DT214601

Overview
NameDT214601
Unique NameDT214601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6531 contig Csv1_Contig6531:1..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_RICPR (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia prowazekii GN=pdhC PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.541e-37
Identity = 77/154 (50.00%), Postives = 113/154 (73.38%), Query Frame = -2
Query:  400 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 861
            N+SW+++ IR + NV+I+VAV  ENG+  P+++DA+KK +  ++ E++ L +KAKDN L P +++GG FT++NL G +GIK F AIIN PQS I+ VG++ KR +  +  DQ   ++ M VTLS DHRVIDGA+ AE+L +FK +IENP  ML+
Sbjct:  258 NASWSEDAIRYYNNVDISVAVAIENGIVTPIVKDANKKNIIELSREMKTLIKKAKDNKLTPIEFQGGGFTISNL-GMYGIKNFNAIINTPQSCIMGVGASTKRAI--VKNDQIIIATIMDVTLSADHRVIDGAVSAEFLASFKRFIENPVLMLI 408          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_RICTY (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia typhi GN=pdhC PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.334e-37
Identity = 78/154 (50.65%), Postives = 113/154 (73.38%), Query Frame = -2
Query:  400 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 861
            N+SWA++ IR + NV+I+VAV  ENG+  P+I+DA+KK +  ++ E++ L +KAKDN L P +++GG FT++NL G +GIK F AIIN PQS I+ VG++ KR +  +  DQ   ++ M VTLS DHRVIDGA+ AE+L +FK +IE+P  ML+
Sbjct:  254 NASWAEDAIRYYNNVDISVAVAIENGIVTPIIKDANKKNIIELSHEMKILIKKAKDNKLTPVEFQGGGFTISNL-GMYGIKNFNAIINTPQSCIMGVGASTKRAI--VKNDQIIIATIMDVTLSADHRVIDGAVSAEFLASFKRFIEHPVLMLI 404          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_NEUCR (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Neurospora crassa GN=mrp-3 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 6.258e-36
Identity = 73/157 (46.50%), Postives = 108/157 (68.79%), Query Frame = -2
Query:  400 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPD---QYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 861
            NSSW D  IRQF+ V+++VAV T NGL  P+++  + KGL +I+  V++LA+KA+D  LKP++Y+GG+ +++N+G    ++ F AIINPPQ+ ILAVG+ +K  VP    D      +   + VT S DH+V+DGA+GAEW++  K  IENP  +LL
Sbjct:  302 NSSWRDGVIRQFETVDVSVAVATPNGLITPIVKGVEGKGLESISAAVKELAKKARDGKLKPEEYQGGSISISNMGMNPAVQSFTAIINPPQAAILAVGAPQKVAVPVENEDGTTGVSWDEQIIVTASFDHKVVDGAVGAEWIRELKKVIENPLELLL 458          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_RHIME (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rhizobium meliloti GN=pdhC PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.434e-34
Identity = 72/154 (46.75%), Postives = 105/154 (68.18%), Query Frame = -2
Query:  400 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 861
            N SW D+ + + K+ ++ VAV    GL  P++R A+ K LS I+ E++ L ++AK+  LKP++Y+GGT  V+N+ G  G+K F A++NPP + ILAVG+ E RVV  +   +   ++ M+VTLS DHR +DGA+GAE L AFK YIENP  ML+
Sbjct:  297 NVSWTDQNMVKHKHADVGVAVSIPGGLITPIVRQAELKSLSAISNEMKDLGKRAKERKLKPEEYQGGTTAVSNM-GMMGVKDFAAVVNPPHATILAVGAGEDRVV--VRNKEMVIANVMTVTLSTDHRCVDGALGAELLAAFKRYIENPMGMLV 447          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_SCHPO (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Schizosaccharomyces pombe GN=SPCC794.07 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.650e-34
Identity = 73/155 (47.10%), Postives = 107/155 (69.03%), Query Frame = -2
Query:  400 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQ-YKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 861
            N++W  ++IRQ+KNV+I++AV T +GL  PVIR+    GL+ I+   +   Q+A++N LKP++Y+GGTFT++NL G F + QF AIINPPQ+ ILAVG+    VVP    ++ +K +  M  TLS DHRV+DGA+ A +  A K  +ENP  ++L
Sbjct:  330 NAAWMGDFIRQYKNVDISMAVATPSGLITPVIRNTHALGLAEISTLAKDYGQRARNNKLKPEEYQGGTFTISNL-GMFPVDQFTAIINPPQACILAVGTTVDTVVPDSTSEKGFKVAPIMKCTLSSDHRVVDGAMAARFTTALKKILENPLEIML 483          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: OPD21_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=LTA3 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.764e-30
Identity = 67/144 (46.53%), Postives = 99/144 (68.75%), Query Frame = -2
Query:  400 NVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSF---MSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 822
            +V+I++AV TE GL  P+I++AD+K +S I+ EV++LAQKA+   L P +++GGTF+++NL G + +  FCAIINPPQ+GILAVG   K V P +G D  +  S    M+VTLS DHR+ DG +GA ++   +   E+   +LL
Sbjct:  495 SVDISIAVATEKGLMTPIIKNADQKSISAISLEVKELAQKARSGKLAPHEFQGGTFSISNL-GMYPVDNFCAIINPPQAGILAVGRGNKVVEPVIGLDGIEKPSVVTKMNVTLSADHRIFDGQVGASFMSELRSNFEDVRRLLL 637          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_YEAST (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Saccharomyces cerevisiae GN=PDA2 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.764e-30
Identity = 65/157 (41.40%), Postives = 104/157 (66.24%), Query Frame = -2
Query:  400 NSSWA--DEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQ-YKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 861
            N+ W   +  IR+FKNV+++VAV T  GL  P++++ + KGLS I+ E+++L ++A+ N L P++++GGT  ++N+G    +  F +IINPPQS ILA+ + E+  V     +  + F + +++T + DHR IDGA GAE++K  K  IENP  MLL
Sbjct:  326 NAYWLPNENVIRKFKNVDVSVAVATPTGLLTPIVKNCEAKGLSQISNEIKELVKRARINKLAPEEFQGGTICISNMGMNNAVNMFTSIINPPQSTILAIATVERVAVEDAAAENGFSFDNQVTITGTFDHRTIDGAKGAEFMKELKTVIENPLEMLL 482          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_ZYMMO (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Zymomonas mobilis GN=pdhC PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 8.753e-30
Identity = 66/153 (43.14%), Postives = 103/153 (67.32%), Query Frame = -2
Query:  403 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESML 861
            N ++  + + QF   +I+VAV  E GL  P+++ AD K LS ++ E+++L  +A++  L+PQ+Y+GGT +++N+ G FGIKQF A+INPPQ+ ILA+GS E+R  P +  D    ++  ++T S DHRVIDGA  A ++ AFK  +E P  +L
Sbjct:  289 NVAFDGDQMLQFSQADISVAVSVEGGLITPILKQADTKSLSALSVEMKELIARAREGRLQPQEYQGGTSSISNM-GMFGIKQFNAVINPPQASILAIGSGERR--PWVIDDAITIATVATITGSFDHRVIDGADAAAFMSAFKHLVEKPLGIL 438          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODPX_BOVIN (Pyruvate dehydrogenase protein X component OS=Bos taurus GN=PDHX PE=1 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 5.674e-29
Identity = 67/152 (44.08%), Postives = 100/152 (65.79%), Query Frame = -2
Query:  415 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAE---KRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENP 861
            N+SW  E  +Q  +++I+VAV T+ GL  PVI+DA  KGL  IA+ V+ L++KA+D  L P++Y+GG+F+++NL G FGI +F A+INPPQ+ ILAVG      K      G  Q +    ++VT+S D RV+D  +   +L++FK  +ENP
Sbjct:  347 NASWDGEGAKQLPSIDISVAVATDRGLITPVIKDAAAKGLQEIADSVKALSKKARDGKLLPEEYQGGSFSISNL-GMFGIDEFTAVINPPQACILAVGRFRPVLKLTQDEEGNAQLQQRQLITVTMSSDSRVVDDELATRFLESFKANLENP 497          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODPX_MOUSE (Pyruvate dehydrogenase protein X component, mitochondrial OS=Mus musculus GN=Pdhx PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.273e-28
Identity = 65/152 (42.76%), Postives = 98/152 (64.47%), Query Frame = -2
Query:  415 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAE---KRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENP 861
            N +W  E  +Q  +V+I+VAV T+ GL  P+I+DA  KG+  IA+ V+ L++KA+D  L P++Y+GG+F+++NL G FGI +F A+INPPQ+ ILAVG      K      G  Q +    ++VT+S D RV+D  +   +L+ FK  +ENP
Sbjct:  347 NVTWDGEGPKQLPSVDISVAVATDKGLITPIIKDAAAKGIQEIADSVKVLSKKARDGKLMPEEYQGGSFSISNL-GMFGIDEFAAVINPPQACILAVGRFRPVLKLTEDEEGNPQLQQHQLITVTMSSDSRVVDDELATRFLETFKANLENP 497          
The following BLAST results are available for this feature:
BLAST of DT214601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
ODP2_RICPR2.541e-3750.00Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICTY4.334e-3750.65Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_NEUCR6.258e-3646.50Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RHIME3.434e-3446.75Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_SCHPO7.650e-3447.10Dihydrolipoyllysine-residue acetyltransferase comp... [more]
OPD21_ARATH1.764e-3046.53Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_YEAST1.764e-3041.40Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_ZYMMO8.753e-3043.14Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODPX_BOVIN5.674e-2944.08Pyruvate dehydrogenase protein X component OS=Bos ... [more]
ODPX_MOUSE6.273e-2842.76Pyruvate dehydrogenase protein X component, mitoch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N13_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0006c_G07_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214601 ID=DT214601; Name=DT214601; organism=Citrus sinensis; type=EST; length=862bp
GTTGTTTCACACAACACTGGTAATTGGAAAATCCAAAAAATATATATAAA
TCAAATTATTACCCGCATGAAAGAGGCGATTACACTCTACTAAAATCATG
TTCATCACGTATGTAACCCAAAAATCCATTAAGGAAAGGTCGATAGCAGA
ACACCTTGTTGAACACCCTATCAAGGATGAGTATGAGTTTAAGGATTGGT
TTCATGCCTCGATCCCCTGCTTTTATTCCAAAAATTTTGCATAAAAGTGT
TTACCAATTGAAAAACAAAATCAAGATGTGCTCAGTGACACAACCATGCC
AATCTGATCCCAGGTGGAAGGGGTTGAACTGAAGCCCCCATCTAAACTGA
TACAGCTAGGAAAGAGCTTCTCAACTTAGAAAAAGAAGAGTTTGGCTTAT
AGCAACATGGACTCCGGATTCTCAATGTATCCTTTGAATGCTTTCAACCA
TTCAGCACCAATCGCACCATCTATTACGCGATGATCACAACTTAATGTTA
CCGACATGAAGGAAGAAAATTTGTACTGATCTGGACCCAAGCCAGGGACA
ACCCTTTTCTCAGCAGATCCAACTGCAAGAATGCCAGATTGAGGAGGATT
GATAATGGCACAGAATTGCTTGATGCCGAAGGGTCCTCCCAAATTGGTAA
CTGTGAATGTGCCTCCCTCATAATCTTGTGGTTTCAAGCTGTTGTCTTTG
GCTTTCTGGGCCAACTGTCTGACCTCTTCAGCAATTGTGGATAAGCCTTT
CTTGTCAGCATCCCTTATAACTGGGACATAAAGACCGTTTTCTGTCTGCA
CTGCTACATTAATATTCACATTCTTAAATTGTCGGATATATTCATCAGCC
CATGAACTATTG
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