DT214592

Overview
NameDT214592
Unique NameDT214592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig619 contig Csv1_Contig619:689..1412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.523e-26
Identity = 66/150 (44.00%), Postives = 82/150 (54.67%), Query Frame = -1
Query:  265 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMY 714
            EKP++FALSNPT+  ECTAE+AY W+ G+ IFASGSPF PVEY GK FVPGQGNN YIFP       +  A  V D M         + V       G IYP   +IR             AY+ G+A + P P ++ +  +S  Y P Y
Sbjct:  391 EKPIVFALSNPTTNAECTAEQAYQWTDGRCIFASGSPFKPVEYKGKTFVPGQGNNMYIFPGLGLAASVCEAKHVTDAMIITAAKTLASFVEDSEVLTGKIYPGLQHIREISTRIAVKVIEKAYEEGMA-QLPRPDNIEALVKSRQYVPSY 539          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.018e-19
Identity = 63/156 (40.38%), Postives = 80/156 (51.28%), Query Frame = -1
Query:  265 ASFNEKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPK--DLVSYAESCMYSPMY 726
            AS+ EKP IF LSNPTS+ ECTAEEA  ++ G  IFASGSPFDPVE+ GK     Q NN+Y FP     L+ S A  V  E          +  T E    G I+P   N+R             A  + +A++FP PK  D   + +  M+ P Y
Sbjct:  430 ASYCEKPGIFPLSNPTSRSECTAEEAVEFTDGNLIFASGSPFDPVEWKGKTIQTNQCNNSYSFPGIGLGLVSSRATRVPFETFQVCARVIASLGTPEMLATGKIFPDLDNLRAVSLEVGIEVAKMAERMNIATQFP-PKGMDWREWLKHNMWQPEY 584          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_COLP3 (NAD-dependent malic enzyme OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sfcA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.401e-18
Identity = 55/158 (34.81%), Postives = 75/158 (47.47%), Query Frame = -1
Query:  241 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 714
            E P+IF LSNP+ Q E T  +   W++GQ I A+GSPFDP+EY GK F   Q NN+YIFP     ++ +    + D M         A     + +   + PP T+I              AY  GLA       +L++  E   + P YR YR T L
Sbjct:  406 EMPIIFPLSNPSRQVEATPSQVINWTQGQVIIATGSPFDPIEYQGKTFPIAQCNNSYIFPGVGLAVVAANISRITDGMLQVASETLAAASPLANGESDELLPPLTSIAQLSRDIAFAIAKVAYKQGLALEL-TDDELLAKIEHNFWKPEYRQYRRTSL 562          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ENTS8 (NAD-dependent malic enzyme OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sfcA PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 54/157 (34.39%), Postives = 76/157 (48.41%), Query Frame = -1
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T  +   W+ G A+ A+GSPF PV    K +   Q NNAYIFP     +I SGA+ V DEM         +     +   GL+ PP T+I+             A   G+A +    + L+   E   + P YRSYR T +
Sbjct:  411 RPIVMPLSNPTSRVEATPHDILNWTDGAALVATGSPFQPVTVKEKTYPIAQCNNAYIFPGIGLGIISSGALRVTDEMMMAASEALASHSPLVNTGSGLVLPPLTDIQQVSKDIAFAVGKMAQQQGVAVK-TSAEALLQAIEENFWLPEYRSYRRTSI 566          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ENT38 (NAD-dependent malic enzyme OS=Enterobacter sp. (strain 638) GN=sfcA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16
Identity = 52/158 (32.91%), Postives = 75/158 (47.47%), Query Frame = -1
Query:  241 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 714
            E+P++  LSNPTS+ E T ++   W++G A+ A+GSPFDPV +  KV+   Q NN+YIFP     +I SGA  + DEM                  +GL+ P   +I              A   G+A +      L    +   + P YRSYR T +
Sbjct:  409 ERPIVMPLSNPTSRVEATPQDIIVWTEGNALVATGSPFDPVIWKDKVYPIAQCNNSYIFPGIGLGVIASGASRITDEMLMSASETLAQHSPLVKNGEGLVLPELKDIHIVSRAIAFAVGKMAQQQGVAVKTSADA-LQQAIDENFWMPEYRSYRRTSI 565          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHEFN (NAD-dependent malic enzyme OS=Shewanella frigidimarina (strain NCIMB 400) GN=sfcA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16
Identity = 53/157 (33.76%), Postives = 78/157 (49.68%), Query Frame = -1
Query:  247 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYA-ESCMYSPMYRSYR*T 714
            ++P++F LSNPTS+ E T ++   W+ GQA+ A+GSPF+PV  NG+ F   Q NN++IFP     ++  GA  V DEM                   G + P   +I+             A D GLA   PC  +L+  + E+  + P YR Y+ T
Sbjct:  406 KRPIVFPLSNPTSRVEATPKDILNWTSGQALVATGSPFEPVIVNGETFEIAQCNNSFIFPGIGLGVLSCGARRVSDEMLMASSRALAECSPLGKDGVGSLLPRLEDIQTVSKYIAFAVAKAAIDQGLA--LPCTDELLQQSIEANFWEPEYRRYKRT 560          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = -1
Query:  391 SFNEKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIR 723
            S + +P IFA+SNPT   ECT EEA++      ++ASGSPF  V+  NGK+    QGNN Y+FP     +++SG+  + D M           +T E    G+IYP  + IR
Sbjct:  452 STSTRPAIFAMSNPTKNAECTPEEAFSIVGDHVVYASGSPFKDVDLGNGKIGHVNQGNNMYLFPGIGLGVLLSGSRIISDSMFQAAAERLAGYMTDEEVINGVIYPSISRIR 563          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 52/156 (33.33%), Postives = 78/156 (50.00%), Query Frame = -1
Query:  247 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYA-ESCMYSPMYRSYR*T 711
            +P++F LSNPTS+ E T ++   W+ GQA+ A+GSPF+PV  NG+ F   Q NN+YIFP     ++ +GA  V DEM                  +G + PP   I              A + G A   PC  +L++ + E+  ++  YR Y+ T
Sbjct:  407 RPIVFPLSNPTSRVEATPKDVLHWTNGQALVATGSPFEPVALNGETFEIAQCNNSYIFPGIGLGVLSAGAKRVSDEMLMASSRALAECSPLALNGEGPLLPPLEEIHQVSKHIAFAVAKVAVEQGHA--LPCTDELLAQSIENNFWTAEYRRYKRT 560          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.580e-15
Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = -1
Query:  241 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 714
            ++P++  LSNPTS+ E T  +   W++G A+ A+GSPFDPV +N K +   Q NN+YIFP     ++ SGA  V DEM                   G + PP  +I              A +   A +    K L+   ES  + P Y  Y+ T L
Sbjct:  402 KRPIVLPLSNPTSRVEATPSDIIRWTEGDALIATGSPFDPVIFNEKTYPIAQCNNSYIFPGIGLGVLASGATRVTDEMLMESSRVLAECSPLAQNGNGALLPPLKDIHQVSHCIALAVAKKAVEQNKAPQ-RTEKQLLEKIESYFWKPEYLKYKRTAL 558          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15
Identity = 50/157 (31.85%), Postives = 75/157 (47.77%), Query Frame = -1
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  KV+   Q NNAYIFP     +I SGA  + DEM               +  +GL+ P   +I+             A   G+A +    + L    +   + P YR YR T +
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYRRTSI 565          
The following BLAST results are available for this feature:
BLAST of DT214592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
MAOX_DICDI1.523e-2644.00NADP-dependent malic enzyme OS=Dictyostelium disco... [more]
MAOH_NEOFR4.018e-1940.38Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO1_COLP33.401e-1834.81NAD-dependent malic enzyme OS=Colwellia psychreryt... [more]
MAO1_ENTS83.761e-1734.39NAD-dependent malic enzyme OS=Enterobacter sakazak... [more]
MAO1_ENT383.184e-1632.91NAD-dependent malic enzyme OS=Enterobacter sp. (st... [more]
MAO1_SHEFN4.158e-1633.76NAD-dependent malic enzyme OS=Shewanella frigidima... [more]
MAOM_AMAHP7.092e-1639.29NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]
MAO1_SHEWM9.263e-1633.33NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]
MAO12_PHOPR1.580e-1532.28NAD-dependent malic enzyme 2 OS=Photobacterium pro... [more]
MAO1_SALTY2.064e-1531.85NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_04H04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0004d_D02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214592 ID=DT214592; Name=DT214592; organism=Citrus sinensis; type=EST; length=726bp
TTTATTTCTGCTGAAACTAGGAAAGTTGGTATCATTTTCAATCAATAAAG
GAACAAAAAGAAAAAGGAGGTTCCTGATAGCAATGCTAAGAACCTCTACA
TGATTAAAACAAACCAAAATAGAAAACTAAATTTAAACTGATAAACAGGC
GACAAAGAAATATTAAAAAGAACAAAAATTAATATAACTAGGTTCGCAGC
AAATTGCAAAATGCAAACTATAATCGCACACTTCCACATGGAGTTCAGTT
CAACGGTAGCTTCGGTACATTGGGCTGTACATGCAGCTCTCAGCGTAACT
CACTAAATCCTTAGGACAAGGAAAACGGGAAGCCAGACCAAGGTCATATG
CCTTGGCAGCAACTTTAGCAGCAATGTGGGCAGAGATCTTTCTGATATTA
GTGAAGGGGGGGTATATCAATCCCTTATCGAAGTGCTCTTGTGTCACTTG
CGCTGCCAAAGCTTCCGAGGCTGCTAGAAGCATCTCATCGCGGACACAAA
TTGCACCGGATATTATCAAACCCAGACCCAATCCGGGGAATATATAAGCA
TTGTTTCCCTGGCCAGGCACAAAAACTTTCCCATTGTATTCAACAGGGTC
AAATGGGCTTCCACTAGCAAAGATTGCTTGACCCTTACTCCATGTATAAG
CTTCTTCCGCTGTACACTCAAACTGTGAGGTAGGATTGGATAGAGCAAAA
ATAACGGGTTTCTCATTAAAGGATGC
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