CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOQ_RAT (Rho-related GTP-binding protein RhoQ OS=Rattus norvegicus GN=Rhoq PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 7.685e-47 Identity = 85/156 (54.49%), Postives = 118/156 (75.64%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQEDY+RLRPLSY DVF++ FS+++ AS++NV ++W+PELK YAP VP +L+GT++DLRDD + ++ P+ G++L K IGA Y+ECS+ Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSA 165
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOQ_MOUSE (Rho-related GTP-binding protein RhoQ OS=Mus musculus GN=Rhoq PE=1 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 7.685e-47 Identity = 85/156 (54.49%), Postives = 118/156 (75.64%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQEDY+RLRPLSY DVF++ FS+++ AS++NV ++W+PELK YAP VP +L+GT++DLRDD + ++ P+ G++L K IGA Y+ECS+ Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSA 165
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOG_MOUSE (Rho-related GTP-binding protein RhoG OS=Mus musculus GN=Rhog PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.004e-46 Identity = 92/156 (58.97%), Postives = 111/156 (71.15%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLR--DDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGDGAVGKTCLLI YT+N FP +Y+PTVFDN+SA V+G TVNL LWDTAGQE+Y+RLR LSY +VF++ FS+ S SYENV KW PE+ H+ P VPI+LVGTK DLR D + G PI+ G+ L K I A Y+ECS+ Sbjct: 4 IKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSA 159
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOG_HUMAN (Rho-related GTP-binding protein RhoG OS=Homo sapiens GN=RHOG PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.004e-46 Identity = 92/156 (58.97%), Postives = 111/156 (71.15%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLR--DDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGDGAVGKTCLLI YT+N FP +Y+PTVFDN+SA V+G TVNL LWDTAGQE+Y+RLR LSY +VF++ FS+ S SYENV KW PE+ H+ P VPI+LVGTK DLR D + G PI+ G+ L K I A Y+ECS+ Sbjct: 4 IKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSA 159
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOG_CRICR (Rho-related GTP-binding protein RhoG OS=Cricetus cricetus GN=RHOG PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.004e-46 Identity = 92/156 (58.97%), Postives = 111/156 (71.15%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLR--DDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGDGAVGKTCLLI YT+N FP +Y+PTVFDN+SA V+G TVNL LWDTAGQE+Y+RLR LSY +VF++ FS+ S SYENV KW PE+ H+ P VPI+LVGTK DLR D + G PI+ G+ L K I A Y+ECS+ Sbjct: 4 IKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSA 159
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: CDC42_ASHGO (Cell division control protein 42 OS=Ashbya gossypii GN=CDC42 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.004e-46 Identity = 85/156 (54.49%), Postives = 114/156 (73.08%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 +KCV VGDGAVGKTCLLISYT+N FP DYVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVF++ FS++S S+ENV +KW PE+ H+ PGVP ++VGT++DLR++K + PI+ GE+ + + A Y+ECS+ Sbjct: 4 LKCVVVGDGAVGKTCLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVVSPPSFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRENKMVIEKLQRQRLRPITPEQGEKFARELRAVKYVECSA 159
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOJ_MOUSE (Rho-related GTP-binding protein RhoJ OS=Mus musculus GN=Rhoj PE=1 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 2.236e-46 Identity = 86/159 (54.09%), Postives = 117/159 (73.58%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 +R +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ V V G LGL+DTAGQEDYN+LRPLSY DVF++ FS+++ ASY NV ++W+PELK P VP +L+GT++DLRDD + + + P++ HG +L K IGA Y+ECS+ Sbjct: 19 NRILKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSA 177
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RACA_DICDI (Rho-related protein racA OS=Dictyostelium discoideum GN=racA PE=1 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 2.236e-46 Identity = 88/154 (57.14%), Postives = 114/154 (74.03%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IK V VGDGAVGK+CLLI+YT+N FP +YVPTVFDN+SANV+++G NLGLWDTAGQEDY+RLRPLSY DVF++ FS++S+AS+EN+ KW PE+ H+AP +PI+LVGTK DLR + P +S A L + +G Y+E S+ Sbjct: 4 IKLVVVGDGAVGKSCLLIAYTTNAFPGEYVPTVFDNYSANVMIDGKPFNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIVSRASFENIRAKWYPEILHHAPNIPIVLVGTKNDLRGHHD--LKRP---EVSAAEANNLVRELGFSGYVETSA 152
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: CDC42_AEDAE (Cdc42 homolog OS=Aedes aegypti GN=Cdc42 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.236e-46 Identity = 86/156 (55.13%), Postives = 116/156 (74.36%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQEDY+RLRPLSY DVF++ FS++S +S+ENV +KW+PE+ H+ P +LVGT++DLRD++ + PI+ GE+L K + A Y+ECS+ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDEQSTLEKLAKNKQKPITLEQGEKLAKELKAVKYVECSA 159
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RACC_ENTHI (Rho-related protein racC OS=Entamoeba histolytica GN=RACC PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 2.920e-46 Identity = 90/157 (57.32%), Postives = 111/157 (70.70%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 IK V VGDGAVGKTCLLI YT+N FP DY+PTVFDN+ ++ + L LWDTAGQE+Y++LRPLSY A +F++ FS+ S SY+NV KW PE+ H+AP VPIILVGTKLD R+D + G I+TA GEEL+ I A YIECS+K Sbjct: 8 IKLVVVGDGAVGKTCLLICYTTNEFPKDYIPTVFDNYVVSLTAGTRQIQLALWDTAGQEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAK 164 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |