CX286936

Overview
NameCX286936
Unique NameCX286936
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286936 vs. ExPASy Swiss-Prot
Match: MA1B1_HUMAN (Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase OS=Homo sapiens GN=MAN1B1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 5.159e-35
Identity = 89/203 (43.84%), Postives = 117/203 (57.64%), Query Frame = 1
Query:   22 LVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFF-------RDGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIES-GYVGLKDVNTGDKD---NMMQSFFLAETLKYLXLLFS-PTTVISLDEWVFNTEAHPLKIVT 594
            L+R S PS  T++ E        KMD L CF PG +ALG     P      + LA+EL  TCY   +   T L+ E   F       R   ++      N+LRPETVESLFYL+R+TG++ Y++WGW I Q+F + +R+ S GY  + +V    K    + M+SFFL ETLKYL LLFS    ++SLD +VFNTEAHPL I T
Sbjct:  498 LLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTLALGVYHGLPASH---MELAQELMETCYQMNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGYSSINNVQDPQKPEPRDKMESFFLGETLKYLFLLFSDDPNLLSLDAYVFNTEAHPLPIWT 697          
BLAST of CX286936 vs. ExPASy Swiss-Prot
Match: MNS1_CANAL (Mannosyl-oligosaccharide 1,2-alpha-mannosidase OS=Candida albicans GN=MNS1 PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.930e-30
Identity = 93/219 (42.47%), Postives = 115/219 (52.51%), Query Frame = 1
Query:   22 LVRRSTPSSFTYICEKN---GDSLIDKMDELACFAPGMIALGSSG-----------YGPGDSEKFLSLAEELAWTCYNFYQS-TPTKLAGENYFFRDGQDMSVG------TSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEK-----NSRIESGYVGLKDVNTGD-------KDNMMQSFFLAETLKYLXLLFSPTTVISLDEWVFNTEAHP 579
            LV  S PS  T+I E +   G  L  KMD L CF  G++ALG++G               + E    L EEL +TCY  Y   +PT L+ E   F +    S           N+ RPETVESLFYL+RLTG+  Y+E G+ IFQ F K     NS  E  +  L DV + D       KDN  +SF+ AETLKYL LLF  T  I L ++VFNTEAHP
Sbjct:  288 LVSDSYPSGLTFIGELDNGIGGKLSTKMDHLVCFYGGLLALGATGGLTLNEAQSLKSWNEEREADFKLGEELTYTCYKMYHDVSPTGLSPEIVVFNEDTSKSKDFIIKPLDRHNLQRPETVESLFYLYRLTGDVKYREMGYEIFQNFIKYTKVVNSEGEVSFSSLSDVTSFDSNGLPKFKDN-TESFWWAETLKYLYLLFDDTNKIPLTDYVFNTEAHP 505          
BLAST of CX286936 vs. ExPASy Swiss-Prot
Match: YKU1_SCHPO (Putative mannosyl-oligosaccharide 1,2-alpha-mannosidase OS=Schizosaccharomyces pombe GN=SPAC2E1P5.01c PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.480e-29
Identity = 86/219 (39.27%), Postives = 119/219 (54.34%), Query Frame = 1
Query:    4 VPGLLS-LVRRSTPSSFTYICEKNGD---SLIDKMDELACFAPGMIALG------------SSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQDMSVGTS-----WNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRI--ESGYVGLKDVNT---GDKDNMMQSFFLAETLKYLXLLFSPT-TVISLDEWVFNTEAHP 579
            V G++  L+  +TP+ F YI E  G    + + KMD L CF PG +  G            S  +G    E+ + LA+EL  TCY  Y  T T LA E  FF   Q  +   S      N++RPETVESLF L+R+T ++ Y+EWGWNIF +F + SR+     +  L  V +    D+ +  +SF+ AETLKYL LLF    +++ L  + FNTEAHP
Sbjct:  291 VDGIIEYLLNYTTPNHFAYIAELPGGLEHAQLPKMDHLVCFLPGTLMWGATNGTSLEAARTSKNWGTRQ-ERDVKLAQELMRTCYEMYNMTATGLAPEIVFFDVDQTKNEIYSKRRDQHNLMRPETVESLFILYRITRDEIYREWGWNIFVSFLRYSRLPGRDAFTCLDSVESKKVKDQRDKTESFWFAETLKYLYLLFEDDFSILPLTNYTFNTEAHP 508          
BLAST of CX286936 vs. ExPASy Swiss-Prot
Match: MNS1_YEAST (Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase OS=Saccharomyces cerevisiae GN=MNS1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.248e-22
Identity = 82/230 (35.65%), Postives = 117/230 (50.87%), Query Frame = 1
Query:   22 LVRRSTPSSFTYICEKNGD---SLIDKMDELACFAPGMIALGSS-GYGPGDSEK----FLSLAEELAW--------TCYNFYQSTPTKLAGENYFFRDG---QD----MSVGTSW-------NILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESG------YVGLKDVNT--GDKDNMMQSFFLAETLKYLXLLFSPTTVISLDEWVFNTEAHPLKIVTQ 597
            L+ +S PSS  YI E+       L  KMD L CF  G++A GS+ G    ++ +     LSL  +  W        TCY  Y+ + + LA E   F DG   QD     SVG  +       N+ RPETVES+ +++ L+ +  Y+EWG  I  +F +N+ ++        +  L D  T    K N M+SF+LAETLKYL +LF       L + VFNTEAHP  ++ +
Sbjct:  308 LLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILF--LDEFDLTKVVFNTEAHPFPVLDE 535          
BLAST of CX286936 vs. ExPASy Swiss-Prot
Match: MAN12_PENCI (Mannosyl-oligosaccharide alpha-1,2-mannosidase OS=Penicillium citrinum GN=MSDC PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.572e-18
Identity = 56/182 (30.77%), Postives = 85/182 (46.70%), Query Frame = 1
Query:  103 LACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYF------------FRDGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNT---GDKDNMMQSFFLAETLKYLXLLFSPTTVISLDE-----WVFNTEAHPLKI 588
            L CF  G   LG +     D + F+    EL   C   Y ST TK+  +++             F +     + +   +LRPE +ES +Y  R+TG + Y++W WN F A     R +SG+  + DVN    G K +  +SF  AE +KY  L  S      + +     +V+NTEAHP+ +
Sbjct:  330 LTCFDGGSFLLGGTVL---DRQDFIDFGLELVDGCEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAINSTCRTDSGFAAVSDVNKANGGSKYDNQESFLFAEVMKYSYLAHSEDAAWQVQKGGKNTFVYNTEAHPISV 508          
BLAST of CX286936 vs. ExPASy Swiss-Prot
Match: EDEM2_HUMAN (ER degradation-enhancing alpha-mannosidase-like 2 OS=Homo sapiens GN=EDEM2 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 1
Query:  304 LRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNTGDKDNMMQSFFLAETLKYLXLLFSPTT-------------------VISLDEWVFNTEAHPL 582
            LRPE +ES  YL+R TG+ T  E G +  ++ EK S++E G+  +KD+     DN M+SFFLAET+KYL LLF PT                    ++    ++FNTEAHP+
Sbjct:  369 LRPELIESAMYLYRATGDPTLLELGRDAVESIEKISKVECGFATIKDLRDHKLDNRMESFFLAETVKYLYLLFDPTNFIHNNGSTFDAVITPYGECILGAGGYIFNTEAHPI 480          
BLAST of CX286936 vs. ExPASy Swiss-Prot
Match: EDEM3_XENLA (ER degradation-enhancing alpha-mannosidase-like 3 OS=Xenopus laevis GN=edem3 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.561e-15
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 1
Query:  274 DMSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNTGDKDNMMQSFFLAETLKYLXLLFS--PTTVISLDEWVFNTEAH--PLKIVT 594
            D  V  + + LRPE  ES ++L++ TG+  Y E G  +     K +R+  G+  +KDV TG  ++ M SFFLAE  KYL LLFS     +  +++++F TEAH  PL + T
Sbjct:  378 DFRVHWAQHPLRPEFAESTYFLYKATGDPYYLEVGKTLIDNLNKYARVPCGFAAVKDVRTGSHEDRMDSFFLAEMFKYLYLLFSEREDLIFDIEDYIFTTEAHLLPLSLST 488          
BLAST of CX286936 vs. ExPASy Swiss-Prot
Match: EDEM3_MOUSE (ER degradation-enhancing alpha-mannosidase-like 3 OS=Mus musculus GN=Edem3 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.038e-15
Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 1
Query:  274 DMSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNTGDKDNMMQSFFLAETLKYLXLLFS--PTTVISLDEWVFNTEAHPLKI 588
            D  V  + + LRPE  ES ++L++ TG+  Y E G  + +   K +R+  G+  +KDV TG  ++ M SFFLAE  KYL LLF+     +  +++++F TEAH L +
Sbjct:  393 DFRVHWAQHPLRPEFAESTYFLYKATGDPYYLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFADKEDIIFDIEDYIFTTEAHLLPL 499          
BLAST of CX286936 vs. ExPASy Swiss-Prot
Match: EDEM3_HUMAN (ER degradation-enhancing alpha-mannosidase-like 3 OS=Homo sapiens GN=EDEM3 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.038e-15
Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 1
Query:  274 DMSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNTGDKDNMMQSFFLAETLKYLXLLFS--PTTVISLDEWVFNTEAHPLKI 588
            D  V  + + LRPE  ES ++L++ TG+  Y E G  + +   K +R+  G+  +KDV TG  ++ M SFFLAE  KYL LLF+     +  +++++F TEAH L +
Sbjct:  392 DFRVHWAQHPLRPEFAESTYFLYKATGDPYYLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFADKEDIIFDIEDYIFTTEAHLLPL 498          
BLAST of CX286936 vs. ExPASy Swiss-Prot
Match: EDEM1_MOUSE (ER degradation-enhancing alpha-mannosidase-like 1 OS=Mus musculus GN=Edem1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12
Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 1
Query:  304 LRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNTGDKDNMMQSFFLAETLKYLXLLFSPTTVI--SLDEWVFNTEAHPLKI 588
            LRPE VES + L++ T N  Y   G +I Q+ EK ++++ GY  L  V    K++ M+SFFL+ET KYL LLF     +  S   ++F TE H + +
Sbjct:  485 LRPELVESTYLLYQATKNPFYLHVGMDILQSLEKYTKVKCGYATLHHVIDKSKEDRMESFFLSETCKYLYLLFDEENPVHKSGTRYMFTTEGHIISV 581          
The following BLAST results are available for this feature:
BLAST of CX286936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MA1B1_HUMAN5.159e-3543.84Endoplasmic reticulum mannosyl-oligosaccharide 1,2... [more]
MNS1_CANAL2.930e-3042.47Mannosyl-oligosaccharide 1,2-alpha-mannosidase OS=... [more]
YKU1_SCHPO2.480e-2939.27Putative mannosyl-oligosaccharide 1,2-alpha-mannos... [more]
MNS1_YEAST2.248e-2235.65Endoplasmic reticulum mannosyl-oligosaccharide 1,2... [more]
MAN12_PENCI2.572e-1830.77Mannosyl-oligosaccharide alpha-1,2-mannosidase OS=... [more]
EDEM2_HUMAN3.715e-1741.07ER degradation-enhancing alpha-mannosidase-like 2 ... [more]
EDEM3_XENLA1.561e-1539.64ER degradation-enhancing alpha-mannosidase-like 3 ... [more]
EDEM3_MOUSE2.038e-1538.32ER degradation-enhancing alpha-mannosidase-like 3 ... [more]
EDEM3_HUMAN2.038e-1538.32ER degradation-enhancing alpha-mannosidase-like 3 ... [more]
EDEM1_MOUSE2.109e-1240.21ER degradation-enhancing alpha-mannosidase-like 1 ... [more]

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Properties
Property NameValue
Genbank descriptionC01002G04Rv Veg1 Citrus clementina cDNA clone C01002G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286936 ID=CX286936; Name=CX286936; organism=Citrus clementina; type=EST; length=624bp
CTCGTGCCGGGTCTATTAAGCTTGGTTAGGAGATCAACACCATCGTCTTT
TACATACATTTGTGAGAAGAATGGGGACTCGCTGATAGACAAGATGGATG
AATTAGCATGCTTCGCTCCTGGAATGATTGCTTTAGGATCTTCTGGTTAT
GGACCCGGTGACTCTGAGAAATTTCTCTCTCTTGCAGAAGAGCTTGCTTG
GACATGTTATAACTTCTACCAGTCAACACCGACAAAATTGGCTGGAGAGA
ATTACTTCTTTCGTGATGGGCAGGACATGTCTGTGGGCACATCATGGAAC
ATACTGAGACCTGAGACTGTTGAATCACTTTTTTACTTGTGGCGTCTAAC
TGGCAACAAGACATACAAAGAGTGGGGTTGGAACATATTTCAGGCATTCG
AAAAGAACTCCCGAATAGAATCAGGATATGTTGGACTGAAAGATGTTAAT
ACTGGCGACAAAGACAACATGATGCAAAGCTTCTTTCTTGCAGAGACACT
GAAATATCTGNATCTTCTTTTCTCTCCCACAACAGTAATCTCATTAGATG
AGTGGGTTTTCAATACAGAAGCCCACCCATTAAAAATTGTGACCCAACGT
GATGGAGAGATCTCTGGGAGATCG
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