CN189365
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.819e-19 Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = -3 Query: 406 NVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSG 621 NVGGAGD++ + +KG +T W M +NWGQNW + L GQ +SF+VTTSDG T NNV P W FGQTF G Sbjct: 194 NVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 265
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.375e-19 Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = -3 Query: 409 LITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 630 L+TNV G ++++ + GS TDW PM RNWG NW S SYL GQ LSF+VT DG T+V N+ P+GW FGQTF+ Sbjct: 200 LVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFA 274
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.102e-19 Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = -3 Query: 409 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 630 L+TN+ G+G + ++S+KGS T W M+RNWG NWQ + L GQ+LSF VT++ G T+V ++ PAGWSFGQTFS Sbjct: 169 LVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 242
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 5.291e-19 Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = -3 Query: 406 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSG 630 LI NVGGAGD++ V +K ++T W M +NWGQNW +++ L GQ LSF+VTT+DG T NV P W FGQTF G Sbjct: 201 LIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFGQTFDG 275
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.291e-19 Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = -3 Query: 409 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 630 L+TN+ G+G + ++S+KGS T W M+RNWG NWQ + L GQ+LSF VT++ G T+V ++ PAGWSFGQTFS Sbjct: 160 LVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 233
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.291e-19 Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = -3 Query: 412 LITNVGGAGDVRAVSIKGSRTD-WQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTF 630 LI+NV G G++ V IKGS+++ W+ MSRNWG N+QSN+YLNGQSLSFKV SDG + NV P+ W FGQ+F Sbjct: 176 LISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRFGQSF 249
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 9.026e-19 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 L++NV G+G VR+VS+KG T W ++RNWG NWQ NS L GQ+LSF VT++ G T+ NV P+ WSFG TF+ Q Sbjct: 175 LVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWWSFGMTFTSNQ 251
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.179e-18 Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = -3 Query: 409 LITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 630 L+TNVG AG ++A+ +KGS++ DW M+ NWG W S +YL GQ LSF+VT +DG T+V NV GW FGQTF+ Sbjct: 182 LLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGWRFGQTFA 256
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.626e-18 Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = -3 Query: 409 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 630 LI+NV G+G +++V +KG TD P+SRNWG NWQS++ L GQ+L+F VT++ G T+V N+ PA W FGQ+FS Sbjct: 180 LISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSFS 253
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 3.430e-18 Identity = 45/77 (58.44%), Postives = 53/77 (68.83%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 LITNV G+G V + IKG+ T W MSRNWG NWQS + L GQ+LSF VTT+ G + +VAPA W FGQTFS Q Sbjct: 176 LITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWWQFGQTFSTYQ 252 The following BLAST results are available for this feature:
BLAST of CN189365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189365 ID=CN189365; Name=CN189365; organism=Citrus sinensis; type=EST; length=632bpback to top |