DT214585

Overview
NameDT214585
Unique NameDT214585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1656 contig Csv1_Contig1656:741..1646. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214585 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = -3
Query:  647 KGYDGRAFDVWSCGVILFVLMAGFLPFDESNLMALYRKICRADFSCPSWFSSGAKKLIKRILDPNXDTRMTISQMLEDEWFKKGYK 904
            K YDG   DVWS GVIL+ L++G LPFD  NL  L  ++ R  +  P + S+  + L+K+ L  N   R T+ Q+++D W   G++
Sbjct:  224 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 309          
BLAST of DT214585 vs. ExPASy Swiss-Prot
Match: KIN1_SCHPO (Protein kinase kin1 OS=Schizosaccharomyces pombe GN=kin1 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 49/174 (28.16%), Postives = 85/174 (48.85%), Query Frame = -3
Query:  404 YDGRAFDVWSCGVILFVLMAGFLPFDESNLMALYRKICRADFSCPSWFSSGAKKLIKRILDPNXDTRMTISQMLEDEWFKKGYK--PPHFDKEEE-VNLD-DVDAI-----FNDSKENLVTEKKEKPVSMNAFELISRTKSFSLENLFEKQTGLVKRETRFTSQRPPNEIMSKI 898
            Y G   DVWS G++L+VL+ G +PFD+ N+ AL+ KI +     PS+ SS  K L+ R+L  +   R T+ ++L   W  + Y+  P  F  E   + L  D + I     F+      +  +  K +S  A++ +++T  +S  N  +K+    +   R  +    N I+  +
Sbjct:  317 YIGPEVDVWSFGIVLYVLVCGKVPFDDQNMSALHAKIKKGTVEYPSYLSSDCKGLLSRMLVTDPLKRATLEEVLNHPWMIRNYEGPPASFAPERSPITLPLDPEIIREMNGFDFGPPEKIVRELTKVISSEAYQSLAKTGFYSGPNSADKKKSFFEFRIRHAAHDIENPILPSL 490          
BLAST of DT214585 vs. ExPASy Swiss-Prot
Match: Y7165_DICDI (Probable serine/threonine-protein kinase DDB_G0277165 OS=Dictyostelium discoideum GN=DDB_G0277165 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 37/100 (37.00%), Postives = 56/100 (56.00%), Query Frame = -3
Query:  608 YDGRAFDVWSCGVILFVLMAGFLPFDESNLMALYRKICRADFSCPSWFSSGAKKLIKRILDPNXDTRMTISQMLEDEWFKKGYKPPHFDKE---EEVNLD 898
            YDG+  DVWSCGVIL+ L+ G LPFD+ N+  L  K+    FS P +    A+ L+ ++L  +   R++I ++ E  WF   +    F K    EE+N +
Sbjct:  184 YDGQKADVWSCGVILYALLTGKLPFDDENIRRLLNKVKNGAFSMPPYIHKDAQDLLTKMLTVDPSKRISIKEIKEHPWFVSNFN--QFQKATPVEEINAE 281          
BLAST of DT214585 vs. ExPASy Swiss-Prot
Match: BRSK2_MOUSE (BR serine/threonine-protein kinase 2 OS=Mus musculus GN=Brsk2 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.374e-12
Identity = 40/120 (33.33%), Postives = 63/120 (52.50%), Query Frame = -3
Query:  569 YDGRAFDVWSCGVILFVLMAGFLPFDESNLMALYRKICRADFSCPSWFSSGAKKLIKRILDPNXDTRMTISQMLEDEWFKKGYKPPHFDKEEEV----------NLDDVDAIFNDSKENL 898
            YDGR  DVWSCGVILF L+ G LPFD+ NL  L  K+ R  F  P +     + L++ +++ +   R+T+  + +  W+  G   P  + E+ +          +L+D+D    DS  +L
Sbjct:  193 YDGRKADVWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVDAARRLTLEHIQKHIWYIGGKNEP--EPEQPIPRKVQIRSLPSLEDIDPDVLDSMHSL 310          
BLAST of DT214585 vs. ExPASy Swiss-Prot
Match: BRSK2_HUMAN (BR serine/threonine-protein kinase 2 OS=Homo sapiens GN=BRSK2 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.374e-12
Identity = 40/120 (33.33%), Postives = 63/120 (52.50%), Query Frame = -3
Query:  569 YDGRAFDVWSCGVILFVLMAGFLPFDESNLMALYRKICRADFSCPSWFSSGAKKLIKRILDPNXDTRMTISQMLEDEWFKKGYKPPHFDKEEEV----------NLDDVDAIFNDSKENL 898
            YDGR  DVWSCGVILF L+ G LPFD+ NL  L  K+ R  F  P +     + L++ +++ +   R+T+  + +  W+  G   P  + E+ +          +L+D+D    DS  +L
Sbjct:  192 YDGRKADVWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVDAARRLTLEHIQKHIWYIGGKNEP--EPEQPIPRKVQIRSLPSLEDIDPDVLDSMHSL 309          
BLAST of DT214585 vs. ExPASy Swiss-Prot
Match: KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = -3
Query:  659 KGYDGRAFDVWSCGVILFVLMAGFLPFDESNLMALYRKICRADFSCPSWFSSGAKKLIKRILDPNXDTRMTISQMLEDEWFK 904
            K Y G   DVWSCGVIL+ L+ G LPFD+ N+  L++KI    ++ PS  S GA+ LI R+L  +   R+TI ++ +  WF+
Sbjct:  214 KLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRVTIPEIRQHPWFQ 295          
BLAST of DT214585 vs. ExPASy Swiss-Prot
Match: BRSK1_MOUSE (BR serine/threonine-protein kinase 1 OS=Mus musculus GN=Brsk1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = -3
Query:  641 YDGRAFDVWSCGVILFVLMAGFLPFDESNLMALYRKICRADFSCPSWFSSGAKKLIKRILDPNXDTRMTISQMLEDEWFKKGYKPP 898
            YDGR  D+WSCGVILF L+ G LPFD+ NL  L  K+ R  F  P +     + L++ +++   + R+++ Q+ +  W+  G   P
Sbjct:  207 YDGRRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVEPEKRLSLEQIQKHPWYLGGKHEP 292          
BLAST of DT214585 vs. ExPASy Swiss-Prot
Match: BRSK1_HUMAN (BR serine/threonine-protein kinase 1 OS=Homo sapiens GN=BRSK1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = -3
Query:  641 YDGRAFDVWSCGVILFVLMAGFLPFDESNLMALYRKICRADFSCPSWFSSGAKKLIKRILDPNXDTRMTISQMLEDEWFKKGYKPP 898
            YDGR  D+WSCGVILF L+ G LPFD+ NL  L  K+ R  F  P +     + L++ +++   + R+++ Q+ +  W+  G   P
Sbjct:  223 YDGRRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVEPEKRLSLEQIQKHPWYLGGKHEP 308          
BLAST of DT214585 vs. ExPASy Swiss-Prot
Match: SIK3_HUMAN (Serine/threonine-protein kinase SIK3 OS=Homo sapiens GN=SIK3 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 34/92 (36.96%), Postives = 55/92 (59.78%), Query Frame = -3
Query:  629 KGYDGRAFDVWSCGVILFVLMAGFLPFDESNLMALYRKICRADFSCPSWFSSGAKKLIKRILDPNXDTRMTISQMLEDEWFKKGYKPPHFDK 904
            K YDG   D+WS GV+L+VL+ G LPFD S L  L  ++    F  P + S+  + LI+ +L  + + R+++ Q+ + +W K G   P+FD+
Sbjct:  179 KEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPNKRLSMEQICKHKWMKLGDADPNFDR 270          
BLAST of DT214585 vs. ExPASy Swiss-Prot
Match: SIK3_MOUSE (Serine/threonine-protein kinase SIK3 OS=Mus musculus GN=Sik3 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = -3
Query:  629 KGYDGRAFDVWSCGVILFVLMAGFLPFDESNLMALYRKICRADFSCPSWFSSGAKKLIKRILDPNXDTRMTISQMLEDEWFKKGYKPPHFDK 904
            K YDG   D+WS GV+L+VL+ G LPFD S L  L  ++    F  P + S+  + LI+ +L  + + R+++ Q+   +W K G   P+FD+
Sbjct:  179 KEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPNKRLSMEQICRHKWMKLGDADPNFDR 270          
The following BLAST results are available for this feature:
BLAST of DT214585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
MARK2_HUMAN8.054e-1339.53Serine/threonine-protein kinase MARK2 OS=Homo sapi... [more]
KIN1_SCHPO8.054e-1328.16Protein kinase kin1 OS=Schizosaccharomyces pombe G... [more]
Y7165_DICDI1.052e-1237.00Probable serine/threonine-protein kinase DDB_G0277... [more]
BRSK2_MOUSE1.374e-1233.33BR serine/threonine-protein kinase 2 OS=Mus muscul... [more]
BRSK2_HUMAN1.374e-1233.33BR serine/threonine-protein kinase 2 OS=Homo sapie... [more]
KIN10_ARATH1.794e-1243.90SNF1-related protein kinase catalytic subunit alph... [more]
BRSK1_MOUSE1.794e-1237.21BR serine/threonine-protein kinase 1 OS=Mus muscul... [more]
BRSK1_HUMAN1.794e-1237.21BR serine/threonine-protein kinase 1 OS=Homo sapie... [more]
SIK3_HUMAN2.343e-1236.96Serine/threonine-protein kinase SIK3 OS=Homo sapie... [more]
SIK3_MOUSE3.060e-1236.96Serine/threonine-protein kinase SIK3 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02I16_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0002b_E08_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214585 ID=DT214585; Name=DT214585; organism=Citrus sinensis; type=EST; length=906bp
GGCTTTTAGTTCTGTCCACTTCATTTCGCCAGCGAATAACATTCATTTCC
TATTTCTTGAAAATGTGTTTGTACGCATTCACTTACAGAAACCAAAACAA
ATTAGAAGAATTAACTAATAATTGACCCATCTGCAGTTGTTGTCACGCCC
TTAATTCTTCTTTATTTTCTTCCGCTTGCCAGACAACATCTTTCAGTCCC
GATGAAAATTTTTTGTAGAACTTGTGAAACTCTAGCGTGTCGCCACCAGT
TTTGCGAACCTCCACAATGTGCAAAGTGGGAGCCACCTCAAACACCTCAG
TAGCTACAGAGAGCTGGCCTTTCCTTCCAGTTTTATCACCTTGTAACTTC
ATCTTGTAGTTTCCCTTGCGAACATTAAATCCAAGAGGCTTTGCAGCTTC
CTCAATTTTAGACATGATTTCATTTGGAGGGCGTTGGGAAGTAAAACGAG
TTTCTCGCTTCACAAGGCCCGTTTGTTTCTCAAACAAATTTTCAAGGCTG
AAACTCTTGGTCCTAGAGATTAGCTCGAAAGCATTCATTGATACAGGCTT
CTCTTTCTTCTCAGTTACAAGATTTTCCTTCGAGTCATTGAAGATAGCAT
CAACATCATCGAGATTCACTTCCTCTTCCTTATCAAAATGTGGTGGTTTG
TACCCTTTCTTGAACCATTCATCCTCTAACATTTGAGAAATAGTCATTCG
TGTATCANGGTTTGGATCAAGAATACGCTTGATTAGTTTCTTGGCACCAG
ATGAAAACCATGACGGACAAGAGAAATCAGCCCTGCAAATTTTTCTATAC
AAAGCCATAAGATTCGACTCATCAAAAGGCAAGAACCCAGCCATAAGTAC
AAAGAGAATAACCCCGCAGGACCAAACATCAAATGCTCTACCGTCGTATC
CCTTGT
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