CN189365
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.148e-20 Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 L+TN+ G+G + ++S+KGS T W MSRNWG NWQ + L GQ+LSF VT++ G T+V ++V PAGWSFGQTFS Q Sbjct: 169 LVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFSTYQ 245
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.148e-20 Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = -3 Query: 409 LITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 630 L+TNV G ++++ I GS TDW PM RNWG NW S SYL GQ+LSF+VT DG T+V N+ P+GW FGQTF+ Sbjct: 182 LVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGWKFGQTFT 256
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.806e-20 Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 LI+NVGGAGDVR+V IKG+ + W M RNWGQ W NS GQ LSF++T+SDG T+ + NV P W FG+T++G Q Sbjct: 178 LISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYTGKQ 254
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.664e-20 Identity = 43/75 (57.33%), Postives = 53/75 (70.67%), Query Frame = -3 Query: 409 LITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 630 L+TNV G ++++ I GS TDW PM RNWG NW S SYL GQ LSF+VT DG T+V N+ P+GW FGQTF+ Sbjct: 198 LVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFA 272
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.250e-20 Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSR--TDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 L+TNV AG VR++ ++GSR W MSRNWG NWQS +YL+GQ LSF+VT +DG T+V V P W FGQTF+ Q Sbjct: 182 LVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSWRFGQTFASTQ 260
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 8.163e-20 Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = -3 Query: 406 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSG 630 LI NVGGAGD++ V +KG++T W M +NWGQNW + + L GQ LSF+VTTSDG T NV P W FGQTF G Sbjct: 195 LIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDG 269
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 8.163e-20 Identity = 46/72 (63.89%), Postives = 52/72 (72.22%), Query Frame = -3 Query: 406 NVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSG 621 NVGGAGD+ AVS KGS+T W MSR WGQNW +N L GQS+S +VTTSDG T +V PA W FGQTF G Sbjct: 187 NVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDG 258
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.819e-19 Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = -3 Query: 409 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 630 L+ NV G+G V AVS++G+ T W MSRNWG NWQS + L GQ LSF VTT+ G ++ +VAPAGW FGQTFS Sbjct: 175 LVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGWKFGQTFS 248
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.819e-19 Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = -3 Query: 406 NVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSG 621 NVGGAGD++ + +KG +T W M +NWGQNW + L GQ +SF+VTTSDG T NNV P W FGQTF G Sbjct: 201 NVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 272
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.819e-19 Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = -3 Query: 409 LITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 630 L+TNV AG ++++ + GS T DW PM+RNWG W S +YL GQ LSF+VT +D T+V NV P GW FGQTF+ Sbjct: 187 LVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGWKFGQTFA 261 The following BLAST results are available for this feature:
BLAST of CN189365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189365 ID=CN189365; Name=CN189365; organism=Citrus sinensis; type=EST; length=632bpback to top |