DT214536

Overview
NameDT214536
Unique NameDT214536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214536 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.332e-19
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = -1
Query:  159 FRSLMASGISVYIYSGDTDGTVPTISIRYSINKLGAKVKTAWYPCYIQGEXXXXXXXYQNLTFVTIRGAGHMVPSSQPARALAFFSSFLDG 431
            ++ L+A+G+ +++YSGDTD  +P  + RYS+ KL  +VKT WYP Y   +       Y+ LTFVT+RGAGH VP  QP  AL    SFL G
Sbjct:  367 YKELIAAGLRIWVYSGDTDSVIPVTATRYSLGKLNLRVKTRWYPWYSGNQVGGRTEVYEGLTFVTVRGAGHEVPFFQPQSALILLRSFLAG 457          

HSP 2 Score: 21.9422 bits (45), Expect = 1.332e-19
Identity = 10/28 (35.71%), Postives = 17/28 (60.71%), Query Frame = -3
Query:  421 WQDCSDAVLR--HWKDSPLTVVGGIQEL 498
            W  CSD+V    +W+DS  +++   +EL
Sbjct:  343 WTACSDSVFNNWNWRDSDNSMLPIYKEL 370          
BLAST of DT214536 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.254e-19
Identity = 38/95 (40.00%), Postives = 56/95 (58.95%), Query Frame = -1
Query:  147 FRSLMASGISVYIYSGDTDGTVPTISIRYSINKLGAKVKTAWYPCYIQGEXXXXXXXYQNLTFVTIRGAGHMVPSSQPARALAFFSSFLDGKLPP 431
            ++ L+ +G+ ++++SGDTD  VP  + RYS++ L     T WYP Y  G+       Y+ LT VT+ GAGH VP  +P +A   F SFL+ K  P
Sbjct:  363 YKELITAGLKIWVFSGDTDAVVPITATRYSVDALKLATITNWYPWYDHGKVGGWSQVYKGLTLVTVAGAGHEVPLHRPRQAFILFRSFLESKPMP 457          

HSP 2 Score: 32.7278 bits (73), Expect = 2.254e-19
Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = -3
Query:  421 PWQDCSDAVLRHWKDSPLTVVGGIQEL 501
            PW+ CSD V  +W DSPL+++   +EL
Sbjct:  340 PWKACSDIVGSYWDDSPLSMLPIYKEL 366          
BLAST of DT214536 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.442e-19
Identity = 42/97 (43.30%), Postives = 57/97 (58.76%), Query Frame = -1
Query:  141 FRSLMASGISVYIYSGDTDGTVPTISIRYSINKLGAKVKTAWYPCYIQGEXXXXXXXYQNLTFVTIRGAGHMVPSSQPARALAFFSSFLDGKLPPAA 431
            +R ++A GI V+++SGD D  VP  + RYS+ +L    K  WYP Y++ +       Y+ LTFVT+RGAGH VP  +P  A   F  FL GK  P A
Sbjct:  377 YREMIAGGIRVWVFSGDVDSVVPVTATRYSLARLSLSTKLPWYPWYVKKQVGGWTEVYEGLTFVTVRGAGHEVPLFKPRAAFELFKYFLRGKPLPKA 473          

HSP 2 Score: 25.0238 bits (53), Expect = 6.442e-19
Identity = 9/26 (34.62%), Postives = 16/26 (61.54%), Query Frame = -3
Query:  421 WQDCSDAVLRHWKDSPLTVVGGIQEL 498
            W  CS+ + R+W D+  TV+   +E+
Sbjct:  355 WTACSEVLNRNWNDTDSTVLPIYREM 380          
BLAST of DT214536 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.448e-19
Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = -1
Query:  147 FRSLMASGISVYIYSGDTDGTVPTISIRYSINKLGAKVKTAWYPCYIQGEXXXXXXXYQNLTFVTIRGAGHMVPSSQPARALAFFSSFLDGKLPP 431
            ++ L A+G+ ++++SGDTD  VP    R +++KL   VKT WYP Y + +       Y+ LTF TIRGAGH VP  QP RAL    SFL GK  P
Sbjct:  357 YKELTAAGLRIWVFSGDTDAVVPVTGTRLALSKLNLPVKTPWYPWYSEKQVGGWTEVYEGLTFATIRGAGHEVPVLQPERALTLLRSFLAGKELP 451          

HSP 2 Score: 22.3274 bits (46), Expect = 6.448e-19
Identity = 9/26 (34.62%), Postives = 15/26 (57.69%), Query Frame = -3
Query:  421 WQDCSDAVLRHWKDSPLTVVGGIQEL 498
            W  C+  V  +WKDS  +++   +EL
Sbjct:  335 WTLCNMVVNNNWKDSEFSMLPIYKEL 360          
BLAST of DT214536 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.256e-18
Identity = 46/107 (42.99%), Postives = 58/107 (54.21%), Query Frame = -1
Query:  123 RSLMASGISVYIYSGDTDGTVPTISIRYSINKLGAKVKTAWYPCY--IQGEXXXXXXXYQ---NLTFVTIRGAGHMVPSSQPARALAFFSSFLDGKLPPAAKS*RMD 428
            + LM + I V++YSGDTDG VP  S R S+N+L   V   W P +   +G         Q   +L+ VT+RGAGH VPS QP RAL    +FL GK  P  K    D
Sbjct:  410 QELMKNSIRVWVYSGDTDGRVPVTSSRLSVNQLQLPVAAKWRPWFSSTKGAGEVGGYIVQYKGDLSLVTVRGAGHEVPSYQPRRALVLVQNFLAGKALPDCKECEQD 516          

HSP 2 Score: 30.8018 bits (68), Expect = 5.256e-18
Identity = 16/27 (59.26%), Postives = 17/27 (62.96%), Query Frame = -3
Query:  421 PWQDCSDAVLRHWKDSPLTVVGGIQEL 501
            PW  CSD VL  W DS  TV+  IQEL
Sbjct:  387 PWSACSD-VLTRWVDSAKTVLPIIQEL 412          
BLAST of DT214536 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.955e-17
Identity = 41/98 (41.84%), Postives = 59/98 (60.20%), Query Frame = -1
Query:  138 RSLMASGISVYIYSGDTDGTVPTISIRYSINKLGAKVKTAWYPCYIQGEXXXXXXXYQ-NLTFVTIRGAGHMVPSSQPARALAFFSSFLDGKLPPAAK 428
            + L+  G+ ++IYSGDTDG VP  S RYSI K+G KV++ W   + + +       Y   L FVT+RGAGH VP+  PA++L  FS F+     P+ +
Sbjct:  382 QKLLTGGLRIWIYSGDTDGRVPVTSTRYSIKKMGLKVESPWRSWFHKSQVAGWVETYAGGLNFVTVRGAGHQVPALAPAQSLTLFSHFISSVPLPSKR 479          

HSP 2 Score: 26.5646 bits (57), Expect = 1.955e-17
Identity = 11/27 (40.74%), Postives = 18/27 (66.67%), Query Frame = -3
Query:  421 PWQDCSDAVLRHWKDSPLTVVGGIQEL 501
            P+  CS  V++ W D+P T++  IQ+L
Sbjct:  359 PYSPCS-GVIKRWSDAPSTMIPIIQKL 384          
BLAST of DT214536 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 3.564e-16
Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = -1
Query:  147 RSLMASGISVYIYSGDTDGTVPTISIRYSINKLGAKVKTAWYPCYIQGEXXXXXXXYQNLTFVTIRGAGHMVPSSQPARALAFFSSFLDGKLPP 428
            R+L+++G+ V+++SGDTDG +P  + RYS+ KLG K+   W P Y + +       Y  L FVT+RGAGH VP+ +P  AL     FL  K  P
Sbjct:  402 RTLVSAGLRVWVFSGDTDGRIPVTATRYSLKKLGLKIVQDWTPWYTKLQVGGWTVEYDGLMFVTVRGAGHQVPTFKPREALQLIHHFLGNKKLP 495          
BLAST of DT214536 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.655e-16
Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = -1
Query:  141 FRSLMASGISVYIYSGDTDGTVPTISIRYSINKLGAKVKTAWYPCYIQGEXXXXXXXYQN-LTFVTIRGAGHMVPSSQPARALAFFSSFLDGKLPPAA 431
            +  L+ +G+ +++YSGD DG VP I  RY +  LG  VK+ W   +   +       Y+  LTFVT+RGAGH+VP ++P  ALA F SFL+G+  P++
Sbjct:  374 YSKLIKAGLKIWVYSGDADGRVPVIGSRYCVEALGISVKSEWRSWFHNHQVGGRITEYEGGLTFVTVRGAGHLVPLNKPEEALALFRSFLNGQELPSS 471          
BLAST of DT214536 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.001e-15
Identity = 41/104 (39.42%), Postives = 56/104 (53.85%), Query Frame = -1
Query:  123 FRSLMASGISVYIYSGDTDGTVPTISIRYSINKLGAKVKTAWYPCYIQ-GEXXXXXXXYQNLTFVTIRGAGHMVPSSQPARALAFFSSFLDGKLPPAAKS*RMD 431
            +  L+  G+ ++++SGDTD  +P  S RYSI+ L     T W+  Y   GE       Y+ L FVT+RGAGH VP  +P +AL    SFL G+  P     R D
Sbjct:  332 YHELIQYGLRIWMFSGDTDAVIPVTSTRYSIDALKLPTVTPWHAWYDDDGEVGGWTQGYKGLNFVTVRGAGHEVPLHRPKQALTLIKSFLAGRPMPVLSDLRSD 435          

HSP 2 Score: 25.409 bits (54), Expect = 1.001e-15
Identity = 9/29 (31.03%), Postives = 16/29 (55.17%), Query Frame = -3
Query:  421 RGPWQDCSDAVLRHWKDSPLTVVGGIQEL 507
            +  W+ CS+ +  +WKD   +V+    EL
Sbjct:  307 KSKWETCSEVINTNWKDCERSVLHIYHEL 335          
BLAST of DT214536 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.037e-15
Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = -1
Query:  144 FRSLMASGISVYIYSGDTDGTVPTISIRYSINKLGAKVKTAWYPCYI---QGEXXXXXXXYQNLTFVTIRGAGHMVPSSQPARALAFFSSFLDGKLPPA 431
            +R L+ +G+ V++YSGDTD  VP  S R S+  L   VKT+WYP Y+   + E       Y+ LT+V+  GAGH+VP  +PA+A   F  FL G+  PA
Sbjct:  396 YRELIQAGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVSPSGAGHLVPVHRPAQAFLLFKQFLKGEPMPA 494          
The following BLAST results are available for this feature:
BLAST of DT214536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
SCP22_ARATH1.332e-1947.25Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP27_ARATH2.254e-1940.00Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
SCP25_ARATH6.442e-1943.30Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP23_ARATH6.448e-1946.32Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
CBP23_HORVU5.256e-1842.99Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
SCP35_ARATH1.955e-1741.84Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP34_ARATH3.564e-1642.55Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
SCP33_ARATH4.655e-1641.84Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
CBP22_HORVU1.001e-1539.42Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
HNLS_SORBI1.037e-1543.43P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_16E08_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-16E08-I15-1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214536 ID=DT214536; Name=DT214536; organism=Citrus sinensis; type=EST; length=518bp
TTTTACTTTCTTTTTGCTATTAAACATTGTCTGCTTTTGGTGATAATGTC
TAGCCGTTGACTAATGAACTAGGACAAAAGTTTAATAGTTTTGATTCAAA
CTAATTGCAATGATTCAATCTTATCCATTCTCTAGCTTTTTGCTGCGGGT
GGAAGCTTTCCATCTAAGAAGGATGAGAAGAAGGCAAGAGCCCGAGCAGG
TTGAGAACTTGGAACCATGTGTCCAGCACCTCTTATAGTCACAAATGTTA
GGTTCTGGTATCCCACAACATAACCACCAACCTCTCCTTGAATGTAACAA
GGGTACCAAGCTGTCTTTACTTTTGCTCCAAGTTTGTTTATTGAGTACCT
TATCGAAATCGTTGGCACCGTGCCATCAGTGTCTCCACTATAGATGTATA
CACTTATCCCGCTGGCCATTAAGCTCCTGAATGCCCCCCACGACTGTCAA
TGGACTGTCTTTCCAATGACGCAACACAGCGTCGCTGCAATCCTGCCATG
GACCTCGAATCCCCAGTA
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