GO241389

Overview
NameGO241389
Unique NameGO241389
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5655 contig Csv1_Contig5655:306..917. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.407e-18
Identity = 53/131 (40.46%), Postives = 79/131 (60.31%), Query Frame = 2
Query:    2 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS--REVTESINLNKETEGSCSIEV 388
            E+D ++ G     +KR+L  EQV  LE +F   +KLE  RK ++A  LGL PRQVA+WFQNRRARWK K+LE++Y  LK  ++ V   +  L++Q  KL  ++   +S  R+++E +        S S+ V
Sbjct:   60 EEDVAEIGGML--RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSSSLSV 188          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.964e-17
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 2
Query:    5 DDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 304
            DD  D+   +  KK RL  +Q   LE NF+L + L P++K  LAR L L+PRQV +WFQNRRAR K KQ E D + LK+  E +  +   LQ + Q L A
Sbjct:  114 DDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKA 213          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.952e-16
Identity = 49/106 (46.23%), Postives = 63/106 (59.43%), Query Frame = 2
Query:   14 SDDGSQAG--EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS 325
            SDD    G   KK RL+ +Q   LE  F+  N L P++K  LAR L L+PRQV +WFQNRRAR K KQ E D +LLKR         E L  +N++LH E+  L++
Sbjct:  146 SDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCC-------ETLTDENRRLHRELQELRA 244          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.952e-16
Identity = 49/106 (46.23%), Postives = 63/106 (59.43%), Query Frame = 2
Query:   14 SDDGSQAG--EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS 325
            SDD    G   KK RL+ +Q   LE  F+  N L P++K  LAR L L+PRQV +WFQNRRAR K KQ E D +LLKR         E L  +N++LH E+  L++
Sbjct:  146 SDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCC-------ETLTDENRRLHRELQELRA 244          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.162e-16
Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 2
Query:    2 EDDFS-DDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREV 334
            +++FS DDGS    KK RL  EQ + LE +F   + L P++K  LA+ L L+PRQ+ +WFQNRRAR K KQ E + + LKR +        +L  +N +LH E+  L++ +V
Sbjct:  125 DEEFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWF-------GSLTEENHRLHREVEELRAMKV 229          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.150e-15
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 2
Query:    2 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS 325
            +DD   DG+  G KK RL+ +Q   LE+ F+  + L P++K+ LA  LGL+PRQV +WFQNRRAR K KQ E D + LKR  E +  + + L    +K  A++ ALK+
Sbjct:  103 DDDDGADGA-GGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRL----EKELADLRALKA 205          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSI (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica GN=HOX2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.150e-15
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 2
Query:    2 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS 325
            +DD   DG+  G KK RL+ +Q   LE+ F+  + L P++K+ LA  LGL+PRQV +WFQNRRAR K KQ E D + LKR  E +  + + L    +K  A++ ALK+
Sbjct:  103 DDDDGADGA-GGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRL----EKELADLRALKA 205          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSJ (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica GN=HOX12 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.150e-15
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 2
Query:   17 DDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 328
            + G     KKRRL+ EQ + LE +F+   KLE  RK+QLA  LGL  +QVA+WFQNRRAR K+K +E+++  L+  ++AV         QN  L  E++ LK R
Sbjct:   53 ESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAV-------VLQNCHLETELLKLKER 149          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSI (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica GN=HOX12 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.150e-15
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 2
Query:   17 DDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 328
            + G     KKRRL+ EQ + LE +F+   KLE  RK+QLA  LGL  +QVA+WFQNRRAR K+K +E+++  L+  ++AV         QN  L  E++ LK R
Sbjct:   53 ESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAV-------VLQNCHLETELLKLKER 149          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.502e-15
Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 2
Query:    8 DFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 304
            D  DDGS    KK RL  EQ   LE  F   + L P++K+ LA+ L L+PRQV +WFQNRRAR K KQ E D + LKR  E +  +   LQ + Q+L A
Sbjct:  118 DDDDDGST--RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRA 214          
The following BLAST results are available for this feature:
BLAST of GO241389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
ATB53_ARATH9.407e-1840.46Homeobox-leucine zipper protein ATHB-53 OS=Arabido... [more]
HAT22_ARATH7.964e-1746.00Homeobox-leucine zipper protein HAT22 OS=Arabidops... [more]
HOX1_ORYSJ3.952e-1646.23Homeobox-leucine zipper protein HOX1 OS=Oryza sati... [more]
HOX1_ORYSI3.952e-1646.23Homeobox-leucine zipper protein HOX1 OS=Oryza sati... [more]
ATB17_ARATH5.162e-1641.96Homeobox-leucine zipper protein ATHB-17 OS=Arabido... [more]
HOX2_ORYSJ1.150e-1544.44Homeobox-leucine zipper protein HOX2 OS=Oryza sati... [more]
HOX2_ORYSI1.150e-1544.44Homeobox-leucine zipper protein HOX2 OS=Oryza sati... [more]
HOX12_ORYSJ1.150e-1544.23Homeobox-leucine zipper protein HOX12 OS=Oryza sat... [more]
HOX12_ORYSI1.150e-1544.23Homeobox-leucine zipper protein HOX12 OS=Oryza sat... [more]
HOX19_ORYSJ1.502e-1547.47Homeobox-leucine zipper protein HOX19 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank description37 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 119 5, mRNA sequence.