DT214601

Overview
NameDT214601
Unique NameDT214601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6531 contig Csv1_Contig6531:1..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_TAKRU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial (Fragment) OS=Takifugu rubripes GN=dlst PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.072e-19
Identity = 56/140 (40.00%), Postives = 82/140 (58.57%), Query Frame = -2
Query:  400 VNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 819
            V+I+VAV T  GL VPVIR+ +    + I   +  L +KA++N L  +D +GGTFT++N GG FG      IINPPQS IL +    +R V   G  + +    M V L+ DHR++DG     +L+  K  +E+P ++LL
Sbjct:  271 VDISVAVATPKGLVVPVIRNVETMNFADIERTINALGEKARNNELAVEDMDGGTFTISN-GGVFGSLFGTPIINPPQSAILGMHGIFQRPVAVDGKAEIR--PMMYVALTYDHRLVDGREAVTFLRKIKAAVEDPRALLL 407          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_STAHJ (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus haemolyticus (strain JCSC1435) GN=odhB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.401e-19
Identity = 57/139 (41.01%), Postives = 77/139 (55.40%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            +I VAV T++GL VP +RD DKK  + +   +  LA KA+D  L   D   G+FT+TN GG FG      IIN  Q+ IL + S   R +  +  D  +    M + LS DHR+IDG     +LK  K  IE+PE +LL
Sbjct:  285 DIGVAVSTDDGLLVPFVRDCDKKNFAELERAIADLAVKARDKKLGLDDMVNGSFTITN-GGVFGSMMSTPIINGNQAAILGMHSIITRPI-AIDKDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIESPEDLLL 421          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_PIG (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Sus scrofa GN=DLST PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.075e-19
Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = -2
Query:  400 VNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 819
            ++I+VAV T  GL VPVIR+ +    + I   + +L +KA+ N L  +D +GGTFT++N GG FG      IINPPQS IL + +   R V   G  + +    M V L+ DHR+IDG     +L+  K  +E+P  +LL
Sbjct:  317 IDISVAVATPRGLVVPVIRNVETMNYADIERTISELGEKARKNELAIEDMDGGTFTISN-GGVFGSLFGTPIINPPQSAILGMHAIVDRPVAVGG--KVEIRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLL 453          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_MOUSE (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dlst PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.323e-19
Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = -2
Query:  400 VNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 819
            ++I+VAV T  GL VPVIR+ +    + I   + +L +KA+ N L  +D +GGTFT++N GG FG      IINPPQS IL + +   R V   G  + +    M V L+ DHR+IDG     +L+  K  +E+P  +LL
Sbjct:  316 IDISVAVATPRGLVVPVIRNVETMNYADIERTINELGEKARKNELAIEDMDGGTFTISN-GGVFGSLFGTPIINPPQSAILGMHAIFDRPVAVGG--KVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLL 452          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_STAES (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhC PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.951e-19
Identity = 49/139 (35.25%), Postives = 83/139 (59.71%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A  T+ GL VPV++ AD+K +  I++E+ +LA KA+D  L  ++ +G T T++N+G   G + F  +IN P+  IL +G   ++  P +   +   +  ++++LS DHR IDGA G   +   K  + NPE +L+
Sbjct:  296 NIGIAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIGSAGG-QWFTPVINHPEVAILGIGRIAQK--PIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLM 431          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_STAEQ (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhC PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.951e-19
Identity = 49/139 (35.25%), Postives = 83/139 (59.71%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A  T+ GL VPV++ AD+K +  I++E+ +LA KA+D  L  ++ +G T T++N+G   G + F  +IN P+  IL +G   ++  P +   +   +  ++++LS DHR IDGA G   +   K  + NPE +L+
Sbjct:  296 NIGIAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIGSAGG-QWFTPVINHPEVAILGIGRIAQK--PIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLM 431          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_RAT (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus GN=Dlst PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.951e-19
Identity = 56/141 (39.72%), Postives = 82/141 (58.16%), Query Frame = -2
Query:  400 VNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAV-GSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 819
            ++I+VAV T  GL VPVIR+ +    + I   + +L +KA+ N L  +D +GGTFT++N GG FG      IINPPQS IL + G  ++ V  G    + +    M V L+ DHR+IDG     +L+  K  +E+P  +LL
Sbjct:  316 IDISVAVATPRGLVVPVIRNVETMNYADIERTINELGEKARKNELAIEDMDGGTFTISN-GGVFGSLFGTPIINPPQSAILGMHGIFDRPVAVG---GKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLL 452          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_RALEH (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=pdhB PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.079e-19
Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = -2
Query:  400 KNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 825
            K  NI  A  T NGL VPVI+DADKKG+  I++E+ +LA+ A+D  LKP   +GG F++++LGG  G   F  IIN P+  I+ V  + ++  P     Q+     + ++LS DHRVIDGA  A +   F   + +   +LL
Sbjct:  415 KYFNIGFAADTPNGLVVPVIKDADKKGVLEISQEMSELAKLARDGKLKPDQMQGGCFSISSLGG-LGGTYFTPIINAPEVAIMGVCKSYQK--PVWDGKQFAPRLTLPLSLSWDHRVIDGAEAARFNTYFGQLLADFRRILL 553          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_HUMAN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DLST PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 9.079e-19
Identity = 56/141 (39.72%), Postives = 82/141 (58.16%), Query Frame = -2
Query:  400 VNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAV-GSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 819
            ++I+VAV T  GL VPVIR+ +    + I   + +L +KA+ N L  +D +GGTFT++N GG FG      IINPPQS IL + G  ++ V  G    + +    M V L+ DHR+IDG     +L+  K  +E+P  +LL
Sbjct:  315 IDISVAVATPRGLVVPVIRNVEAMNFADIERTITELGEKARKNELAIEDMDGGTFTISN-GGVFGSLFGTPIINPPQSAILGMHGIFDRPVAIG---GKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLL 451          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_BOVIN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Bos taurus GN=DLST PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.079e-19
Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = -2
Query:  400 VNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 819
            ++I+VAV T  GL VPVIR+ +    + I   + +L +KA+ N L  +D +GGTFT++N GG FG      IINPPQS IL + +   R  P +   + +    M V L+ DHR+IDG     +L+  K  +E+P  +LL
Sbjct:  317 IDISVAVATPRGLVVPVIRNVETMNYADIERTISELGEKARKNELAIEDMDGGTFTISN-GGVFGSLFGTPIINPPQSAILGMHAIVDR--PVVIGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLL 453          
The following BLAST results are available for this feature:
BLAST of DT214601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
ODO2_TAKRU1.072e-1940.00Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAHJ1.401e-1941.01Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_PIG4.075e-1940.00Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_MOUSE5.323e-1940.00Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODP2_STAES6.951e-1935.25Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAEQ6.951e-1935.25Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_RAT6.951e-1939.72Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODP2_RALEH9.079e-1940.14Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_HUMAN9.079e-1939.72Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_BOVIN9.079e-1939.29Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N13_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0006c_G07_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214601 ID=DT214601; Name=DT214601; organism=Citrus sinensis; type=EST; length=862bp
GTTGTTTCACACAACACTGGTAATTGGAAAATCCAAAAAATATATATAAA
TCAAATTATTACCCGCATGAAAGAGGCGATTACACTCTACTAAAATCATG
TTCATCACGTATGTAACCCAAAAATCCATTAAGGAAAGGTCGATAGCAGA
ACACCTTGTTGAACACCCTATCAAGGATGAGTATGAGTTTAAGGATTGGT
TTCATGCCTCGATCCCCTGCTTTTATTCCAAAAATTTTGCATAAAAGTGT
TTACCAATTGAAAAACAAAATCAAGATGTGCTCAGTGACACAACCATGCC
AATCTGATCCCAGGTGGAAGGGGTTGAACTGAAGCCCCCATCTAAACTGA
TACAGCTAGGAAAGAGCTTCTCAACTTAGAAAAAGAAGAGTTTGGCTTAT
AGCAACATGGACTCCGGATTCTCAATGTATCCTTTGAATGCTTTCAACCA
TTCAGCACCAATCGCACCATCTATTACGCGATGATCACAACTTAATGTTA
CCGACATGAAGGAAGAAAATTTGTACTGATCTGGACCCAAGCCAGGGACA
ACCCTTTTCTCAGCAGATCCAACTGCAAGAATGCCAGATTGAGGAGGATT
GATAATGGCACAGAATTGCTTGATGCCGAAGGGTCCTCCCAAATTGGTAA
CTGTGAATGTGCCTCCCTCATAATCTTGTGGTTTCAAGCTGTTGTCTTTG
GCTTTCTGGGCCAACTGTCTGACCTCTTCAGCAATTGTGGATAAGCCTTT
CTTGTCAGCATCCCTTATAACTGGGACATAAAGACCGTTTTCTGTCTGCA
CTGCTACATTAATATTCACATTCTTAAATTGTCGGATATATTCATCAGCC
CATGAACTATTG
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