DT214601

Overview
NameDT214601
Unique NameDT214601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6531 contig Csv1_Contig6531:1..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_STAAW (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain MW2) GN=pdhC PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18
Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A  T+ GL VPV++ AD+K +  I++E+ +LA KA+D  L   + +G T T++N+G   G + F  +IN P+  IL +G   ++  P +   +   +  ++++LS DHR IDGA G   +   K  + NPE +L+
Sbjct:  293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGG-QWFTPVINHPEVAILGIGRIAQK--PIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLM 428          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_STAAU (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus GN=pdhC PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18
Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A  T+ GL VPV++ AD+K +  I++E+ +LA KA+D  L   + +G T T++N+G   G + F  +IN P+  IL +G   ++  P +   +   +  ++++LS DHR IDGA G   +   K  + NPE +L+
Sbjct:  293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGG-QWFTPVINHPEVAILGIGRIAQK--PIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLM 428          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_STAAS (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain MSSA476) GN=pdhC PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18
Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A  T+ GL VPV++ AD+K +  I++E+ +LA KA+D  L   + +G T T++N+G   G + F  +IN P+  IL +G   ++  P +   +   +  ++++LS DHR IDGA G   +   K  + NPE +L+
Sbjct:  293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGG-QWFTPVINHPEVAILGIGRIAQK--PIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLM 428          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_STAAR (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain MRSA252) GN=pdhC PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18
Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A  T+ GL VPV++ AD+K +  I++E+ +LA KA+D  L   + +G T T++N+G   G + F  +IN P+  IL +G   ++  P +   +   +  ++++LS DHR IDGA G   +   K  + NPE +L+
Sbjct:  293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGG-QWFTPVINHPEVAILGIGRIAQK--PIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLM 428          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_STAAN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain N315) GN=pdhC PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18
Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A  T+ GL VPV++ AD+K +  I++E+ +LA KA+D  L   + +G T T++N+G   G + F  +IN P+  IL +G   ++  P +   +   +  ++++LS DHR IDGA G   +   K  + NPE +L+
Sbjct:  293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGG-QWFTPVINHPEVAILGIGRIAQK--PIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLM 428          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_STAAM (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhC PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18
Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A  T+ GL VPV++ AD+K +  I++E+ +LA KA+D  L   + +G T T++N+G   G + F  +IN P+  IL +G   ++  P +   +   +  ++++LS DHR IDGA G   +   K  + NPE +L+
Sbjct:  293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGG-QWFTPVINHPEVAILGIGRIAQK--PIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLM 428          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_STAAC (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain COL) GN=pdhC PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18
Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A  T+ GL VPV++ AD+K +  I++E+ +LA KA+D  L   + +G T T++N+G   G + F  +IN P+  IL +G   ++  P +   +   +  ++++LS DHR IDGA G   +   K  + NPE +L+
Sbjct:  293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGG-QWFTPVINHPEVAILGIGRIAQK--PIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLM 428          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_HAEIN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Haemophilus influenzae GN=aceF PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18
Identity = 49/127 (38.58%), Postives = 79/127 (62.20%), Query Frame = -2
Query:  445 KNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWL 825
            K +NI VAV T NGL VPV ++ +KKG+  ++ E+ ++++KA++  L   D +GG FT+++LGG  G   F  I+N P+  IL  G ++  + P     ++     + ++LS DHRVIDGA GA ++
Sbjct:  429 KYINIGVAVDTPNGLVVPVFKNVNKKGIIELSRELMEVSKKAREGKLTASDMQGGCFTISSLGG-IGTTHFAPIVNAPEVAIL--GVSKSSMEPVWNGKEFAPRLILPMSLSFDHRVIDGADGARFI 552          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_ECOLI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Escherichia coli (strain K12) GN=aceF PE=1 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18
Identity = 49/127 (38.58%), Postives = 78/127 (61.42%), Query Frame = -2
Query:  445 KNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWL 825
            K +NI VAV T NGL VPV +D +KKG+  ++ E+  +++KA+D  L   + +GG FT++++GG  G   F  I+N P+  IL  G ++  + P     ++     + ++LS DHRVIDGA GA ++
Sbjct:  492 KYINIGVAVDTPNGLVVPVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGG-LGTTHFAPIVNAPEVAIL--GVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFI 615          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_YEAST (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Saccharomyces cerevisiae GN=KGD2 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.642e-18
Identity = 55/139 (39.57%), Postives = 79/139 (56.83%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            +I+VAV T  GL  PV+R+A+   +  I  E+ +L+ KA+D  L  +D  GGTFT++N GG FG      IIN PQ+ +L +   ++R V   G  Q      M + L+ DHR++DG     +LK  K  IE+P  MLL
Sbjct:  327 DISVAVATPKGLVTPVVRNAESLSVLDIENEIVRLSHKARDGKLTLEDMTGGTFTISN-GGVFGSLYGTPIINSPQTAVLGLHGVKERPVTVNG--QIVSRPMMYLALTYDHRLLDGREAVTFLKTVKELIEDPRKMLL 462          
The following BLAST results are available for this feature:
BLAST of DT214601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
ODP2_STAAW1.186e-1835.25Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAU1.186e-1835.25Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAS1.186e-1835.25Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAR1.186e-1835.25Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAN1.186e-1835.25Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAM1.186e-1835.25Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAC1.186e-1835.25Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_HAEIN1.186e-1838.58Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_ECOLI1.186e-1838.58Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_YEAST2.642e-1839.57Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N13_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0006c_G07_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214601 ID=DT214601; Name=DT214601; organism=Citrus sinensis; type=EST; length=862bp
GTTGTTTCACACAACACTGGTAATTGGAAAATCCAAAAAATATATATAAA
TCAAATTATTACCCGCATGAAAGAGGCGATTACACTCTACTAAAATCATG
TTCATCACGTATGTAACCCAAAAATCCATTAAGGAAAGGTCGATAGCAGA
ACACCTTGTTGAACACCCTATCAAGGATGAGTATGAGTTTAAGGATTGGT
TTCATGCCTCGATCCCCTGCTTTTATTCCAAAAATTTTGCATAAAAGTGT
TTACCAATTGAAAAACAAAATCAAGATGTGCTCAGTGACACAACCATGCC
AATCTGATCCCAGGTGGAAGGGGTTGAACTGAAGCCCCCATCTAAACTGA
TACAGCTAGGAAAGAGCTTCTCAACTTAGAAAAAGAAGAGTTTGGCTTAT
AGCAACATGGACTCCGGATTCTCAATGTATCCTTTGAATGCTTTCAACCA
TTCAGCACCAATCGCACCATCTATTACGCGATGATCACAACTTAATGTTA
CCGACATGAAGGAAGAAAATTTGTACTGATCTGGACCCAAGCCAGGGACA
ACCCTTTTCTCAGCAGATCCAACTGCAAGAATGCCAGATTGAGGAGGATT
GATAATGGCACAGAATTGCTTGATGCCGAAGGGTCCTCCCAAATTGGTAA
CTGTGAATGTGCCTCCCTCATAATCTTGTGGTTTCAAGCTGTTGTCTTTG
GCTTTCTGGGCCAACTGTCTGACCTCTTCAGCAATTGTGGATAAGCCTTT
CTTGTCAGCATCCCTTATAACTGGGACATAAAGACCGTTTTCTGTCTGCA
CTGCTACATTAATATTCACATTCTTAAATTGTCGGATATATTCATCAGCC
CATGAACTATTG
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