila melanogaster GN=rdx... [more]
SPOP_XENTR1.708e-1934.36Speckle-type POZ protein OS=Xenopus tropicalis GN=... [more]
SPOPB_XENLA1.708e-1934.36Speckle-type POZ protein B OS=Xenopus laevis GN=sp... [more]
SPOPA_XENLA1.708e-1934.36Speckle-type POZ protein A OS=Xenopus laevis GN=sp... [more]
TDPZ4_MOUSE2.231e-1934.78TD and POZ domain-containing protein 4 OS=Mus musc... [more]
BAT43_CAEEL3.221e-1834.97BTB and MATH domain-containing protein 43 OS=Caeno... [more]
TDPZ5_MOUSE4.652e-1734.64TD and POZ domain-containing protein 5 OS=Mus musc... [more]
TDPZ1_MOUSE7.935e-1734.78TD and POZ domain-containing protein 1 OS=Mus musc... [more]
TDPZ3_MOUSE3.938e-1634.16TD and POZ domain-containing protein 3 OS=Mus musc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A06_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712165 ID=CV712165; Name=CV712165; organism=Citrus sinensis; type=EST; length=826bp
AGTCACTTGCAGGTGCAGCTTAAAATCGATTCACCAGTCTTTTAACTTCC
AGGAACTGCACAGGAAACAAACTTTCAACACCCAGATGTTCAAAAATTGT
AGAAAATATTAATGAACCACTAATGTTATATTTAACAAATAATTTATCAA
CTGTTAGTATAATCCAAAAATGTTTGGACCTAACTTTTTTTTTCCGGGGT
GGTAAAGATAATGGAAGATCAGTCATTCCTTTATCAATGTACCCTCTGCT
TCACCCGCCTCCCATTGACATCACAGCCATCTGGTAATGTCTCGTTCCCA
TGCCCTGAAGCAATGACAGAATGCTCGCCTATTTTGGCCACATATTGTAG
CAGTTCGGTGAGGACAGAAGGGCAACTTTCTTTTAAGTATTCAAACCCAT
CTGTTTGCATCACAGCTTTTAAATTTTCAGGTGATGCAATGAATTTGAGA
CAAACAGCTTTCAGTTGGGAACAGTGATGCTGCTCTGCCAAGGCCAACGT
GGTGGCAACAGTGTTTATAGCAACATCTTCACAGAGCTTAGCCTCACAGA
GTAATTTGAGCCTCTCAAGTGCATACCGGTCTGCTGCAGCAAGAAGATGC
TGAGCCATCAGTGTAGAAGCCCATTTTGGACTCAGATCAACAAGGTCTTC
CATATCTGGCAGAGCATCCCAGTAGATAAAATGCAATAATGCCTTANAAA
CTGGGACTTCCATGTCTTCCACCTTAATGCATTGAGTGTTTTGATCCTTT
AATGGACCAAAAAGTTGTGCCTTGAACACAGGTGAACGTGTAGCAAGTAC
CAACTTGTGGGCAGCAAACCTTTCTC
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