CN189370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13 Identity = 36/109 (33.03%), Postives = 55/109 (50.46%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 P+ + + T++F+ A+W WMT + +PS+H G W P+ D + R P FG NI+ G CG G + + + Y Y D+LGVG + L C Q+ F Sbjct: 163 PDLVATDPTVSFKTALWFWMT-AQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGY-----GDNLDCYNQRPF 265
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12 Identity = 36/109 (33.03%), Postives = 55/109 (50.46%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 P+ + + ++F+ AIW WMT + ++PS H+ +G W P+ DT + R P +G NI+ G+ CG G A + + Y Y +L V E L C QK F Sbjct: 148 PDLVATDPIISFKTAIWFWMTE-QDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNV-----PTGENLDCNNQKNF 250
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 35/109 (32.11%), Postives = 56/109 (51.38%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 P+ + + T++F++A W WMTP + +PS H+ +G W P+ +D + R P +G NI+ G CG+G + + + Y Y D+LGV L C Q F Sbjct: 213 PDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSY-----GNNLDCYNQSPF 315
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 36/109 (33.03%), Postives = 56/109 (51.38%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 P+ + +A +AF+AAIW WMT + +PS H G W+P+ D + R P +G NI+ G CG+G + + + Y Y ++ GV P L C Q++F Sbjct: 224 PDLVANDAVIAFKAAIWFWMT-AQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGV-----NPGGNLDCYNQRSF 326
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12 Identity = 41/110 (37.27%), Postives = 57/110 (51.82%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMN-NIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 PE +E + ++F+ AIW WM P + +PS H GNW P+ D + R P +G NI+ G CGQG +A N + + Y Y D LG G N L C +Q+ F Sbjct: 226 PELVETDPVISFKTAIWFWMKP-QSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGT---TYGSN--LDCYQQRPF 329
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12 Identity = 36/109 (33.03%), Postives = 54/109 (49.54%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 P+ + + T++F+ A+W WMT + +PS+H G W P+ D + R P FG NI+ G CG G + + + Y Y D+LGVG L C Q+ F Sbjct: 215 PDLVATDPTVSFKTAMWFWMT-AQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGY-----GNNLDCYSQRPF 317
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 34/109 (31.19%), Postives = 55/109 (50.46%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 P+ + + T++F++A W WMTP + +PS H+ +G W P+ +D + R +G NI+ G CG+G + + + Y Y D+LGV L C Q F Sbjct: 191 PDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSY-----GNNLDCYNQSPF 293
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 38/109 (34.86%), Postives = 55/109 (50.46%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 PE + + +AF+ A+W WMTP + ++PS H VG ++P D + R FG NI+ G C + +NN + Y Y +LGV GPN L C Q+ F Sbjct: 188 PEIVANCSDIAFQTALWFWMTP-RDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGV---DVGPN--LDCEHQQPF 290
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12 Identity = 35/109 (32.11%), Postives = 54/109 (49.54%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 P+ + +A ++F+ A W WMTP + +PS H+ G W P+ D + R P FG NI+ G CG+G + + + + Y Y D+L V L C Q+ F Sbjct: 203 PDLVATDAVISFKTAFWFWMTP-QSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSY-----GNNLDCNNQRPF 305
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12 Identity = 36/110 (32.73%), Postives = 55/110 (50.00%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQG-DIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 P+ + + +AF AIW WMT + +PS HD W P+ +D S R P +G NI+ G CG+G D + V +Y Y D+ VG + ++C +QK + Sbjct: 150 PDLVSSDPVVAFRTAIWFWMT-AQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGY-----GDNIACRDQKPY 253 The following BLAST results are available for this feature:
BLAST of CN189370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189370 ID=CN189370; Name=CN189370; organism=Citrus sinensis; type=EST; length=690bpback to top |