DT214535

Overview
NameDT214535
Unique NameDT214535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length369
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5318 contig Csv1_Contig5318:336..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11
Identity = 41/93 (44.09%), Postives = 51/93 (54.84%), Query Frame = -1
Query:   82 PVSVGIEASSKDFQHYSGGIFDG-SCGTYP---NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 348
            PVS   E + +DF  Y  GI+   SC   P   NHAV AVGYG  +    + Y IVKNSWGP+WG  GY  I+R       +C +   AS+PI
Sbjct:  248 PVSFAFEVT-QDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNG---IPYWIVKNSWGPQWGMNGYFLIERGK----NMCGLAACASYPI 332          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11
Identity = 42/99 (42.42%), Postives = 55/99 (55.56%), Query Frame = -1
Query:   94 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYP-------NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLA 369
            L+ + + P++V  E    DF HY  GI+  +    P       NHAV  VGYG+ S+   +DY IVKNSWG +WGE GY RI+R T      CAI  +A
Sbjct:  334 LELVRHGPMAVAFEVYD-DFFHYQKGIYYHTGLRDPFNPFELTNHAVLLVGYGTDSA-SGMDYWIVKNSWGSRWGEDGYFRIRRGT----DECAIESIA 426          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.546e-11
Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = -1
Query:   91 LANQPVSVGIEASSKDFQHYSGGI---FDGSCGTYP-NHAVTAVGYGSSSSP---EAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLAS 360
            LAN P+S+GI A++  F  Y GG+   +   C     +H V  VGYG S  P   + + Y IVKNSWGP+WGE GY R+ R        C ++++A+
Sbjct:  519 LANGPISIGINANAMQF--YRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRG----DNTCGVSEMAT 609          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.546e-11
Identity = 36/81 (44.44%), Postives = 47/81 (58.02%), Query Frame = -1
Query:   82 KDFQHYSGGIFDGSC--GTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 318
            K  + Y GGIFD S   G   +H V  VGYG  +  +   Y I+KN+WG  WGE GYIR+ R+T      C + K+AS+PI
Sbjct:  248 KPMKSYGGGIFDDSSCLGDNLHHGVNVVGYGIENGQK---YWIIKNTWGADWGESGYIRLIRDT---DHSCGVEKMASYPI 322          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.546e-11
Identity = 41/93 (44.09%), Postives = 51/93 (54.84%), Query Frame = -1
Query:   82 PVSVGIEASSKDFQHYSGGIFDG-SCGTYP---NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 348
            PVS   E ++ DF  Y  GI+   SC   P   NHAV AVGYG  +    + Y IVKNSWGP+WG  GY  I+R       +C +   AS+PI
Sbjct:  248 PVSFAFEVTN-DFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENG---IPYWIVKNSWGPQWGMNGYFLIERGK----NMCGLAACASYPI 332          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.546e-11
Identity = 42/99 (42.42%), Postives = 54/99 (54.55%), Query Frame = -1
Query:   94 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYP-------NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLA 369
            L+ + + P++V  E    DF HY  GI+  +    P       NHAV  VGYG+ S+   +DY IVKNSWG  WGE GY RI+R T      CAI  +A
Sbjct:  362 LELVHHGPMAVAFEVYD-DFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSA-SGMDYWIVKNSWGTGWGENGYFRIRRGT----DECAIESIA 454          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11
Identity = 37/111 (33.33%), Postives = 56/111 (50.45%), Query Frame = -1
Query:   82 PVSVGIEASSKDFQHYSGGIFDGSCGTYPNHAVTAVGYG--------------------SSSSPE--AVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPI 348
            P+SV +  ++ DF  YS G+++G+C    NH+V  VGYG                    +S+ P+   + Y I+KNSW  KWGE G++R+ RN       C I +   +PI
Sbjct:  459 PLSVNVGVNN-DFVAYSEGVYNGTCSEELNHSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKKWGENGFMRLSRNKNGDNVFCGIGEEVFYPI 568          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11
Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = -1
Query:   73 PVSVGIEASSKDFQHYSGGIFDGSCGTYP----NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIKFK 348
            PV++ I+AS  DF++Y  G+++           +H V A+GYG+    +  DY +VKNSW   WG  GY+ + RN      LC ++  A++PI  K
Sbjct:  441 PVAIAIDASVDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYGTY---QGQDYFLVKNSWSTNWGMDGYVYMARN---DNNLCGVSSQATYPIPTK 530          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11
Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = -1
Query:   85 LKALANQ-PVSVGIEASSKDFQHYSGGIF-DGSCGTYP-NHAVTAVGYG-SSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFP 369
            +KA+A   P+SV I+A    FQ Y  GI+ D  C +   +H V  VGYG   +   +  + IVKNSWGP+WG  GY+++ ++       C I+  AS+P
Sbjct:  237 MKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKD---QNNHCGISTAASYP 332          
BLAST of DT214535 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11
Identity = 42/99 (42.42%), Postives = 54/99 (54.55%), Query Frame = -1
Query:   94 LKALANQPVSVGIEASSKDFQHYSGGIFDGSCGTYP-------NHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLA 369
            L+ + + P++V  E    DF HY  GI+  +    P       NHAV  VGYG+ S+   +DY IVKNSWG  WGE GY RI+R T      CAI  +A
Sbjct:  362 LELVHHGPMAVAFEVYD-DFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSA-SGMDYWIVKNSWGTGWGEDGYFRIRRGT----DECAIESIA 454          
The following BLAST results are available for this feature:
BLAST of DT214535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CATH_HUMAN1.493e-1144.09Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATC_CANFA1.950e-1142.42Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
CPR1_DROME2.546e-1140.21Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATLL_PHACE2.546e-1144.44Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATH_PIG2.546e-1144.09Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATC_HUMAN2.546e-1142.42Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CYSP_PLAFA3.326e-1133.33Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CFAD_DICDI3.326e-1135.42Counting factor associated protein D OS=Dictyostel... [more]
CATL1_PIG3.326e-1138.38Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATC_PONAB3.326e-1142.42Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13B10_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-13B10-C20-1-6.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214535 ID=DT214535; Name=DT214535; organism=Citrus sinensis; type=EST; length=369bp
CATTCATTGAANGCACAAGATATTATTTTTAGTCATAACTGAAGGCAAAC
ATACTATACACAGTTAAGTGGTCTTGAACTTGATGGGGAATGAAGCCAAC
TTGTTGATAGCACATAGGCCACCAGGTAATCCGGTGTTTCTCTTAATCCT
GATGTAGCCTCCCTCTCCCCATTTGGGTCCCCATGAATTTTTGACAATTA
TGTAATCCACTGCCTCCGGTGAAGAAGAAGATCCATACCCAACTGCTGTC
ACTGCGTGATTGGGATATGTTCCACAGGAGCCGTCGAATATACCCCCGCT
GTAATGTTGGAAATCCTTGCTAGAAGCCTCAATGCCGACGCTAACGGGCT
GGTTCGCCAGTGCTTTCAA
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