CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1189..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_ROSDO (Chaperone protein dnaK OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dnaK PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.423e-40
Identity = 77/106 (72.64%), Postives = 94/106 (88.68%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+DE++LVGGMTR+PKV E V++ FGK P KGVNPDE VA+GAAIQ G+L+GDVK+++LLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQ+FSTA D
Sbjct:  321 DAGLSASDIDEIVLVGGMTRMPKVVEEVTKFFGKEPHKGVNPDEVVAMGAAIQAGVLQGDVKDVVLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQIFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_MARMM (Chaperone protein dnaK OS=Maricaulis maris (strain MCS10) GN=dnaK PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.423e-40
Identity = 78/106 (73.58%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+++LVGGMTR+PKVQE V   FGK P KGVNPDE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQ FSTA D
Sbjct:  321 DAGLSPSDIDDIVLVGGMTRMPKVQEAVKGFFGKDPHKGVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQTFSTADD 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_TREDE (Chaperone protein dnaK OS=Treponema denticola GN=dnaK PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 5.777e-40
Identity = 80/106 (75.47%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA IT   +D++LLVGG TR+PKV +++ EIFGK  SK VNPDEAVA+GAAIQGGIL GDVK++LLLDVTPLSLGIET+GG+FT LINRNTTI T+KSQVFSTAAD
Sbjct:  320 DAGITPDKIDDILLVGGSTRMPKVLQIIKEIFGKEGSKSVNPDEAVAMGAAIQGGILGGDVKDVLLLDVTPLSLGIETMGGVFTPLINRNTTIPTRKSQVFSTAAD 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_ZYMMO (Chaperone protein dnaK OS=Zymomonas mobilis GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 9.853e-40
Identity = 76/106 (71.70%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+D+V++VGGMTR+PKV++VV E FGK P  GVNPDE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTR+I+RNTTI TKKSQV+STA D
Sbjct:  321 DAGVKASDIDDVVMVGGMTRMPKVRQVVKEFFGKEPHTGVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRMIDRNTTIPTKKSQVYSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_PELCD (Chaperone protein dnaK OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 9.853e-40
Identity = 79/106 (74.53%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  DVDEVLLVGGMTR+P VQ  V EIFGK+P+KGVNPDE VA+GAAIQGG+L+G+VK++LLLDVTPLSLGIETLG I T+LI +NTTI  KKSQ+FSTAAD
Sbjct:  321 DAGLSASDVDEVLLVGGMTRMPAVQAKVQEIFGKTPNKGVNPDEVVAIGAAIQGGVLKGEVKDVLLLDVTPLSLGIETLGSIMTKLIEKNTTIPCKKSQIFSTAAD 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_GLUOX (Chaperone protein dnaK OS=Gluconobacter oxydans GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 9.853e-40
Identity = 76/106 (71.70%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  ++DEV+LVGGMTR+PKV E V E FGK P++ VNPDE VA+GAA+QG +L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQ FSTA D
Sbjct:  321 DASVSANEIDEVILVGGMTRMPKVIETVKEFFGKDPARNVNPDEVVAIGAAVQGAVLKGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQTFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_DESAA (Chaperone protein dnaK OS=Desulfatibacillum alkenivorans (strain AK-01) GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 9.853e-40
Identity = 79/106 (74.53%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  +VDEV+LVGGMTR+P VQE V +IFGK P KGVNPDE VA+GA IQGG+L GDVK++LLLDVTPLSLGIETLGG+ T+LI +NTTI TKKSQVFSTAAD
Sbjct:  321 DAGMSASEVDEVILVGGMTRMPAVQERVKKIFGKEPHKGVNPDEVVAIGAGIQGGVLMGDVKDVLLLDVTPLSLGIETLGGVMTKLIEKNTTIPTKKSQVFSTAAD 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_RHOCS (Chaperone protein dnaK OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.287e-39
Identity = 76/106 (71.70%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   ++DEV+LVGGMTR+PK+ E V + FG+ P +GVNPDE VA+GAAIQGG+L+G+VK++LLLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQVFSTA D
Sbjct:  321 DAGLKASEIDEVILVGGMTRMPKIIETVKQFFGREPHRGVNPDEVVAVGAAIQGGVLKGEVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_PARDP (Chaperone protein dnaK OS=Paracoccus denitrificans (strain Pd 1222) GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.287e-39
Identity = 78/106 (73.58%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+DE++LVGGMTR+PKV E V+  FGK P KGVNPDE VALGAAIQ G+L+GDVK+++LLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQ+FSTA D
Sbjct:  322 DAGMSKGDIDEIVLVGGMTRMPKVVEEVTAFFGKEPHKGVNPDEVVALGAAIQAGVLQGDVKDVVLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQIFSTAED 427
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_EHRRW (Chaperone protein dnaK OS=Ehrlichia ruminantium (strain Welgevonden) GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.287e-39
Identity = 80/106 (75.47%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA I+   +DEV+LVGGMTRVPK+ + V E FGK P KGVNPDE VA+GAAIQGGIL GDV+++LLLDVTPLSLGIETLGG+FT LI RNTTI TKKSQVFSTA D
Sbjct:  324 DAGISADKIDEVVLVGGMTRVPKIIQTVKEFFGKEPHKGVNPDEVVAIGAAIQGGILAGDVRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAED 429
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_ROSDO4.423e-4072.64Chaperone protein dnaK OS=Roseobacter denitrifican... [more]
DNAK_MARMM4.423e-4073.58Chaperone protein dnaK OS=Maricaulis maris (strain... [more]
DNAK_TREDE5.777e-4075.47Chaperone protein dnaK OS=Treponema denticola GN=d... [more]
DNAK_ZYMMO9.853e-4071.70Chaperone protein dnaK OS=Zymomonas mobilis GN=dna... [more]
DNAK_PELCD9.853e-4074.53Chaperone protein dnaK OS=Pelobacter carbinolicus ... [more]
DNAK_GLUOX9.853e-4071.70Chaperone protein dnaK OS=Gluconobacter oxydans GN... [more]
DNAK_DESAA9.853e-4074.53Chaperone protein dnaK OS=Desulfatibacillum alkeni... [more]
DNAK_RHOCS1.287e-3971.70Chaperone protein dnaK OS=Rhodospirillum centenum ... [more]
DNAK_PARDP1.287e-3973.58Chaperone protein dnaK OS=Paracoccus denitrificans... [more]
DNAK_EHRRW1.287e-3975.47Chaperone protein dnaK OS=Ehrlichia ruminantium (s... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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