DT214592

Overview
NameDT214592
Unique NameDT214592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig619 contig Csv1_Contig619:689..1412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_PROMH (NAD-dependent malic enzyme OS=Proteus mirabilis (strain HI4320) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = -1
Query:  481 EKPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 714
            E+P +  LSNPTS+ E   E+   W+ GQA+ A+GSPF PV Y  KV+   Q NN+YIFP     +I SGA  V D M
Sbjct:  409 ERPTVMPLSNPTSRVEARPEDIINWTDGQALVATGSPFAPVTYKEKVYPIAQCNNSYIFPGIGLGVIASGAKRVTDAM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECOUT (NAD-dependent malic enzyme OS=Escherichia coli (strain UTI89 / UPEC) GN=sfcA PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLI (NAD-dependent malic enzyme OS=Escherichia coli (strain K12) GN=sfcA PE=3 SV=4)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLC (NAD-dependent malic enzyme OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECOL6 (NAD-dependent malic enzyme OS=Escherichia coli O6 GN=sfcA PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECOL5 (NAD-dependent malic enzyme OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECOK1 (NAD-dependent malic enzyme OS=Escherichia coli O1:K1 / APEC GN=sfcA PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECOHS (NAD-dependent malic enzyme OS=Escherichia coli O9:H4 (strain HS) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECODH (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / DH10B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of DT214592 vs. ExPASy Swiss-Prot
Match: MAO1_ECOBW (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / BW2952) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -1
Query:  481 KPVIFALSNPTSQFECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXLIISGAICVRDEM 711
            +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP     +I SGA  + DEM
Sbjct:  410 RPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
The following BLAST results are available for this feature:
BLAST of DT214592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
MAO1_PROMH1.931e-1348.72NAD-dependent malic enzyme OS=Proteus mirabilis (s... [more]
MAO1_ECOUT1.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLI1.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLC1.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOL61.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli O6 ... [more]
MAO1_ECOL51.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli O6:... [more]
MAO1_ECOK11.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli O1:... [more]
MAO1_ECOHS1.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli O9:... [more]
MAO1_ECODH1.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOBW1.931e-1344.16NAD-dependent malic enzyme OS=Escherichia coli (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_04H04_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0004d_D02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214592 ID=DT214592; Name=DT214592; organism=Citrus sinensis; type=EST; length=726bp
TTTATTTCTGCTGAAACTAGGAAAGTTGGTATCATTTTCAATCAATAAAG
GAACAAAAAGAAAAAGGAGGTTCCTGATAGCAATGCTAAGAACCTCTACA
TGATTAAAACAAACCAAAATAGAAAACTAAATTTAAACTGATAAACAGGC
GACAAAGAAATATTAAAAAGAACAAAAATTAATATAACTAGGTTCGCAGC
AAATTGCAAAATGCAAACTATAATCGCACACTTCCACATGGAGTTCAGTT
CAACGGTAGCTTCGGTACATTGGGCTGTACATGCAGCTCTCAGCGTAACT
CACTAAATCCTTAGGACAAGGAAAACGGGAAGCCAGACCAAGGTCATATG
CCTTGGCAGCAACTTTAGCAGCAATGTGGGCAGAGATCTTTCTGATATTA
GTGAAGGGGGGGTATATCAATCCCTTATCGAAGTGCTCTTGTGTCACTTG
CGCTGCCAAAGCTTCCGAGGCTGCTAGAAGCATCTCATCGCGGACACAAA
TTGCACCGGATATTATCAAACCCAGACCCAATCCGGGGAATATATAAGCA
TTGTTTCCCTGGCCAGGCACAAAAACTTTCCCATTGTATTCAACAGGGTC
AAATGGGCTTCCACTAGCAAAGATTGCTTGACCCTTACTCCATGTATAAG
CTTCTTCCGCTGTACACTCAAACTGTGAGGTAGGATTGGATAGAGCAAAA
ATAACGGGTTTCTCATTAAAGGATGC
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