DT214535

Overview
NameDT214535
Unique NameDT214535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length369
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5318 contig Csv1_Contig5318:336..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.159e-14
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = -1
Query:   82 PVSVGIEASSKDFQHYSGGIF-DGSCG-TYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 348
            P+SV I+A+   FQ YS G++ + SC  +Y +HAV AVGYGS       D+ +VKNSW   WG+ GYI++ RN       C I  +AS+P+
Sbjct:  238 PISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQ---DFWLVKNSWATSWGDAGYIKMSRNR---NNNCGIATVASYPL 322          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.350e-14
Identity = 44/94 (46.81%), Postives = 54/94 (57.45%), Query Frame = -1
Query:   82 ANQPVSVGIEASSKDFQHYSGGIFDG-SCGTYP-NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 357
            A +P +V ++  S DF  Y  GI+   +C     NHAV AVGYG+       DY IVKNSWG  WGE GYIR+ RN    G +C I  LAS P+
Sbjct:  235 ARRPAAVAVDVES-DFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQGG---TDYWIVKNSWGTYWGERGYIRMARNR---GNMCGIASLASLPM 321          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.083e-13
Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = -1
Query:   85 PVSVGIEASSKDFQHYSGGIF-DGSCG-TYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 348
            P+SV I+AS   FQ YS G++ + +C  T+ +H V AVGYG+ S+    DY +VKNSWG  WG+ GYI++ RN       C I    S+P
Sbjct:  236 PISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTK---DYWLVKNSWGSSWGDAGYIKMSRNR---DNNCGIASEPSYP 319          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.083e-13
Identity = 43/90 (47.78%), Postives = 53/90 (58.89%), Query Frame = -1
Query:   85 PVSVGIEASSKDFQHYSGGIF-DGSCGTYP-NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 348
            PVSVGI+AS   FQ YS G++ D  C     NHAV AVGYG+    +   + I+KNSWG +WG  GY+ + RN       C I  LASFP
Sbjct:  249 PVSVGIDASLPSFQFYSRGVYYDTGCNPENINHAVLAVGYGAQKGTK---HWIIKNSWGTEWGNKGYVLLARNM---KQTCGIANLASFP 332          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.721e-13
Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = -1
Query:   85 KALANQ-PVSVGIEASSKDFQHYSGGIF-DGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 366
            +A+AN+ PVSVGI+AS   F  Y  G++ D SC    NH V  VGYG+    +  DY +VKNSWG  +G+ GYIR+ RN+   G  C I    S+P
Sbjct:  240 EAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNL---DGKDYWLVKNSWGLHFGDQGYIRMARNS---GNHCGIANYPSYP 329          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.721e-13
Identity = 42/90 (46.67%), Postives = 51/90 (56.67%), Query Frame = -1
Query:   85 PVSVGIEASSKDFQHYSGGIF-DGSCGT-YPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 348
            PVSV I+AS   FQ YS G++ D +C     NHAV  VGYG+    +   Y I+KNSWG  WG  GY+ + RN       C I  LASFP
Sbjct:  244 PVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNK---YWIIKNSWGESWGNKGYVLLARN---KNNACGITNLASFP 327          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.553e-13
Identity = 44/90 (48.89%), Postives = 52/90 (57.78%), Query Frame = -1
Query:   85 PVSVGIEASSKDFQHYSGGIF-DGSCGTYP-NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 348
            PVSV I+AS   FQ YS G++ D SC +   NHAV AVGYG     +   + I+KNSWG  WG  GYI + RN       C I  LASFP
Sbjct:  244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNK---HWIIKNSWGENWGNKGYILMARN---KNNACGIANLASFP 327          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.553e-13
Identity = 44/90 (48.89%), Postives = 52/90 (57.78%), Query Frame = -1
Query:   85 PVSVGIEASSKDFQHYSGGIF-DGSCGTYP-NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 348
            PVSV I+AS   FQ YS G++ D SC +   NHAV AVGYG     +   + I+KNSWG  WG  GYI + RN       C I  LASFP
Sbjct:  244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNK---HWIIKNSWGENWGNKGYILMARN---KNNACGIANLASFP 327          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.553e-13
Identity = 44/90 (48.89%), Postives = 52/90 (57.78%), Query Frame = -1
Query:   85 PVSVGIEASSKDFQHYSGGIF-DGSCGTYP-NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 348
            PVSV I+AS   FQ YS G++ D SC +   NHAV AVGYG     +   + I+KNSWG  WG  GYI + RN       C I  LASFP
Sbjct:  244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNK---HWIIKNSWGENWGNKGYILMARN---KNNACGIANLASFP 327          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.641e-13
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = -1
Query:   85 PVSVGIEASSKDFQHYSGGIF-DGSCGTY-PNHAVTAVGYGSSSS-PEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 348
            PVS  I+AS   F+ Y+GGI+ + +C +Y  NHAV  VGYGS     +  +Y ++KNSWG +WG  GY++I ++       C I  LAS+P
Sbjct:  244 PVSAAIDASHDSFRFYNGGIYYEPNCSSYFVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQIAKD---HNNHCGIASLASYP 331          
The following BLAST results are available for this feature:
BLAST of DT214535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CYSP2_HOMAM7.159e-1443.96Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATLL_FASHE9.350e-1446.81Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CYSP3_HOMAM2.083e-1344.44Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATK_CHICK2.083e-1347.78Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CATS_BOVIN2.721e-1345.83Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATK_RAT2.721e-1346.67Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_MACMU3.553e-1348.89Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA3.553e-1348.89Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN3.553e-1348.89Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATJ_MOUSE4.641e-1342.86Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13B10_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-13B10-C20-1-6.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214535 ID=DT214535; Name=DT214535; organism=Citrus sinensis; type=EST; length=369bp
CATTCATTGAANGCACAAGATATTATTTTTAGTCATAACTGAAGGCAAAC
ATACTATACACAGTTAAGTGGTCTTGAACTTGATGGGGAATGAAGCCAAC
TTGTTGATAGCACATAGGCCACCAGGTAATCCGGTGTTTCTCTTAATCCT
GATGTAGCCTCCCTCTCCCCATTTGGGTCCCCATGAATTTTTGACAATTA
TGTAATCCACTGCCTCCGGTGAAGAAGAAGATCCATACCCAACTGCTGTC
ACTGCGTGATTGGGATATGTTCCACAGGAGCCGTCGAATATACCCCCGCT
GTAATGTTGGAAATCCTTGCTAGAAGCCTCAATGCCGACGCTAACGGGCT
GGTTCGCCAGTGCTTTCAA
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