DT214535

Overview
NameDT214535
Unique NameDT214535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length369
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5318 contig Csv1_Contig5318:336..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.285e-25
Identity = 53/97 (54.64%), Postives = 67/97 (69.07%), Query Frame = -1
Query:   76 KALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIKF 366
            +A++ QPVSV I+A  + FQHY  GIF G CGT  +HAV AVGYGS +    VDY IV+NSWG +WGE GYIR++RN     G C I   AS+P+K+
Sbjct:  224 RAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTNMDHAVVAVGYGSEN---GVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGIAIEASYPVKY 317          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.285e-25
Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = -1
Query:   79 KALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 366
            KA+ANQPVSV ++A+ +DFQ Y  GIF GSC    NHA+T VGYG+ +     D+ IVKNSWG  WGE GYIR +RN   P G C I + AS+P+K
Sbjct:  125 KAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYGTENDK---DFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.538e-24
Identity = 55/97 (56.70%), Postives = 66/97 (68.04%), Query Frame = -1
Query:   79 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 369
            LKA+ANQPVSV I+A   DFQ YS G+F GSCGT  +H V  VGYG++   +   Y  VKNSWGP+WGE GYIR++R      GLC I   AS+PIK
Sbjct:  249 LKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTI--DGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 343          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.426e-24
Identity = 51/97 (52.58%), Postives = 67/97 (69.07%), Query Frame = -1
Query:   79 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 369
            ++A+ANQPVSV  ++  + FQ Y GGI++G CGT  +HAVTAVGYG +       Y+++KNSWGP WGE GYIRIKR +G   G C +   + FPIK
Sbjct:  122 IQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDHAVTAVGYGKT-------YLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.474e-24
Identity = 53/97 (54.64%), Postives = 65/97 (67.01%), Query Frame = -1
Query:   79 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 369
            L A+A QPVSV +E+  + FQ Y GGIF+G CGT  +HAVTAVGYG S       YI++KNSWG  WGE GYIRIKR  G   G+C + K + +P K
Sbjct:  254 LNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKSGGK---GYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 347          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.631e-24
Identity = 53/97 (54.64%), Postives = 66/97 (68.04%), Query Frame = -1
Query:   79 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 369
            L ++ANQPVSV +EA+ KDFQ Y GGIF G CG   +HAV AVGYG        +YI++KNSWG  WGE GYIRIKR TG   G+C +   + +P+K
Sbjct:  255 LYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP-------NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 344          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.302e-23
Identity = 51/96 (53.12%), Postives = 66/96 (68.75%), Query Frame = -1
Query:   79 KALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 366
            KA+A+QPVSV I+A  ++FQ Y  G+F G CGT  +H V AVGYG+ ++  A  Y  V+NSWGP WGE GYIR++RN     G C I  +AS+PIK
Sbjct:  281 KAVAHQPVSVAIDAGGREFQLYDSGVFTGRCGTNLDHGVVAVGYGTDAATGAA-YWTVRNSWGPDWGENGYIRMERNVTARTGKCGIAMMASYPIK 375          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.900e-23
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = -1
Query:   79 KALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 366
            KA+A+QP+S+ IEA  + FQ Y  GIFDGSCGT  +H V AVGYG+ +     DY IV+NSWG  WGE GY+R+ RN     G C I    S+PIK
Sbjct:  261 KAVAHQPISIAIEAGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGK---DYWIVRNSWGKSWGESGYLRMARNIASSSGKCGIAIEPSYPIK 353          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.900e-23
Identity = 52/96 (54.17%), Postives = 63/96 (65.62%), Query Frame = -1
Query:   79 KALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 366
            KA+ANQPVSV IEA  + FQ YS GIF G CGT  +H V AVGYG+ +     DY IV+NSWG  WGE GY+R++RN     G C I    S+P+K
Sbjct:  253 KAVANQPVSVAIEAGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGK---DYWIVRNSWGKSWGESGYVRMERNIKASSGKCGIAVEPSYPLK 345          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.460e-23
Identity = 51/95 (53.68%), Postives = 62/95 (65.26%), Query Frame = -1
Query:   79 ALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 363
            A+A+QPVSV +EA+   FQHYS GIF G CGT  NH V  VGYG+ S     +Y IV+NSWG  WG  GYI ++RN     GLC I +L S+P K
Sbjct:  123 AVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNHGVVIVGYGTQSGK---NYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214          
The following BLAST results are available for this feature:
BLAST of DT214535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CYSP4_BRANA5.285e-2554.64Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CPGP2_ZINOF5.285e-2555.21Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CYSEP_RICCO1.538e-2456.70Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
MEX1_JACME3.426e-2452.58Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
PAPA3_CARPA4.474e-2454.64Caricain OS=Carica papaya PE=1 SV=2[more]
PAPA1_CARPA7.631e-2454.64Papain OS=Carica papaya PE=1 SV=1[more]
CYSP1_ORYSJ1.302e-2353.13Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
RD21A_ARATH2.900e-2353.13Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ2.900e-2354.17Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
ERVB_TABDI6.460e-2353.68Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13B10_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-13B10-C20-1-6.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214535 ID=DT214535; Name=DT214535; organism=Citrus sinensis; type=EST; length=369bp
CATTCATTGAANGCACAAGATATTATTTTTAGTCATAACTGAAGGCAAAC
ATACTATACACAGTTAAGTGGTCTTGAACTTGATGGGGAATGAAGCCAAC
TTGTTGATAGCACATAGGCCACCAGGTAATCCGGTGTTTCTCTTAATCCT
GATGTAGCCTCCCTCTCCCCATTTGGGTCCCCATGAATTTTTGACAATTA
TGTAATCCACTGCCTCCGGTGAAGAAGAAGATCCATACCCAACTGCTGTC
ACTGCGTGATTGGGATATGTTCCACAGGAGCCGTCGAATATACCCCCGCT
GTAATGTTGGAAATCCTTGCTAGAAGCCTCAATGCCGACGCTAACGGGCT
GGTTCGCCAGTGCTTTCAA
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