CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1189..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BRUO2 (Chaperone protein dnaK OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dnaK PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 6.824e-41
Identity = 80/106 (75.47%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   ++DEV+LVGGMTR+PK+QEVV   FGK P KGVNPDE VA+GAAIQGG+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTI TKKSQ FSTA D
Sbjct:  321 DAGLKAGEIDEVVLVGGMTRMPKIQEVVKAFFGKEPHKGVNPDEVVAMGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BRUME (Chaperone protein dnaK OS=Brucella melitensis GN=dnaK PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 6.824e-41
Identity = 80/106 (75.47%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   ++DEV+LVGGMTR+PK+QEVV   FGK P KGVNPDE VA+GAAIQGG+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTI TKKSQ FSTA D
Sbjct:  321 DAGLKAGEIDEVVLVGGMTRMPKIQEVVKAFFGKEPHKGVNPDEVVAMGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BRUAB (Chaperone protein dnaK OS=Brucella abortus GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.824e-41
Identity = 80/106 (75.47%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   ++DEV+LVGGMTR+PK+QEVV   FGK P KGVNPDE VA+GAAIQGG+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTI TKKSQ FSTA D
Sbjct:  321 DAGLKAGEIDEVVLVGGMTRMPKIQEVVKAFFGKEPHKGVNPDEVVAMGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BARBK (Chaperone protein dnaK OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.824e-41
Identity = 80/106 (75.47%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   ++DEV+LVGGMTR+PK+QEVV   FGK P KGVNPDE VA+GAAIQGG+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTI TKKSQ FSTA D
Sbjct:  321 DAGLRAGEIDEVVLVGGMTRMPKIQEVVQNFFGKDPHKGVNPDEVVAMGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTADD 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_AZOC5 (Chaperone protein dnaK OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.824e-41
Identity = 80/106 (75.47%), Postives = 94/106 (88.68%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++   +DEV+LVGGMTR+PKVQE+V + FGK P KGVNPDE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQVFSTA D
Sbjct:  321 DAGLSAGQIDEVVLVGGMTRMPKVQEMVKQFFGKEPHKGVNPDEVVAIGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_METS4 (Chaperone protein dnaK OS=Methylobacterium sp. (strain 4-46) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 8.912e-41
Identity = 78/106 (73.58%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   ++DEV+LVGGMTR+PK+Q+VV   FGK P KGVNPDE VA+GAA+Q G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQVFSTA D
Sbjct:  321 DAGVAASEIDEVVLVGGMTRMPKIQDVVKTFFGKEPHKGVNPDEVVAIGAAVQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_METPB (Chaperone protein dnaK OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 8.912e-41
Identity = 79/106 (74.53%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++DEV+LVGG TR+PKVQEVV   FGK P KGVNPDE VA+GAA+Q G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQVFSTA D
Sbjct:  321 DAGVSASEIDEVVLVGGQTRMPKVQEVVKAFFGKEPHKGVNPDEVVAIGAAVQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_METEP (Chaperone protein dnaK OS=Methylobacterium extorquens (strain PA1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 8.912e-41
Identity = 79/106 (74.53%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++DEV+LVGG TR+PKVQEVV   FGK P KGVNPDE VA+GAA+Q G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQVFSTA D
Sbjct:  321 DAGVSASEIDEVVLVGGQTRMPKVQEVVKAFFGKEPHKGVNPDEVVAIGAAVQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_METC4 (Chaperone protein dnaK OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 8.912e-41
Identity = 79/106 (74.53%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++DEV+LVGG TR+PKVQEVV   FGK P KGVNPDE VA+GAA+Q G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQVFSTA D
Sbjct:  321 DAGVSASEIDEVVLVGGQTRMPKVQEVVKAFFGKEPHKGVNPDEVVAIGAAVQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_MESSB (Chaperone protein dnaK OS=Mesorhizobium sp. (strain BNC1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 8.912e-41
Identity = 80/106 (75.47%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++DEV+LVGGMTR+PKVQE V   FGK P KGVNPDE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQVFSTA D
Sbjct:  321 DAGLSAGEIDEVVLVGGMTRMPKVQETVKNFFGKEPHKGVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAED 426
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BRUO26.824e-4175.47Chaperone protein dnaK OS=Brucella ovis (strain AT... [more]
DNAK_BRUME6.824e-4175.47Chaperone protein dnaK OS=Brucella melitensis GN=d... [more]
DNAK_BRUAB6.824e-4175.47Chaperone protein dnaK OS=Brucella abortus GN=dnaK... [more]
DNAK_BARBK6.824e-4175.47Chaperone protein dnaK OS=Bartonella bacilliformis... [more]
DNAK_AZOC56.824e-4175.47Chaperone protein dnaK OS=Azorhizobium caulinodans... [more]
DNAK_METS48.912e-4173.58Chaperone protein dnaK OS=Methylobacterium sp. (st... [more]
DNAK_METPB8.912e-4174.53Chaperone protein dnaK OS=Methylobacterium populi ... [more]
DNAK_METEP8.912e-4174.53Chaperone protein dnaK OS=Methylobacterium extorqu... [more]
DNAK_METC48.912e-4174.53Chaperone protein dnaK OS=Methylobacterium chlorom... [more]
DNAK_MESSB8.912e-4175.47Chaperone protein dnaK OS=Mesorhizobium sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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