DT214580

Overview
NameDT214580
Unique NameDT214580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DT214580_ssr648 microsatellite DT214580_ssr648:648..659. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10386 contig Csv1_Contig10386:23..865. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANKR1_MOUSE (Ankyrin repeat domain-containing protein 1 OS=Mus musculus GN=Ankrd1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.457e-14
Identity = 52/167 (31.14%), Postives = 78/167 (46.71%), Query Frame = -3
Query:  233 LRLALDNLSGSIDEPVEDRD----------TALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETV--------------------------DAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSEL 625
            L+ AL+N    +++ + D++          TALH  CL G+L  V+ L+E GA +E +D   +  +H AC GG  ++++LL+N  +      ++L T                           D EGDTPLH A R     +IRLL+  GA     N  GKTP +L
Sbjct:  125 LKAALENKLPVVEKFLSDKNSPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIEFRDMLESTAIHWACRGGNADVLKLLLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLMTFGADLKVKNCAGKTPMDL 291          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANR12_HUMAN (Ankyrin repeat domain-containing protein 12 OS=Homo sapiens GN=ANKRD12 PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.101e-13
Identity = 41/119 (34.45%), Postives = 70/119 (58.82%), Query Frame = -3
Query:  221 EDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSELPEPD 577
            E  +T LH+  + G +  V+ L+  GA++  KD  G  PLH+AC  G+ ++ ++LI  A+G +     + T   + DTPLH +A   H D+++LLL  G +P +AN +G+ P ++ E +
Sbjct:  183 ERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILI--AAGAD-----VNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETE 294          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANKR2_HUMAN (Ankyrin repeat domain-containing protein 2 OS=Homo sapiens GN=ANKRD2 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.454e-13
Identity = 49/148 (33.11%), Postives = 71/148 (47.97%), Query Frame = -3
Query:  233 GSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETV--------------------------DAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSEL 598
            GS D   + R TALH   L G++  ++ LL+ GA+++ +D      +H AC GG +E+V+LL +  + T    ++L T                           D EGDT LH A R     +I+LLL  GA     NL GKTP++L
Sbjct:  172 GSADTCDQFRRTALHRASLEGHMEILEKLLDNGATVDFQDRLDCTAMHWACRGGHLEVVKLLQSHGADTNVRDKLLSTPLHVAVRTGQVEIVEHFLSLGLEINARDREGDTALHDAVRLNRYKIIKLLLLHGADMMTKNLAGKTPTDL 319          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANKR1_XENLA (Ankyrin repeat domain-containing protein 1 OS=Xenopus laevis GN=ankrd1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.454e-13
Identity = 55/187 (29.41%), Postives = 82/187 (43.85%), Query Frame = -3
Query:  233 PHLRDLAAAAQLGDVHSL---RLALDNLSGSIDEPVED----------RDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLET--------------------------VDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSEL 676
            P +++      +GDV  +   + ALDN    I++ + D          + TALH  C  G+   V+ L+E GA++E KD   +  LH  C GG +E ++LL+N  +      ++L T                           D EGDTP+H   R     +IRLL+  G +    N  GKTP EL
Sbjct:  104 PVVKEPEPEETIGDVDQMTFFKAALDNKMSIIEKYLADGGDPNTCDEYKRTALHRACSEGHTAIVEKLIEAGANIEFKDMLESTALHWTCRGGSVETLKLLLNKGAAINARDKLLSTPLHVAVRTGYYECGEHLIACEADLNAKDREGDTPMHDGVRLNRYKMIRLLILYGVNLNIKNCAGKTPMEL 290          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANKR1_CHICK (Ankyrin repeat domain-containing protein 1 OS=Gallus gallus GN=ANKRD1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.454e-13
Identity = 55/166 (33.13%), Postives = 77/166 (46.39%), Query Frame = -3
Query:  233 RLALDNLSGSIDEPVEDRD----------TALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGT--------------------ECVKRM------LETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSEL 622
            R AL+N    I++ + D+           TALH  C  G+L  V+ L+E GA LE KD   +  LH AC GG +EIV+ L++                         +C + +      L   D EGDTP+H A R     ++RLL+  GA  T  N+ GKTP +L
Sbjct:  126 RAALENKLPVIEKYLSDKGDPNVCNEYKRTALHRACSEGHLEVVKKLVEAGALLELKDMLESTALHWACRGGNLEIVKFLLDKGINRNARDKLRSTPLHVAVRTGQHDCAEHLIACEADLNAKDREGDTPMHDAVRLNRYKMVRLLILYGADLTIKNVDGKTPMDL 291          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANKR1_BOVIN (Ankyrin repeat domain-containing protein 1 OS=Bos taurus GN=ANKRD1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.454e-13
Identity = 53/167 (31.74%), Postives = 79/167 (47.31%), Query Frame = -3
Query:  233 LRLALDNLSGSIDEPVEDRD----------TALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGT--------------------ECVKRM------LETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSEL 625
            L+ AL+N    I++ + D++          TALH  CL G+L  V+ L+E GA +E +D   +  +H A  GG +++++LL+N  +                      EC + +      L   D EGDTPLH A R     +IRLL+  GA     N  GKTP +L
Sbjct:  125 LKAALENKLPVIEKFLSDKNNPDVCDEYKRTALHRACLEGHLAIVEKLIEAGAQIEFRDMLESTAIHWASRGGSLDVLKLLLNKGAKISARDKLLSTPLHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLITYGADLNVKNCAGKTPMDL 291          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANKR1_PIG (Ankyrin repeat domain-containing protein 1 OS=Sus scrofa GN=ANKRD1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.205e-13
Identity = 51/167 (30.54%), Postives = 78/167 (46.71%), Query Frame = -3
Query:  233 LRLALDNLSGSIDEPVEDRD----------TALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETV--------------------------DAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSEL 625
            L+ AL+N    +++ + D++          TALH  CL G+L  V+ L+E GA +E +D   +  +H A  GG +++++LL+N  +      ++L T                           D EGDTPLH A R     +IRLL+  GA     N  GKTP +L
Sbjct:  125 LKAALENKLPVVEKFLSDKNNPDVCDEYKRTALHRACLEGHLAIVEKLIEAGAQIEFRDMLESTAIHWASRGGNLDVLKLLLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLITYGADLNVKNCAGKTPMDL 291          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANKR1_HUMAN (Ankyrin repeat domain-containing protein 1 OS=Homo sapiens GN=ANKRD1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13
Identity = 51/167 (30.54%), Postives = 78/167 (46.71%), Query Frame = -3
Query:  233 LRLALDNLSGSIDEPVEDRD----------TALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETV--------------------------DAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSEL 625
            L+ AL+N    +++ + D++          TALH  CL G+L  V+ L+E GA +E +D   +  +H A  GG +++++LL+N  +      ++L T                           D EGDTPLH A R     +IRLL+  GA     N  GKTP +L
Sbjct:  125 LKAALENKLPVVEKFLSDKNNPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIEFRDMLESTAIHWASRGGNLDVLKLLLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLIMYGADLNIKNCAGKTPMDL 291          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: AKR2_ARATH (Ankyrin repeat domain-containing protein 2 OS=Arabidopsis thaliana GN=AKR2 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.140e-13
Identity = 56/167 (33.53%), Postives = 83/167 (49.70%), Query Frame = -3
Query:  293 LGEKMAVPRNGMMEEDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLL 793
            LGE M +P  G+ ++  S E     E +      E E+  H       A LGDV  L+ AL +  G+ DE   +  TALH  C YG L C Q+L++ GAS+ A D++   PLH A   G  E V LL+ + +        L+ +D +  TP+  A     ++V++LL
Sbjct:  189 LGEAMGMPVAGLPDQTVSAEPEVAEEGE------EEESIVH-----QTASLGDVEGLKAALAS-GGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKNKNTPLHYAAGYGRKECVSLLLENGAAV-----TLQNLDEK--TPIDVAKLNSQLEVVKLL 336          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ASB10_HUMAN (Ankyrin repeat and SOCS box protein 10 OS=Homo sapiens GN=ASB10 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 60/173 (34.68%), Postives = 77/173 (44.51%), Query Frame = -3
Query:  173 ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSELPEPDTEARRILEVAASGQTC 691
            E  TP H+     AA  G    LRL L   +     P     TALH  C  G+  CV +LL  GA     D+DG  PLH     G +E  +LL+   +      R+    + E +TPLH AAR  HV++  LLL  GA P   N  G TP  L   D   + I +  A+   C
Sbjct:  115 ELTTPLHV-----AASRGHTEVLRLLLRRRARPDSAP--GGRTALHEACAAGHTACVHVLLVAGADPNIADQDGKRPLHLCRGPGTLECAELLLRFGA------RVDGRSEEEEETPLHVAARLGHVELADLLLRRGACPDARNAEGWTPL-LAACDVRCQSITDAEATTARC 273          
The following BLAST results are available for this feature:
BLAST of DT214580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ANKR1_MOUSE6.457e-1431.14Ankyrin repeat domain-containing protein 1 OS=Mus ... [more]
ANR12_HUMAN1.101e-1334.45Ankyrin repeat domain-containing protein 12 OS=Hom... [more]
ANKR2_HUMAN2.454e-1333.11Ankyrin repeat domain-containing protein 2 OS=Homo... [more]
ANKR1_XENLA2.454e-1329.41Ankyrin repeat domain-containing protein 1 OS=Xeno... [more]
ANKR1_CHICK2.454e-1333.13Ankyrin repeat domain-containing protein 1 OS=Gall... [more]
ANKR1_BOVIN2.454e-1331.74Ankyrin repeat domain-containing protein 1 OS=Bos ... [more]
ANKR1_PIG3.205e-1330.54Ankyrin repeat domain-containing protein 1 OS=Sus ... [more]
ANKR1_HUMAN5.467e-1330.54Ankyrin repeat domain-containing protein 1 OS=Homo... [more]
AKR2_ARATH7.140e-1333.53Ankyrin repeat domain-containing protein 2 OS=Arab... [more]
ASB10_HUMAN9.325e-1334.68Ankyrin repeat and SOCS box protein 10 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I15_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0001a_E08_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214580 ID=DT214580; Name=DT214580; organism=Citrus sinensis; type=EST; length=843bp
CTCATCAAGATGTATGGCCCCCTATCTCATTTAGGGTTCTGAAATCAATA
GATAACAAAGTTTTAATCGAATTCCAAACATACCTATCTATGAAAAAAAA
AAAAAAGTAACGAGAGCAGTCAAAACAGAAATAAAGTTCACATAATATCA
GCTATTTCGATAGAGATTACTGGCAGGTCTGACCACTAGCAGCAACTTCT
AGAATTCTCCTAGCCTCGGTGTCTGGCTCGGGTAACTCACTTGGGGTCTT
TCCATAGAGGTTTGCCTTTGTAGGAGAAGCACCAGAAGCCAGCAACAATC
TTATGACATCCACGTGTTCACCTCTTGCCGCATGATGAAGAGGAGTATCA
CCTTCAGCATCAACAGTTTCTAACATCCTTTTTACACATTCAGTGCCGCT
AGCACTATTAATTAGAAGTTGAACTATCTCAATAAACCCCCCAGCACAAG
CATCATGCAGAGGAATTGCTCCATCTTCATCCTTGGCCTCCAAACTAGCC
CCTCGTTCCAAGAGTAGCTGAACACAAGGCAGATAGCCATAGAGGCATGT
CAGATGGAGAGCAGTGTCCCTGTCTTCTACTGGTTCATCAATACTACCAC
TCAAGTTATCTAGAGCGAGACGGAGGGAATGAACGTCGCCGAGCTGAGCG
GCGGCGGCGAGGTCACGGAGGTGAGGTGGAGTTTCCGATTCGAGGTCCAT
ATTAACGCCGTCTTCTTCAAAGAGAGCGTTATCTTCTTCGCTATCATCTT
CCTCCATCATTCCGTTGCGCGGTACCGCCATTTTTTCTCCTAATTAACTT
TTTTATAACGGTGTTTTGCAGAGAAAAGTAGAATGAAAACCCT
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