DT214592

Overview
NameDT214592
Unique NameDT214592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig619 contig Csv1_Contig619:689..1412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHIF8 (NAD-dependent malic enzyme OS=Shigella flexneri serotype 5b (strain 8401) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = -1 
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM                  +GL+ P   +I+             A   G+A +    + L    +   +   YR YR T +
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565
[Close]
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHIBS (NAD-dependent malic enzyme OS=Shigella boydii serotype 4 (strain Sb227) GN=sfcA PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = -1 
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM                  +GL+ P   +I+             A   G+A +    + L    +   +   YR YR T +
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565
[Close]
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHIB3 (NAD-dependent malic enzyme OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = -1 
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM                  +GL+ P   +I+             A   G+A +    + L    +   +   YR YR T +
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565
[Close]
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHESR (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = -1 
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            E+P+IF LSNPTS+ E T ++   W+ GQA+ A+GSPF+PV  +G+ +   Q NN++IFP     ++ SGA  V D M
Sbjct:  406 ERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAM 483
[Close]
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHESM (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = -1 
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            E+P+IF LSNPTS+ E T ++   W+ GQA+ A+GSPF+PV  +G+ +   Q NN++IFP     ++ SGA  V D M
Sbjct:  406 ERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAM 483
[Close]
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_SHESA (NAD-dependent malic enzyme OS=Shewanella sp. (strain ANA-3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = -1 
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            E+P+IF LSNPTS+ E T ++   W+ GQA+ A+GSPF+PV  +G+ +   Q NN++IFP     ++ SGA  V D M
Sbjct:  406 ERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAM 483
[Close]
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ESCF3 (NAD-dependent malic enzyme OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = -1 
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM                  +GL+ P   +I+             A   G+A +    + L    +   +   YR YR T +
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565
[Close]
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECOSM (NAD-dependent malic enzyme OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = -1 
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM                  +GL+ P   +I+             A   G+A +    + L    +   +   YR YR T +
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565
[Close]
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLU (NAD-dependent malic enzyme OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = -1 
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM                  +GL+ P   +I+             A   G+A +    + L    +   +   YR YR T +
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565
[Close]
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECO8A (NAD-dependent malic enzyme OS=Escherichia coli O8 (strain IAI1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = -1 
Query:  241 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEMXXXXXXXXXAQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXAYDLGLASRFPCPKDLVSYAESCMYSPMYRSYR*TEL 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM                  +GL+ P   +I+             A   G+A +    + L    +   +   YR YR T +
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565
The following BLAST results are available for this feature:
BLAST of DT214592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
MAO1_SHIF81.479e-1329.94NAD-dependent malic enzyme OS=Shigella flexneri se... [more]
MAO1_SHIBS1.479e-1329.94NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_SHIB31.479e-1329.94NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_SHESR1.479e-1346.15NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHESM1.479e-1346.15NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHESA1.479e-1346.15NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_ESCF31.479e-1329.94NAD-dependent malic enzyme OS=Escherichia ferguson... [more]
MAO1_ECOSM1.479e-1329.94NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLU1.479e-1329.94NAD-dependent malic enzyme OS=Escherichia coli O17... [more]
MAO1_ECO8A1.479e-1329.94NAD-dependent malic enzyme OS=Escherichia coli O8 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_04H04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0004d_D02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214592 ID=DT214592; Name=DT214592; organism=Citrus sinensis; type=EST; length=726bp
TTTATTTCTGCTGAAACTAGGAAAGTTGGTATCATTTTCAATCAATAAAG
GAACAAAAAGAAAAAGGAGGTTCCTGATAGCAATGCTAAGAACCTCTACA
TGATTAAAACAAACCAAAATAGAAAACTAAATTTAAACTGATAAACAGGC
GACAAAGAAATATTAAAAAGAACAAAAATTAATATAACTAGGTTCGCAGC
AAATTGCAAAATGCAAACTATAATCGCACACTTCCACATGGAGTTCAGTT
CAACGGTAGCTTCGGTACATTGGGCTGTACATGCAGCTCTCAGCGTAACT
CACTAAATCCTTAGGACAAGGAAAACGGGAAGCCAGACCAAGGTCATATG
CCTTGGCAGCAACTTTAGCAGCAATGTGGGCAGAGATCTTTCTGATATTA
GTGAAGGGGGGGTATATCAATCCCTTATCGAAGTGCTCTTGTGTCACTTG
CGCTGCCAAAGCTTCCGAGGCTGCTAGAAGCATCTCATCGCGGACACAAA
TTGCACCGGATATTATCAAACCCAGACCCAATCCGGGGAATATATAAGCA
TTGTTTCCCTGGCCAGGCACAAAAACTTTCCCATTGTATTCAACAGGGTC
AAATGGGCTTCCACTAGCAAAGATTGCTTGACCCTTACTCCATGTATAAG
CTTCTTCCGCTGTACACTCAAACTGTGAGGTAGGATTGGATAGAGCAAAA
ATAACGGGTTTCTCATTAAAGGATGC
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