CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1189..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SULMW (Chaperone protein dnaK OS=Sulcia muelleri (strain GWSS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.744e-39
Identity = 75/105 (71.43%), Postives = 93/105 (88.57%), Query Frame = 1
Query:    4 ANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            +N+ +KD+DEV+LVGG TR+PK+QE V + F K PSKGVNPDE V++GAAIQGG+L GDVK++LLLDVTPLSLGIETLGG+FT+LI+ NTTI TKKS++FSTA D
Sbjct:  321 SNLISKDIDEVILVGGSTRIPKIQEQVEKFFEKIPSKGVNPDEVVSIGAAIQGGVLSGDVKDVLLLDVTPLSLGIETLGGVFTKLIDSNTTIPTKKSEIFSTATD 425          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LAWIP (Chaperone protein dnaK OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.744e-39
Identity = 76/106 (71.70%), Postives = 94/106 (88.68%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA + T ++DEV+LVGGMTR+P VQ+ V+E FGK P++ VNPDE VA+GAAIQGGIL GDVK++LLLDVTPLSLGIET+GG+FT+LI+RNTTI T+KSQ F+TAAD
Sbjct:  320 DAGLQTSNIDEVILVGGMTRMPLVQKKVAEFFGKEPNRSVNPDEVVAMGAAIQGGILAGDVKDVLLLDVTPLSLGIETMGGVFTKLIDRNTTIPTRKSQTFTTAAD 425          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_HYPNA (Chaperone protein dnaK OS=Hyphomonas neptunium (strain ATCC 15444) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.744e-39
Identity = 79/106 (74.53%), Postives = 90/106 (84.91%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA  T   +DEV+LVGGMTR+P VQE V + F + P KGVNPDE VA+GAAIQGG+L+GDVK+++LLDVTPLSLGIETLGGIFTRLI RNTTI TKKSQVFSTA D
Sbjct:  321 DAGKTPAQIDEVVLVGGMTRMPAVQEAVKKFFNREPHKGVNPDEVVAIGAAIQGGVLQGDVKDVVLLDVTPLSLGIETLGGIFTRLIERNTTIPTKKSQVFSTAED 426          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSM (Chaperone protein dnaK OS=Geobacter sp. (strain M21) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.744e-39
Identity = 76/106 (71.70%), Postives = 95/106 (89.62%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+DEV+LVGGMTR+P VQ+ V +IFGK P++GVNPDE VA+GAAIQGG+LRGDVK++LLLDVTPLSLGIETLGG+ T+LI++N+TI  +KSQVFSTAAD
Sbjct:  321 DAGLSASDIDEVILVGGMTRMPIVQKKVQDIFGKVPNRGVNPDEVVAIGAAIQGGVLRGDVKDVLLLDVTPLSLGIETLGGVLTKLIDKNSTIPCRKSQVFSTAAD 426          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_GEOBB (Chaperone protein dnaK OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.744e-39
Identity = 76/106 (71.70%), Postives = 95/106 (89.62%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+DEV+LVGGMTR+P VQ+ V +IFGK P++GVNPDE VA+GAAIQGG+LRGDVK++LLLDVTPLSLGIETLGG+ T+LI++N+TI  +KSQVFSTAAD
Sbjct:  321 DAGLSASDIDEVILVGGMTRMPIVQKKVQDIFGKLPNRGVNPDEVVAIGAAIQGGVLRGDVKDVLLLDVTPLSLGIETLGGVLTKLIDKNSTIPCRKSQVFSTAAD 426          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_DESMR (Chaperone protein dnaK OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.744e-39
Identity = 77/106 (72.64%), Postives = 91/106 (85.85%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+DEV+LVGGMTR+P V + V E FGK P++ VNPDE VA+GAAIQGGIL GDVK++LLLDVTPLSLGIETLGG+FT+LI RNTTI T+KSQVF+TAAD
Sbjct:  319 DAGLKASDIDEVVLVGGMTRMPLVSKTVQEFFGKEPNRSVNPDEVVAMGAAIQGGILAGDVKDVLLLDVTPLSLGIETLGGVFTKLIERNTTIPTRKSQVFTTAAD 424          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BORGA (Chaperone protein dnaK OS=Borrelia garinii GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.744e-39
Identity = 75/106 (70.75%), Postives = 93/106 (87.74%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+P +Q++V +IFG+ P+KGVNPDEAVA+GAAIQGGIL G+ K+++LLDVTPLSLGIETLGG+ T+LI RNTTI TKKSQVFSTAAD
Sbjct:  321 DAGLKASDINEVILVGGSTRIPAIQKIVKDIFGQDPNKGVNPDEAVAIGAAIQGGILTGETKDMVLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAAD 426          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BORBZ (Chaperone protein dnaK OS=Borrelia burgdorferi (strain ZS7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.744e-39
Identity = 75/106 (70.75%), Postives = 93/106 (87.74%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+P +Q++V +IFG+ P+KGVNPDEAVA+GAAIQGGIL G+ K+++LLDVTPLSLGIETLGG+ T+LI RNTTI TKKSQVFSTAAD
Sbjct:  321 DAGLKASDINEVILVGGSTRIPAIQKIVKDIFGQDPNKGVNPDEAVAIGAAIQGGILTGETKDMVLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAAD 426          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BORBU (Chaperone protein dnaK OS=Borrelia burgdorferi GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.744e-39
Identity = 75/106 (70.75%), Postives = 93/106 (87.74%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+P +Q++V +IFG+ P+KGVNPDEAVA+GAAIQGGIL G+ K+++LLDVTPLSLGIETLGG+ T+LI RNTTI TKKSQVFSTAAD
Sbjct:  321 DAGLKASDINEVILVGGSTRIPAIQKIVKDIFGQDPNKGVNPDEAVAIGAAIQGGILTGETKDMVLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAAD 426          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BORAP (Chaperone protein dnaK OS=Borrelia afzelii (strain PKo) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.744e-39
Identity = 75/106 (70.75%), Postives = 93/106 (87.74%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+P +Q++V +IFG+ P+KGVNPDEAVA+GAAIQGGIL G+ K+++LLDVTPLSLGIETLGG+ T+LI RNTTI TKKSQVFSTAAD
Sbjct:  321 DAGLKASDINEVILVGGSTRIPAIQKIVKDIFGQDPNKGVNPDEAVAIGAAIQGGILTGETKDMVLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAAD 426          
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SULMW3.744e-3971.43Chaperone protein dnaK OS=Sulcia muelleri (strain ... [more]
DNAK_LAWIP3.744e-3971.70Chaperone protein dnaK OS=Lawsonia intracellularis... [more]
DNAK_HYPNA3.744e-3974.53Chaperone protein dnaK OS=Hyphomonas neptunium (st... [more]
DNAK_GEOSM3.744e-3971.70Chaperone protein dnaK OS=Geobacter sp. (strain M2... [more]
DNAK_GEOBB3.744e-3971.70Chaperone protein dnaK OS=Geobacter bemidjiensis (... [more]
DNAK_DESMR3.744e-3972.64Chaperone protein dnaK OS=Desulfovibrio magneticus... [more]
DNAK_BORGA3.744e-3970.75Chaperone protein dnaK OS=Borrelia garinii GN=dnaK... [more]
DNAK_BORBZ3.744e-3970.75Chaperone protein dnaK OS=Borrelia burgdorferi (st... [more]
DNAK_BORBU3.744e-3970.75Chaperone protein dnaK OS=Borrelia burgdorferi GN=... [more]
DNAK_BORAP3.744e-3970.75Chaperone protein dnaK OS=Borrelia afzelii (strain... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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