CN189362
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 4.693e-52 Identity = 94/175 (53.71%), Postives = 117/175 (66.86%), Query Frame = 1 Query: 115 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPM 627 W+ A ATFY YG+LYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ +TATNFC GGWCNPP+ HFD++QP ++ I YRAG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ + GS T W PM Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPM 226
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 6.130e-52 Identity = 95/175 (54.29%), Postives = 116/175 (66.29%), Query Frame = 1 Query: 115 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPM 627 W+ A ATFY Y +LYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ VTATNFC GGWCNPP+ HFD++QP ++ I YRAG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ I GS T W PM Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPM 224
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 6.130e-52 Identity = 95/172 (55.23%), Postives = 118/172 (68.60%), Query Frame = 1 Query: 112 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 GW + RATFY YG+L+ QGYG TAALSTALFNNG CG+CYEI C + P+WCLPG+I +TATNFC WCNPPQ+HFDLSQP+F IA+Y+AGVVPV ++RVPC + GG++F I G+ +F ++L NVGGAG V A+ IKG+RT W M Sbjct: 89 GWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPND--NWCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAM 258
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.783e-51 Identity = 96/176 (54.55%), Postives = 119/176 (67.61%), Query Frame = 1 Query: 112 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPM 627 GW+ A ATFY YGNLY+ GY TNTAALSTALFN+G SCG CY+I C P+WCL G +I +TATNFC GGWCNPP+ HFD++QP F IA+Y+AG+VP+ YK+V C R GG+RFTING +YF LVLI+NV G G++ V IKGS++ W+ M Sbjct: 27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETM 202
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 202.216 bits (513), Expect = 1.783e-51 Identity = 94/175 (53.71%), Postives = 115/175 (65.71%), Query Frame = 1 Query: 115 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPM 627 W A ATFY YG+LYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ +TATNFC GGWCNPP+ HFD++QP ++ I Y AG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ I GS T W PM Sbjct: 34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPM 208
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 5.189e-51 Identity = 94/182 (51.65%), Postives = 116/182 (63.74%), Query Frame = 1 Query: 97 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR--TGWQPM 627 A GW ATFY YGNLY+QGYGT TAALSTALF++G SCG CY + C DP+WC G ++ VTATNFC GGWCNPP+ HFD++QP ++ I YR G+VPVA++RVPC RRGG+RFT+ G YF LVL+TNV AG V ++ ++GSR GW M Sbjct: 28 AFAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAM 209
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 6.777e-51 Identity = 96/172 (55.81%), Postives = 115/172 (66.86%), Query Frame = 1 Query: 121 NARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 +A ATFY YGNLY+ GYG AALS+ALFN+G CG+CY I C + KWC PG +I +TATN C GGWCNPP+QHFD+SQP +++IA Y+AG+VPV YKRVPC R GGIRF I+GH YF LV +TNVGG+G V +SIKGS TGW M Sbjct: 30 SAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAM 201
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.510e-50 Identity = 94/175 (53.71%), Postives = 116/175 (66.29%), Query Frame = 1 Query: 112 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 G N ATFY YG+LYS GYGT TAALSTALFN+G SCG CY I C + D +WCL G ++++TATNFC GGWCNPP +HFD++QP ++ I YR G+VPV ++RV C ++GG+RF ING YF LV I NVGGAG + +VSIKGS+TGW M Sbjct: 25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAM 199
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 4.393e-50 Identity = 93/174 (53.45%), Postives = 112/174 (64.37%), Query Frame = 1 Query: 115 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDP--KWCLP-GTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 WI A ATFY YGNLY QGYG AALSTALFN+G +CG CY I C D +WC P G + VTATN C GGWCNPP++HFD+SQP ++ I YRAG+VPV Y+RV C RRGG+RFT+ G +F LVL+ NV G+G V AVS++G+ TGW M Sbjct: 27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQM 200
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.180e-49 Identity = 94/173 (54.34%), Postives = 112/173 (64.74%), Query Frame = 1 Query: 115 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 W A ATFY YGNLY+ GYG N AALS+ALFN+G CG+CY I C + WC PGT I +TATN C GGWCNPP++HFD+SQP + IA Y+AG+VPV +KRVPC + GGIRFTI+G YF LV + NVGG+G V VSIKGS+T W M Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAM 195 The following BLAST results are available for this feature:
BLAST of CN189362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189362 ID=CN189362; Name=CN189362; organism=Citrus sinensis; type=EST; length=627bpback to top |