DT214592

Overview
NameDT214592
Unique NameDT214592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig619 contig Csv1_Contig619:689..1412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SERP5 (NAD-dependent malic enzyme OS=Serratia proteamaculans (strain 568) GN=sfcA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11
Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E   E+   W++G A+ A+GSPF PV Y  +     Q NN+YIFP     ++ SGA  V D M
Sbjct:  410 RPIVMPLSNPTSRVEARPEDIINWTEGAALVATGSPFAPVHYKEQQIPIAQCNNSYIFPGIGLGVLASGATRVTDAM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO12_VIBVY (NAD-dependent malic enzyme 2 OS=Vibrio vulnificus (strain YJ016) GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11
Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = -1
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            E+PV+  LSNPTS+ E   E+   W++GQAI A+GSPF  V   GK +   Q NN+YIFP     +I + A  V +EM
Sbjct:  404 ERPVVMPLSNPTSRVEAKPEDILMWTQGQAIVATGSPFPDVVLAGKRYPIAQCNNSYIFPGVGLGVISANAHRVTNEM 481          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAOX_MYCTU (Putative malate oxidoreductase [NAD] OS=Mycobacterium tuberculosis GN=mez PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = -1
Query:  481 PVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 708
            P+IF LSNPTS+ E    +   WS G+A+ A+GSP  PVE++   +V GQ NN   FP     +I++GA  +   M
Sbjct:  403 PMIFPLSNPTSRMEAIPADVLAWSNGRALLATGSPVAPVEFDETTYVIGQANNVLAFPGIGLGVIVAGARLITRRM 478          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = -1
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            E+PVIF +SNPT + E TAE+   WS G+A  A+G P   + Y G  +  GQ NN+ I+P     ++ S A  + DEM
Sbjct:  394 ERPVIFPISNPTKKMETTAEQVIEWSDGKAFVATGVPSGTISYKGVDYQIGQANNSLIYPGLGLGMLASEAKLLTDEM 471          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA7 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain PA7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T +E   W+ GQA+ A+GSPF PV+   +     Q NNAYIFP     +I + A  V D M
Sbjct:  409 QPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDRRMPIAQCNNAYIFPGIGLGVIAARATRVTDGM 485          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAE (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa GN=sfcA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = -1
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            ++P++  LSNPTS+ E T +E   W+ GQA+ A+GSPF PV+   K     Q NNAYIFP     +I + A  V + M
Sbjct:  408 KQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDKRIPIAQCNNAYIFPGIGLGVIAARANRVTEGM 485          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAB (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sfcA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = -1
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            ++P++  LSNPTS+ E T +E   W+ GQA+ A+GSPF PV+   K     Q NNAYIFP     +I + A  V + M
Sbjct:  408 KQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDKRIPIAQCNNAYIFPGIGLGVIAARANRVTEGM 485          
The following BLAST results are available for this feature:
BLAST of DT214592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
MAO1_SERP52.361e-1142.86NAD-dependent malic enzyme OS=Serratia proteamacul... [more]
MAO12_VIBVY3.084e-1146.15NAD-dependent malic enzyme 2 OS=Vibrio vulnificus ... [more]
MAOX_MYCTU4.027e-1142.11Putative malate oxidoreductase [NAD] OS=Mycobacter... [more]
MLES_LACLA5.260e-1142.31Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]
MAO1_PSEA75.260e-1144.16NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEAE8.972e-1143.59NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEAB8.972e-1143.59NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_04H04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0004d_D02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214592 ID=DT214592; Name=DT214592; organism=Citrus sinensis; type=EST; length=726bp
TTTATTTCTGCTGAAACTAGGAAAGTTGGTATCATTTTCAATCAATAAAG
GAACAAAAAGAAAAAGGAGGTTCCTGATAGCAATGCTAAGAACCTCTACA
TGATTAAAACAAACCAAAATAGAAAACTAAATTTAAACTGATAAACAGGC
GACAAAGAAATATTAAAAAGAACAAAAATTAATATAACTAGGTTCGCAGC
AAATTGCAAAATGCAAACTATAATCGCACACTTCCACATGGAGTTCAGTT
CAACGGTAGCTTCGGTACATTGGGCTGTACATGCAGCTCTCAGCGTAACT
CACTAAATCCTTAGGACAAGGAAAACGGGAAGCCAGACCAAGGTCATATG
CCTTGGCAGCAACTTTAGCAGCAATGTGGGCAGAGATCTTTCTGATATTA
GTGAAGGGGGGGTATATCAATCCCTTATCGAAGTGCTCTTGTGTCACTTG
CGCTGCCAAAGCTTCCGAGGCTGCTAGAAGCATCTCATCGCGGACACAAA
TTGCACCGGATATTATCAAACCCAGACCCAATCCGGGGAATATATAAGCA
TTGTTTCCCTGGCCAGGCACAAAAACTTTCCCATTGTATTCAACAGGGTC
AAATGGGCTTCCACTAGCAAAGATTGCTTGACCCTTACTCCATGTATAAG
CTTCTTCCGCTGTACACTCAAACTGTGAGGTAGGATTGGATAGAGCAAAA
ATAACGGGTTTCTCATTAAAGGATGC
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