CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB18_PONAB (Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLD 429 +K + +G+ VGK+ LL+ +T +TF + T+ +F + V+G+ L +WDTAGQE + L P YRGA IL + + + ++ + W+ EL+ Y I+ LVG K+D Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLD-NWLNELETYCTRNDIVNMLVGNKID 125
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB18_MOUSE (Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLD 429 +K + +G+ VGK+ LL+ +T +TF + T+ +F + V+G+ L +WDTAGQE + L P YRGA IL + + + ++ + W+ EL+ Y I+ LVG K+D Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLD-NWLNELETYCTRNDIVNMLVGNKID 125
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB18_HUMAN (Ras-related protein Rab-18 OS=Homo sapiens GN=RAB18 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLD 429 +K + +G+ VGK+ LL+ +T +TF + T+ +F + V+G+ L +WDTAGQE + L P YRGA IL + + + ++ + W+ EL+ Y I+ LVG K+D Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLD-NWLNELETYCTRNDIVNMLVGNKID 125
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB18_CHICK (Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLD 429 +K + +G+ VGK+ LL+ +T +TF + T+ +F + V+G+ L +WDTAGQE + L P YRGA IL + + + ++ + W+ EL+ Y I+ LVG K+D Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLD-NWLNELETYCTRNDIVKMLVGNKID 125
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB18_BOVIN (Ras-related protein Rab-18 OS=Bos taurus GN=RAB18 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLD 429 +K + +G+ VGK+ LL+ +T +TF + T+ +F + V+G+ L +WDTAGQE + L P YRGA IL + + + ++ + W+ EL+ Y I+ LVG K+D Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLD-NWLNELETYCTRNDIVNMLVGNKID 125
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB33B_PONAB (Ras-related protein Rab-33B OS=Pongo abelii GN=RAB33B PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.259e-13 Identity = 43/124 (34.68%), Postives = 65/124 (52.42%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNR-LRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHY--APGVPIILVGTKLDLR 435 SR K + +GD VGKTCL + + FP T+ +F V ++G + + LWDTAGQE + + + YR + + + + AS+ ++ WI E K + A +P ILVG K DLR Sbjct: 31 SRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PSWIEECKQHLLASDIPRILVGNKCDLR 153
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.259e-13 Identity = 40/118 (33.90%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 435 K V +GD VGK+ LL +T N F + T+ F+ + ++G + +WDTAGQE Y + YRGA +L + + ++E +W+ EL+ H P + ++L+G K DLR Sbjct: 15 KLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAG-RWLKELRDHTDPNIVVMLIGNKSDLR 131
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.259e-13 Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSAN-VVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRDDK 444 K V +GD AVGKT +L + N F D T+ F +V+ +V +WDTAGQE Y + YRGA +L + + + +++++ +W+ EL+ +A + I+L G K DL D + Sbjct: 17 KVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHI-PRWLEELRAHADRNIVIMLTGNKTDLEDQR 136
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.259e-13 Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQ 447 K V +GD VGK+ LL Y N F + T+ FS + ++ + L LWDTAGQE YN + Y+GA ++ +++ + S+ N+ +KW+ + + A I+LVG K DL++ ++ Sbjct: 13 KIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNL-EKWLKKFRENAHQDYGIMLVGNKSDLKEYRE 133
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RASK_XENLA (GTPase KRas OS=Xenopus laevis GN=kras PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.259e-13 Identity = 50/156 (32.05%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VG VGK+ L I N F +Y PT+ D++ VV++G T L + DTAGQE+Y+ +R R + F+ F++ + S+E++ ++ I +K + VP++LVG K L + + T ++L + G P +IE S+K Sbjct: 5 KLVVVGAVGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNIKSFEDIHHYREQIKRVKD-SEDVPMVLVGNKCAL-----------PSRTVDTKQAQDLARSYGIP-FIETSAK 147 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |