CX286803

Overview
NameCX286803
Unique NameCX286803
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length523
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_MYCTU (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium tuberculosis GN=ilvE PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.218e-27
Identity = 64/156 (41.03%), Postives = 92/156 (58.97%), Query Frame = 2
Query:    2 NKRWIPPSG-KGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN----VISTPVIKGTILPGITRKSIIDVAQSQGF 454
            +K W+P +G + +LY+RP +  +   LG+ PA +Y +L+  SP G YFK GIAP+++ V  E  RA PGGTG  K  GNY             G   V++LD V +RY+EE+   NIF V G+     + TP + G++LPGITR S++ +A   GF
Sbjct:  130 DKAWVPGAGGEEALYLRPFIFATEPGLGVRPATQYRYLLIASPAGAYFKGGIAPVSVWVSTEYVRACPGGTGAAKFGGNYAASLLAQAEAAENGCDQVVWLDAVERRYIEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGITRDSLLQLAIDAGF 285          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_STAAW (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MW2) GN=ilvE PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.714e-27
Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 2
Query:   11 WIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQ 457
            WIP     SLYIRP +  +   LG+  + +Y  LI +SP G Y+  E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++
Sbjct:  125 WIPEGEGQSLYIRPFVFATEGALGVGASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYE 274          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_STAAS (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MSSA476) GN=ilvE PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.714e-27
Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 2
Query:   11 WIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQ 457
            WIP     SLYIRP +  +   LG+  + +Y  LI +SP G Y+  E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++
Sbjct:  125 WIPEGEGQSLYIRPFVFATEGALGVGASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYE 274          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_STAAN (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain N315) GN=ilvE PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.714e-27
Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 2
Query:   11 WIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQ 457
            WIP     SLYIRP +  +   LG+  + +Y  LI +SP G Y+  E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++
Sbjct:  125 WIPEGEGQSLYIRPFVFATEGALGVGASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYE 274          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_STAAM (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ilvE PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.714e-27
Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 2
Query:   11 WIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQ 457
            WIP     SLYIRP +  +   LG+  + +Y  LI +SP G Y+  E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++
Sbjct:  125 WIPEGEGQSLYIRPFVFATEGALGVGASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYE 274          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_STAAC (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain COL) GN=ilvE PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.714e-27
Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 2
Query:   11 WIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQ 457
            WIP     SLYIRP +  +   LG+  + +Y  LI +SP G Y+  E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++
Sbjct:  125 WIPEGEGQSLYIRPFVFATEGALGVGASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYE 274          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE1_BACSU (Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis GN=ilvE PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.032e-26
Identity = 62/150 (41.33%), Postives = 86/150 (57.33%), Query Frame = 2
Query:    5 KRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG-IAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQG 451
            K W+P     SLYIRP ++ +   LG+  +  YTF+I +SPVG+Y+ +  + P+ + VE E  RA  GG G  KT GNY             GY  VL+LD + K+Y+EEV S NIF V      TP + G+IL G+TR S I++ +S G
Sbjct:  124 KDWVPKEKGTSLYIRPFVIATEPSLGVKASRSYTFMIVLSPVGSYYGDDQLKPVRIYVEDEYVRAVNGGVGFAKTAGNYAASLQAQRKANELGYDQVLWLDAIEKKYVEEVGSMNIFFVINGEAVTPALSGSILSGVTRASAIELIRSWG 273          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_STAES (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ilvE PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 3.920e-26
Identity = 62/150 (41.33%), Postives = 85/150 (56.67%), Query Frame = 2
Query:   11 WIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQ 457
            W+P     SLYIRP +  +  VLG+  + +Y  LI +SP G Y+  + +    + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII +A+  G++
Sbjct:  125 WVPEGEGQSLYIRPFVFATEGVLGVRSSHQYKLLIILSPSGAYYGGDTLKSTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYE 274          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_MYCLE (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium leprae GN=ilvE PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 3.920e-26
Identity = 61/153 (39.87%), Postives = 89/153 (58.17%), Query Frame = 2
Query:   11 WIPP-SGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN----VISTPVIKGTILPGITRKSIIDVAQSQGF 454
            W+P   G+ +LY+RP +  +   LG+ PA +Y +L+  SPVG YFK GI P+ + V  E  RA+PGGTG  K  GNY             G   V++LD V +R++EE+   NIF V G+     + TP + G++LPG+TR S++ +A   GF
Sbjct:  133 WVPRVGGEEALYLRPFIFATEPGLGVRPAKQYRYLLIASPVGAYFKGGINPVTVWVSMEYVRASPGGTGAAKFGGNYAASLLAQTEAAANGCDQVVWLDAVERRFVEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGVTRASLLQLAIDAGF 285          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_STAEQ (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ilvE PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.119e-26
Identity = 61/150 (40.67%), Postives = 85/150 (56.67%), Query Frame = 2
Query:   11 WIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQ 457
            W+P     SLYIRP +  +  +LG+  + +Y  LI +SP G Y+  + +    + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII +A+  G++
Sbjct:  125 WVPEGEGQSLYIRPFVFATEGILGVRSSHQYKLLIILSPSGAYYGGDTLKSTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYE 274          
The following BLAST results are available for this feature:
BLAST of CX286803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
ILVE_MYCTU1.218e-2741.03Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAW2.714e-2742.67Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAS2.714e-2742.67Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAN2.714e-2742.67Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAM2.714e-2742.67Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAC2.714e-2742.67Probable branched-chain-amino-acid aminotransferas... [more]
ILVE1_BACSU1.032e-2641.33Branched-chain-amino-acid transaminase 1 OS=Bacill... [more]
ILVE_STAES3.920e-2641.33Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_MYCLE3.920e-2639.87Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAEQ5.119e-2640.67Probable branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionC01001B12Rv Veg1 Citrus clementina cDNA clone C01001B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286803 ID=CX286803; Name=CX286803; organism=Citrus clementina; type=EST; length=523bp
AAACAAACGTTGGATCCCTCCTTCTGGTAAAGGTTCCTTATATATCAGGC
CATTGCTAATGGGAAGTGGAGCTGTTCTTGGTCTTGCACCTGCTCCTGAA
TATACATTTCTGATTTATGTTTCACCTGTTGGGAACTACTTTAAGGAAGG
CATTGCACCCATAAATTTGGTTGTTGAGCATGAATTACATCGTGCAACTC
CTGGGGGAACTGGAGGCGTAAAGACTATAGGAAACTATGCTGCGGTTCTT
AAGGCTCAATCTGCTGCGAAGGCCAAAGGTTATTCTGATGTTCTTTACCT
TGATTGTGTTCACAAGAGATACCTGGAAGAGGTTTCCTCTTGCAACATTT
TTGTCGTGAAGGGCAATGTTATATCCACTCCTGTGATAAAAGGAACTATC
TTACCTGGCATTACAAGAAAGAGTATAATTGATGTTGCTCAAAGCCAAGG
GTTCCAGGTTGAGGAACGCCTTGTGACAGTGGAGGAGTTACTTGATGCTG
ATGAAGTTTTTTGTACTGGTACA
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