DT214535

Overview
NameDT214535
Unique NameDT214535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length369
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5318 contig Csv1_Contig5318:336..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12
Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = -1
Query:   73 NQPVSVGIEASSKDFQHYSGGIF--DGSCGT-YPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIKFK 354
            N PV+VG++AS   FQ Y  G    D  C +   NH VTAVGYGS+S+ +   Y I++NSWG  WG+ GY  + R++     +C I + +++P   K
Sbjct:  216 NGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMMNHCVTAVGYGSNSNGK---YWIIRNSWGTSWGDAGYFLLARDS---NNMCGIGRDSNYPTGVK 306          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = -1
Query:   85 KALANQ-PVSVGIEASSKDFQHYSGGIF-DGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 366
            +A+AN+ PVSV I+AS   F  Y  G++ + SC    NH V  VGYG+ +     DY +VKNSWG  +G+ GYIR+ RN+   G  C I    S+P
Sbjct:  240 EAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGNLNGK---DYWLVKNSWGLNFGDQGYIRMARNS---GNHCGIASYPSYP 329          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12
Identity = 41/90 (45.56%), Postives = 51/90 (56.67%), Query Frame = -1
Query:   85 PVSVGIEASSKDFQHYSGGIF-DGSCGTYP-NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 348
            P+SV I+AS   FQ Y  G++ D +C +   NHAV AVGYG     +   + I+KNSWG  WG  GYI + RN       C I  LASFP
Sbjct:  244 PISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNK---HWIIKNSWGENWGNKGYILMARN---KNNACGIANLASFP 327          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.131e-12
Identity = 39/98 (39.80%), Postives = 55/98 (56.12%), Query Frame = -1
Query:   85 LKALANQ-PVSVGIEASSKDFQHYSGGI-FDGSCGTYP-NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 369
            +KA+A   P+SV I+A  + FQ Y  GI FD  C +   +H V  VGYG   +     + IVKNSWGP+WG  GY+++ ++       C I   AS+P
Sbjct:  237 MKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKD---QNNHCGIATAASYP 331          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.131e-12
Identity = 39/90 (43.33%), Postives = 50/90 (55.56%), Query Frame = -1
Query:   85 PVSVGIEASSKDFQHYSGGIF-DGSCGT-YPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 348
            P+SV I+AS   FQ YS G++ D +C     NHAV  VGYG+    +   + I+KNSWG  WG  GY  + RN       C I  +ASFP
Sbjct:  244 PISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGSK---HWIIKNSWGESWGNKGYALLARN---KNNACGITNMASFP 327          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.701e-12
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = -1
Query:   85 PVSVGIEASSKDFQ-HYSGGIFDGSCGTYP-NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 348
            P+SV I+AS + FQ +Y+G  ++ SC +   +HAV AVGYGS       D+ +VKNSW   WGE GYI++ RN       C I   A +P
Sbjct:  237 PISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEGGQ---DFWLVKNSWATSWGESGYIKMARNR---NNNCGIATDACYP 320          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12
Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = -1
Query:   82 LKALANQ-PVSVGIEASSKDFQHYSGGIF-DGSCG-TYPNHAVTAVGYG-SSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 369
            +KA+A   P+SV ++AS   FQ Y  GI+ +  C   + NHAV  VGYG      +   Y +VKNSWG +WG  GYI+I ++       C I  LA++PI
Sbjct:  236 MKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKDW---NNHCGIATLATYPI 332          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = -1
Query:   82 PVSVGIEASSKDFQHYSGGIF-DGSCGTYP-NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 348
            PVSV I+AS + FQ YS G++ +  C     +H V  VG+G+  S E  DY +VKNSWG  WG+ G+I++ RN       C I   +S+P+
Sbjct:  285 PVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGE--DYWLVKNSWGTTWGDKGFIKMLRN---KENQCGIASASSYPL 370          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11
Identity = 42/95 (44.21%), Postives = 51/95 (53.68%), Query Frame = -1
Query:   82 NQPVSVGIEASSKDFQHYSGGIFDG-SCGTYP---NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 354
            + PVS   E ++ DF  Y  GI+   SC   P   NHAV AVGYG     + + Y IVKNSWGP WG  GY  I+R       +C +   ASFPI
Sbjct:  246 HNPVSFAFEVTA-DFMMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEE---KGIPYWIVKNSWGPNWGMKGYFLIERGK----NMCGLAACASFPI 332          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11
Identity = 42/99 (42.42%), Postives = 54/99 (54.55%), Query Frame = -1
Query:   94 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYP-------NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLA 369
            L+ + + P++V  E    DF HY  GI+  +    P       NHAV  VGYG+ S+   +DY IVKNSWG  WGE GY RI+R T      CAI  +A
Sbjct:  362 LELVYHGPLAVAFEVYD-DFLHYQNGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSA-SGMDYWIVKNSWGTSWGEDGYFRIRRGT----DECAIESIA 454          
The following BLAST results are available for this feature:
BLAST of DT214535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
ACP1_ENTHI3.008e-1240.21Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CATS_CANFA3.928e-1243.75Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATK_BOVIN3.928e-1245.56Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATL1_CANFA5.131e-1239.80Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATK_MOUSE5.131e-1243.33Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CYSP1_HOMAM6.701e-1243.33Digestive cysteine proteinase 1 OS=Homarus america... [more]
TEST2_MOUSE8.752e-1241.00Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATL_DROME8.752e-1241.76Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATH_BOVIN1.143e-1144.21Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CATC_MACFA1.143e-1142.42Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13B10_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-13B10-C20-1-6.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214535 ID=DT214535; Name=DT214535; organism=Citrus sinensis; type=EST; length=369bp
CATTCATTGAANGCACAAGATATTATTTTTAGTCATAACTGAAGGCAAAC
ATACTATACACAGTTAAGTGGTCTTGAACTTGATGGGGAATGAAGCCAAC
TTGTTGATAGCACATAGGCCACCAGGTAATCCGGTGTTTCTCTTAATCCT
GATGTAGCCTCCCTCTCCCCATTTGGGTCCCCATGAATTTTTGACAATTA
TGTAATCCACTGCCTCCGGTGAAGAAGAAGATCCATACCCAACTGCTGTC
ACTGCGTGATTGGGATATGTTCCACAGGAGCCGTCGAATATACCCCCGCT
GTAATGTTGGAAATCCTTGCTAGAAGCCTCAATGCCGACGCTAACGGGCT
GGTTCGCCAGTGCTTTCAA
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