GO241389

Overview
NameGO241389
Unique NameGO241389
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5655 contig Csv1_Contig5655:306..917. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSI (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica GN=HOX18 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.699e-14
Identity = 49/111 (44.14%), Postives = 64/111 (57.66%), Query Frame = 2
Query:    5 DDFSDDGSQAG-----EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 322
            DD  D GS +G      KK +L  EQ   LE +F + N L   +K +LAR L L+PRQV +WFQNRRAR K KQ E D + LKR         E+L  +N++L  E+M L+
Sbjct:   98 DDGGDGGSGSGGGGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCC-------ESLTEENKQLKHELMELR 201          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSJ (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. japonica GN=HOX18 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.831e-14
Identity = 49/111 (44.14%), Postives = 63/111 (56.76%), Query Frame = 2
Query:    5 DDFSDDGSQAG-----EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 322
            DD  D GS  G      KK +L  EQ   LE +F + N L   +K +LAR L L+PRQV +WFQNRRAR K KQ E D + LKR         E+L  +N++L  E+M L+
Sbjct:   98 DDGGDGGSGGGGGGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCC-------ESLTEENKQLKHELMELR 201          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.310e-14
Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 2
Query:   41 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 304
            KK RL+ EQ + LE++F L + L P++K  LA  L L+PRQV +WFQNRRAR K KQ E + + LKR + ++  +   LQ + ++L A
Sbjct:   78 KKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRA 165          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.310e-14
Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 2
Query:   41 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 304
            KK RL+ EQ + LE++F L + L P++K  LA  L L+PRQV +WFQNRRAR K KQ E + + LKR + ++  +   LQ + ++L A
Sbjct:   78 KKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRA 165          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.076e-13
Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 2
Query:    2 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 304
            ED  + DGS+   KK RL+ +Q   LE+ F+  + L P++K+ LA+ L L+ RQV +WFQNRRAR K KQ E D + LKR  + +  +   LQ +  +L A
Sbjct:  153 EDGGNGDGSR---KKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRA 250          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX26_ORYSJ (Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa subsp. japonica GN=HOX26 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.398e-13
Identity = 46/104 (44.23%), Postives = 54/104 (51.92%), Query Frame = 2
Query:    5 DDFSDDGSQ------------AGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQ 280
            DD  DDG +            A  KK RL  EQ   LE +F   N L    K +LA  LGL  RQV +WFQNRRAR K KQ E D DLL+R  + + AD   L+
Sbjct:   93 DDDDDDGDRRSPSGGGGDEEGASRKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDLLRRWCDHLAADNARLR 196          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.132e-13
Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = 2
Query:   17 DDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 304
            D+      KK RL+ +Q   LE+ F+  + L P++K  LA+ LGL+ RQV +WFQNRRAR K KQ E D + L+R  E +  +   LQ +  +L A
Sbjct:  121 DEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRA 216          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.554e-12
Identity = 42/101 (41.58%), Postives = 58/101 (57.43%), Query Frame = 2
Query:    2 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 304
            EDD +  G +   KK RL  EQ   LE++F   + L P++K  LA  L L  RQV +WFQNRRAR K K  E + + LKR + ++K     LQ + ++L A
Sbjct:   58 EDDSNSGGRR--RKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRA 156          
The following BLAST results are available for this feature:
BLAST of GO241389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
HOX18_ORYSI3.699e-1444.14Homeobox-leucine zipper protein HOX18 OS=Oryza sat... [more]
HOX18_ORYSJ4.831e-1444.14Homeobox-leucine zipper protein HOX18 OS=Oryza sat... [more]
HOX3_ORYSJ6.310e-1445.45Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
HOX3_ORYSI6.310e-1445.45Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
ATHB4_ARATH1.076e-1342.57Homeobox-leucine zipper protein ATHB-4 OS=Arabidop... [more]
HOX26_ORYSJ2.398e-1344.23Putative homeobox-leucine zipper protein HOX26 OS=... [more]
HAT4_ARATH3.132e-1341.67Homeobox-leucine zipper protein HAT4 OS=Arabidopsi... [more]
ATHBX_ARATH1.554e-1241.58Homeobox-leucine zipper protein ATHB-X OS=Arabidop... [more]

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Properties
Property NameValue
Genbank description37 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 119 5, mRNA sequence.