CX286803

Overview
NameCX286803
Unique NameCX286803
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length523
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.305e-21
Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 2
Query:    2 NKRWIPPSGKGS-LYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXG-----YSDVLYLDCVHKRYLEEVSSCNIF-VVKGNVISTPVIKGTILPGITRKSIIDVAQSQ 448
            N+ W+ P G G+ LY+RP L+G G  +G+  APE+ F ++  PVG YFK G+AP N +   +  RA P GTGGVK  GNY             G     ++D +YLD      +EEV + N F + K N   TP  + +ILP IT+ S++ +A+ +
Sbjct:  109 NQDWLGPYGSGATLYLRPFLIGVGENIGVKTAPEFIFSVFCCPVGAYFKGGLAPSNFITT-DYDRAAPMGTGGVKVGGNYAASLLPHELAAEQGTPERKFADAIYLDPKTHTKIEEVGAANFFGITKDNKFITPKSE-SILPSITKYSLLHIAKER 262          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21
Identity = 57/149 (38.26%), Postives = 80/149 (53.69%), Query Frame = 2
Query:    2 NKRWIPPSGKG-SLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINL-VVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQ 442
            N++W+ P   G SLY+RP ++G G  LG+ PA EY F+++ +PVG YFK GI       +     RA P GTGGVK  GNY             GY D +YLD      +EEV + N F +  +         +ILP +TRKS++ +A+
Sbjct:  112 NQKWLAPYKSGASLYLRPFVIGVGDNLGVKPASEYLFIVFCAPVGAYFKGGIEKGGARFITTAFDRAAPKGTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDDAFITPHSPSILPSVTRKSLMVLAK 260          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.443e-20
Identity = 57/149 (38.26%), Postives = 80/149 (53.69%), Query Frame = 2
Query:    2 NKRWIPPSGKG-SLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINL-VVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQ 442
            N++W+ P   G SLY+RP ++G G  LG+ PA EY F+++ +PVG YFK GI       +     RA P GTGGVK  GNY             GY D +YLD      +EEV + N F +  +         +ILP IT+KS++ +A+
Sbjct:  112 NQKWLAPYKSGASLYLRPFVIGVGDNLGVKPANEYLFIVFCAPVGAYFKGGIEKGGARFITTIFDRAAPKGTGGVKVGGNYAASLLAHKMATEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDDAFITPHSPSILPSITKKSLMVLAK 260          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT_DICDI (Branched-chain-amino-acid aminotransferase OS=Dictyostelium discoideum GN=bcaA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.916e-19
Identity = 58/157 (36.94%), Postives = 82/157 (52.23%), Query Frame = 2
Query:    2 NKRWIPPSGKG-SLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN------VISTPVIKGTILPGITRKSIIDVAQSQG 451
            +K WIP  GKG SLY+RP L+ +   LG+  +      +  SPVG Y+ EG  P+ L+ + +  RA  GG+G  K   NY             G+S VL+L      Y+ EV + N+FV   N      +I+ P+  GTILPG+TR SI+ + Q  G
Sbjct:  140 DKDWIP-EGKGYSLYLRPTLIATQNSLGVGASNSALMFVIASPVGPYYPEGFKPVKLIADDQYVRAWAGGSGAFKLGSNYAPTIFPQLEAAKKGFSQVLWL---LNDYVTEVGTMNMFVFWNNAQGEKELITPPLGDGTILPGVTRDSILKLTQQWG 292          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCA1_SCHPO (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Schizosaccharomyces pombe GN=eca39 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 2.547e-17
Identity = 53/152 (34.87%), Postives = 73/152 (48.03%), Query Frame = 2
Query:    8 RWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN-----VISTPVIKGTILPGITRKSIIDVAQSQ 448
            RW+P     SLYIRP  +G+   LG+         +  SPVG Y+  G   + L    E  RA PGGTG  K  GNY             GY+ +L+L    + Y+ EV + N F V  N      I T  + G ILPG+TR SI+++ + +
Sbjct:  138 RWVPDQRGYSLYIRPTFIGTDEALGVHHCDNAMLYVIASPVGPYYSSGFKAVKLCCSEESVRAWPGGTGHYKLGGNYAPSVLPQKEAAKKGYAQILWL-YGDEDYITEVGTMNCFTVWINKNGEKEIITAPLDGMILPGVTRDSILEICRER 288          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT2_PONAB (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Pongo abelii GN=BCAT2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.344e-17
Identity = 54/156 (34.62%), Postives = 81/156 (51.92%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG-IAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVV---KGNVIS--TPVIKGTILPGITRKSIIDVAQSQG 451
            +K W+P +   SLY+RP+L+G+   LG++        + + PVG YF  G + P++L+ +    RA  GG G  K  GNY             G   VL+L       L EV + NIFV    +  V+   TP + G ILPG+ R+S++D+AQ+ G
Sbjct:  155 DKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRALLFVILCPVGTYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKQGCEQVLWL-YGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDLAQTWG 309          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT_CAEEL (Branched-chain-amino-acid aminotransferase, cytosolic OS=Caenorhabditis elegans GN=bcat-1 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 7.409e-17
Identity = 51/156 (32.69%), Postives = 77/156 (49.36%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN------VISTPVIKGTILPGITRKSIIDVAQSQG 451
            ++ W+P S   SLY+RP L+G+   LG+  A E    +   PVG Y+  G  P++L+ +    RA PGG G  K   NY                 VL+L       L EV + NIF+   N      +I+ P+ +G ILPG+TR S++++ +  G
Sbjct:  171 DQEWVPNSDVCSLYLRPTLIGTDPTLGVGCATEAKMFVITGPVGAYYSTGFQPVSLLADSRFIRAFPGGVGAYKMGCNYAPTIWVGKEAASKNCQQVLWL-YGENEDLTEVGTMNIFLFWKNEEGDMELITPPLHRGLILPGVTRDSLLELGREWG 325          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT2_HUMAN (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Homo sapiens GN=BCAT2 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 7.409e-17
Identity = 54/156 (34.62%), Postives = 81/156 (51.92%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG-IAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVV---KGNVIS--TPVIKGTILPGITRKSIIDVAQSQG 451
            +K W+P +   SLY+RP+L+G+   LG++        + + PVG YF  G + P++L+ +    RA  GG G  K  GNY             G   VL+L       L EV + NIFV    +  V+   TP + G ILPG+ R+S++D+AQ+ G
Sbjct:  155 DKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWL-YGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWG 309          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT_NEMVE (Branched-chain-amino-acid aminotransferase OS=Nematostella vectensis GN=v1g246094 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.677e-17
Identity = 54/155 (34.84%), Postives = 79/155 (50.97%), Query Frame = 2
Query:    5 KRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG-IAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN-----VISTPVIKGTILPGITRKSIIDVAQSQG 451
            + W+P S   SLYIRP ++G+ A LG+  A      + +SPVG YF+ G   P+ L+ + +  RA PGG G  K  GNY             G   VL+L       + EV + N+F+   N      + TP + G ILPG+TR S++ +A+  G
Sbjct:  167 REWVPHSNTCSLYIRPTMIGTQASLGVNKANSAMLFVILSPVGPYFRTGTFNPVALLADPQYVRAWPGGVGDCKMGGNYAPTILAQQNAERQGLQQVLWL-FGEDHQITEVGTMNMFMFWINENGEKELVTPPLNGLILPGVTRDSLLALAKRWG 320          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT1_MOUSE (Branched-chain-amino-acid aminotransferase, cytosolic OS=Mus musculus GN=Bcat1 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 9.677e-17
Identity = 54/156 (34.62%), Postives = 79/156 (50.64%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG-IAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN-----VISTPVIKGTILPGITRKSIIDVAQSQG 451
            ++ W+P S   SLYIRP  +G+   LG+    +    + +SPVG YF  G   P++L    +  RA  GGTG  K  GNY             G   VL+L       + EV + N+F+   N      ++TP + G ILPG+TR+SI+++AQ  G
Sbjct:  148 DQEWVPYSTSASLYIRPTFIGTEPSLGVKKPSKALLFVILSPVGPYFSSGSFTPVSLWANPKYIRAWKGGTGDCKMGGNYGASLLAQCEAVENGCQQVLWL-YGKDNQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRQSILELAQQWG 302          
The following BLAST results are available for this feature:
BLAST of CX286803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
ILVE_HAEIN1.305e-2138.46Branched-chain-amino-acid aminotransferase OS=Haem... [more]
ILVE_HELPJ3.797e-2138.26Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HELPY1.443e-2038.26Branched-chain-amino-acid aminotransferase OS=Heli... [more]
BCAT_DICDI7.916e-1936.94Branched-chain-amino-acid aminotransferase OS=Dict... [more]
BCA1_SCHPO2.547e-1734.87Branched-chain-amino-acid aminotransferase, mitoch... [more]
BCAT2_PONAB4.344e-1734.62Branched-chain-amino-acid aminotransferase, mitoch... [more]
BCAT_CAEEL7.409e-1732.69Branched-chain-amino-acid aminotransferase, cytoso... [more]
BCAT2_HUMAN7.409e-1734.62Branched-chain-amino-acid aminotransferase, mitoch... [more]
BCAT_NEMVE9.677e-1734.84Branched-chain-amino-acid aminotransferase OS=Nema... [more]
BCAT1_MOUSE9.677e-1734.62Branched-chain-amino-acid aminotransferase, cytoso... [more]

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Properties
Property NameValue
Genbank descriptionC01001B12Rv Veg1 Citrus clementina cDNA clone C01001B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286803 ID=CX286803; Name=CX286803; organism=Citrus clementina; type=EST; length=523bp
AAACAAACGTTGGATCCCTCCTTCTGGTAAAGGTTCCTTATATATCAGGC
CATTGCTAATGGGAAGTGGAGCTGTTCTTGGTCTTGCACCTGCTCCTGAA
TATACATTTCTGATTTATGTTTCACCTGTTGGGAACTACTTTAAGGAAGG
CATTGCACCCATAAATTTGGTTGTTGAGCATGAATTACATCGTGCAACTC
CTGGGGGAACTGGAGGCGTAAAGACTATAGGAAACTATGCTGCGGTTCTT
AAGGCTCAATCTGCTGCGAAGGCCAAAGGTTATTCTGATGTTCTTTACCT
TGATTGTGTTCACAAGAGATACCTGGAAGAGGTTTCCTCTTGCAACATTT
TTGTCGTGAAGGGCAATGTTATATCCACTCCTGTGATAAAAGGAACTATC
TTACCTGGCATTACAAGAAAGAGTATAATTGATGTTGCTCAAAGCCAAGG
GTTCCAGGTTGAGGAACGCCTTGTGACAGTGGAGGAGTTACTTGATGCTG
ATGAAGTTTTTTGTACTGGTACA
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