DT214535

Overview
NameDT214535
Unique NameDT214535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length369
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5318 contig Csv1_Contig5318:336..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.759e-20
Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = -1
Query:   79 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYP---NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 369
            L A+  QP+SV I+A  KDF  Y+GGI+DG   T P   NH V  VGYGS+   + VDY I KNSWG  WGE GYI I+RNTG   G+C +N  AS+P K
Sbjct:  263 LSAILEQPISVSIDA--KDFHLYTGGIYDGENCTSPYGINHFVLLVGYGSA---DGVDYWIAKNSWGFDWGEDGYIWIQRNTGNLLGVCGMNYFASYPTK 357          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.945e-19
Identity = 48/96 (50.00%), Postives = 57/96 (59.38%), Query Frame = -1
Query:   79 KALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 366
            KA+ANQPVSV ++A+ +DFQ Y  GIF GSC    NH  T    G   +    DY  VKNSWG  WGE GYIR++RN     G C I    S+PIK
Sbjct:  125 KAVANQPVSVTMDAAGRDFQLYRNGIFTGSCNISANHYRTV---GGRETENDKDYWTVKNSWGKNWGESGYIRVERNIAESSGKCGIAISPSYPIK 217          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 4.333e-19
Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = -1
Query:  106 ALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAI 363
            A++NQP++  ++AS  +FQHY  G+F G CGT  NHA+  +GYG  SS +   + IV+NSWG  WGEGGYIR+ R+     GLC I
Sbjct:  245 AVSNQPIAAALDASG-NFQHYKRGVFTGPCGTRLNHAIVIIGYGQDSSGK--KFWIVRNSWGAGWGEGGYIRLARDVSSSFGLCGI 327          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.261e-18
Identity = 50/96 (52.08%), Postives = 59/96 (61.46%), Query Frame = -1
Query:   79 KALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 366
            +A+A QP +V I+ASS  FQ YS GIF G CGT  NH VT VGY         +Y IV+NSWG  WGE GYIR+ R  G   GLC I +L  +P K
Sbjct:  121 QAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNHGVTIVGY-------QANYWIVRNSWGRYWGEKGYIRMLRVGGC--GLCGIARLPYYPTK 207          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.172e-18
Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = -1
Query:   79 KALANQPVSVGIEASSKDFQHYSGGIFDGSCGT-YPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 366
            KA+A QP+SV I A++     Y  G++ G+C   + +H V  VGYG+SS  +  DY +++NSWGP+WGEGGY+R++RN   P G CA+     +PIK
Sbjct:  255 KAVAYQPISVMISAAN--MSDYKSGVYKGACSNLWGDHNVLIVGYGTSS--DEGDYWLIRNSWGPEWGEGGYLRLQRNFHEPTGKCAVAVAPVYPIK 347          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.821e-17
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = -1
Query:  106 ALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAI 363
            A++ QP++V ++A++ +FQ+Y  G+F+G CGT  NHAVTA+GYG        D II    WG KWGE GYIR+ R+     G+C I
Sbjct:  124 AVSKQPITVAVDANA-NFQYYKSGVFNGPCGTSLNHAVTAIGYGQ-------DSIIYPKKWGAKWGEAGYIRMARDVSSSSGICGI 201          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.541e-16
Identity = 46/117 (39.32%), Postives = 56/117 (47.86%), Query Frame = -1
Query:   82 PVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYG----------------------------SSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 348
            PV++ + AS +DF  YSGG+FDG C    NH+V  VGYG                                 + + Y IV+NSWGP WGEGGYIRIKRN     G C +     FPI
Sbjct:  390 PVTIAVGAS-EDFVLYSGGVFDGECNPELNHSVLLVGYGQVKKSLAFEDSHSNVDSNLIKKYKENIKGDDDDDIIYYWIVRNSWGPNWGEGGYIRIKRNKAGDDGFCGVGSDVFFPI 505          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.013e-16
Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = -1
Query:   82 PVSVGIEASSKDFQHYSGGIF-DGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 348
            PV VGI  S + F+ Y  G++ +G+CG  P+HAV AVGYG+   P   DY IVKNSWG  WG+ GY+ + RN    G +C I   ASFPI
Sbjct:  312 PVVVGISGSKRSFRFYKDGVYSEGNCGR-PDHAVLAVGYGTH--PSYGDYWIVKNSWGTDWGKDGYVYMARNR---GNMCHIASAASFPI 395          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.443e-14
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = -1
Query:   82 PVSVGIEASSKDFQHYSGGIF-DGSCGT-YPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 348
            PVSV I+A    F  Y GG++ + +C + Y NHAVTAVGYG+ ++    DY IVKNSWG  WGE GYI++ RN       CAI   + +P+
Sbjct:  237 PVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDAN--GGDYWIVKNSWGAWWGESGYIKMARNR---DNNCAIATYSVYPV 322          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.159e-14
Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = -1
Query:   82 ALANQPVSVGIEASSKDFQHYSGGIF-DGSCGTYP-NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 363
            AL   PVSV I+AS   FQ Y+ G++ + +C +   +H V AVG G+ +     DY IVKNSWGP WG  GYI + RN       C I+ +AS+PI
Sbjct:  247 ALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGTDNGE---DYYIVKNSWGPSWGLNGYIHMARN---KDNNCGISTMASYPI 336          
The following BLAST results are available for this feature:
BLAST of DT214535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
P34_SOYBN1.759e-2054.00P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CPGP1_ZINOF1.945e-1950.00Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
ANAN_ANACO4.333e-1950.00Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
ERVC_TABDI1.261e-1852.08Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CPR2_ARATH8.172e-1845.36Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
BROM2_ANACO1.821e-1746.51Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP_PLAVN1.541e-1639.32Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
CATL_BRUPA2.013e-1650.00Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CRUST_PANBO1.443e-1447.25Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSP3_DICDI7.159e-1444.79Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13B10_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-13B10-C20-1-6.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214535 ID=DT214535; Name=DT214535; organism=Citrus sinensis; type=EST; length=369bp
CATTCATTGAANGCACAAGATATTATTTTTAGTCATAACTGAAGGCAAAC
ATACTATACACAGTTAAGTGGTCTTGAACTTGATGGGGAATGAAGCCAAC
TTGTTGATAGCACATAGGCCACCAGGTAATCCGGTGTTTCTCTTAATCCT
GATGTAGCCTCCCTCTCCCCATTTGGGTCCCCATGAATTTTTGACAATTA
TGTAATCCACTGCCTCCGGTGAAGAAGAAGATCCATACCCAACTGCTGTC
ACTGCGTGATTGGGATATGTTCCACAGGAGCCGTCGAATATACCCCCGCT
GTAATGTTGGAAATCCTTGCTAGAAGCCTCAATGCCGACGCTAACGGGCT
GGTTCGCCAGTGCTTTCAA
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