CN189366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.325e-37 Identity = 67/95 (70.53%), Postives = 78/95 (82.11%), Query Frame = 2 Query: 401 AGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 +GGWCNPP+QHFD+SQP +E IA Y+AGIVPV+Y+RVPC R GGIRF I+GH YF LV +TNVGG+G V +SIKGS T W MSRNWG NWQSN Sbjct: 118 SGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSN 212
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.730e-37 Identity = 65/94 (69.15%), Postives = 80/94 (85.11%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 GGWCNPP+ HFDL+ P+F +IA+Y+AGIVPVS+RRVPC ++GGIRFTING YFNLVL+TNV GAG++ + +KG+ T W MSRNWGQNWQSN Sbjct: 121 GGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSN 214
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.952e-37 Identity = 64/94 (68.09%), Postives = 81/94 (86.17%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 GGWCNPP+QHFD++QP +EQI Y+ GIVPV+++RV C+RKGG+RFTING+SYF LVLITNVGG G +++V IKG++T W MSRNWG NWQ+N Sbjct: 114 GGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQAN 207
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.588e-37 Identity = 66/95 (69.47%), Postives = 79/95 (83.16%), Query Frame = 2 Query: 401 AGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 AGGWCNPP++HFD+SQP + IA Y+AGIVPV+++RVPC + GGIRFTI+G YF LV + NVGG+G V VSIKGS+TDW MSRNWGQNWQSN Sbjct: 112 AGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSN 206
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.499e-36 Identity = 63/95 (66.32%), Postives = 79/95 (83.16%), Query Frame = 2 Query: 401 AGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 AGGWCNPP+QHFD+++P + +I Y GIVPV Y+RVPC+++GG+RFTING YF LVL++NVGG G +++VSIKGSRT W MSRNWG NWQSN Sbjct: 124 AGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSN 218
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.620e-35 Identity = 64/95 (67.37%), Postives = 79/95 (83.16%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGS-RTDWQPMSRNWGQNWQSN 685 GGWCNPP++HFDLS P F QIAQ KAGIVP+SYRRVPC + GGIR+TI G+ YFNLV+++NVGGAGDV +S+KG+ R W P+ RNWGQ WQ++ Sbjct: 132 GGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTS 226
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.339e-34 Identity = 63/95 (66.32%), Postives = 74/95 (77.89%), Query Frame = 2 Query: 401 AGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 AGGWCNPP++HFD+SQP +E IA Y +GIVPV Y R PC R GGIRF I GH Y+ LVL+TNV G+G V A +KGS T+W MSRNWG+NWQSN Sbjct: 116 AGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSN 210
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.055e-34 Identity = 60/94 (63.83%), Postives = 75/94 (79.79%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQS 682 GGWCNPP+ HFD++QP +E+I Y+AGI+PV Y+RVPC +KGG+RFTINGH YFNLVL+TNV G ++++ I GS TDW PM RNWG NW S Sbjct: 141 GGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHS 234
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 3.989e-34 Identity = 60/94 (63.83%), Postives = 78/94 (82.98%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 GGWCNPP+ HFD+SQP +E I Y+AGIVPV Y++V C R+GG+RFT++G +YF LVLITNV G+G V+A+S+KGS+T W P++RNWG NWQ N Sbjct: 118 GGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCN 211
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 6.805e-34 Identity = 60/94 (63.83%), Postives = 74/94 (78.72%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQS 682 GGWCNPP+ HFD++QP +E+I Y AGI+PV Y+RVPC +KGG+RFTINGH YFNLVL+TNV G ++++ I GS TDW PM RNWG NW S Sbjct: 125 GGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHS 218 The following BLAST results are available for this feature:
BLAST of CN189366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189366 ID=CN189366; Name=CN189366; organism=Citrus sinensis; type=EST; length=685bpback to top |