DT214563

Overview
NameDT214563
Unique NameDT214563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214563 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 40/106 (37.74%), Postives = 56/106 (52.83%), Query Frame = -1
Query:  521 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEV 838
            G  GY+ PEY RT   T K DV+SFGVVLLE+IT +     T      K  + EW+    TN  ++  +D S+ G+     L + L +A +CV P+   R  M +V
Sbjct:  755 GSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTRE----KSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQV 856          
BLAST of DT214563 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 40/115 (34.78%), Postives = 60/115 (52.17%), Query Frame = -1
Query:  500 GDLGYVAPEY--PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 838
            G  GY+ PE+  P   + TPK DVY FGVVL EL+TG++P       E    +LV W+  L   +    AID  +   G + ++ + L++   C    P +R +M +V  LL+ I
Sbjct:  734 GSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKPIEDDYLDEK-DTNLVSWVRSLVRKNQASKAIDPKIQETGSEEQMEEALKIGYLCTADLPSKRPSMQQVVGLLKDI 847          
BLAST of DT214563 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.153e-11
Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = -1
Query:  500 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG-SLVEWI-TLLNTNSSLETAIDKSLLG--NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 838
            G  GY+APEY  T+  T K DVYS+GVVLLE+++G         P+   G  +VEW+   + T     + +D  L G  +    E+ Q L +A  CV P+P ER TM EV  LL  +
Sbjct:  940 GSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVE----PQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTLLMEV 1052          
BLAST of DT214563 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.153e-11
Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = -1
Query:  521 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEV 838
            G  GY+ PEY RT     K DVYSFG+VLLE+IT +    L       K  + EW+ L+ T   ++  +D  L G+   G + + + +A +C+ P+   R TM +V
Sbjct:  756 GTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQ----LVINQSREKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQV 857          
BLAST of DT214563 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.153e-11
Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = -1
Query:  500 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGN--GFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 838
            G  GYV PEY ++   + KGDVYS+GVVLLEL+TG+RP   T++P+    +LV W+   +    +    D  L+      + EL Q L+VA  C+      R TM +V  + + I
Sbjct: 1048 GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRP---TDSPDFGDNNLVGWVK-QHAKLRISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMVQVMAMFKEI 1158          
The following BLAST results are available for this feature:
BLAST of DT214563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
Y4245_ARATH7.008e-1137.74Probable LRR receptor-like serine/threonine-protei... [more]
Y2242_ARATH7.008e-1134.78Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH9.153e-1139.32Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH9.153e-1135.85Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
BRI1_ARATH9.153e-1137.39Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_20D11_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-20D11-H22-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214563 ID=DT214563; Name=DT214563; organism=Citrus sinensis; type=EST; length=865bp
TACTCAGTTACAAAGCAACCATAATAGCTTCAGCAAACAGGAGGATAAGC
CGCCACCCACAGGACACTAATTGGAAATTTACAACGCTAAAGGGAATGCC
AAAATGATTACAGTCACTGCAAAAAGCAACATTTTTTGCATCAATAATCA
GTCACAAAGCCAAAGGAGAACTTTTACGTATACAGCAGAGCTTCAGCATC
CTAGTTGACTATATATACAGTTAGTAGTTGAAACATAGGCAAGCTACTAA
AGATTGTTCATACTTTGTATAAATATACTGCTGAATATATGAATAAATTT
TACATCATTTCGGCTATTATAAAAAAAGAAAAACCAAATATCTTAAAAAC
ACCTTTCGTCATTGTATTGAACTTAATAAATACCAACGCCATGCATAAAA
TTACGTGTAAGCAACAATAAGTTCATCAGGAAAATTGGGATCGCCTGTGT
TAGATGGCAGCATGATCTCATCATCAGTTGTGAAATGATACCTCTCCGCA
ATGGCTCTGAGAAGCTGATACACTTCAAACATGGTGTGTCTCTCCTTTGG
AGTTGGCAACACACAGTTACAAGCAACCCTAAGAAATTGGTGGAGTTCAC
CATCAAAACCATTTCCAAGCAGGGACTTATCAATTGCAGTTTCCAGAGAA
GAGTTAGTGTTCAGAAGTGTGATCCACTCCACTAAACTTCCCTTGAAGCT
CTCAGGGGCATTAGTTAAATGAGTTGGTCTCTCACCTGTGATCAGTTCCA
GGAGAACAACTCCAAAGCTATAAACATCCCCCTTTGGGGTGGCTACCAGC
GTCCGTGGATATTCAGGAGCAACATAACCTAAATCTCCGAACTCCCCATT
GACAAAAGTACTCAA
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