CX287068

Overview
NameCX287068
Unique NameCX287068
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5982 contig Ccv1_Contig5982:297..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: C16B1_PICSI (Cytochrome P450 716B1 OS=Picea sitchensis GN=CYP716B1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.211e-16
Identity = 48/150 (32.00%), Postives = 78/150 (52.00%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHM-DSW--TDRVLLMEEAKKITFELTVKQLMSFDPNE 554
            ETL+ +   +  NP  F D R +++G++FTT + G PTV    PE NRF+  NE KL   S+P S+ NL  + SL+   G   KR+  + M+F     +R+  +  +D + + H+ + W   D V+ +   K+ TF L      S +  +
Sbjct:   63 ETLEFLGCQRKGNPRDFFDSRTQKYGNVFTTSLVGHPTVVFCSPEGNRFLFSNENKLVVNSWPSSVGNLF-RSSLITTVGDDAKRLRRILMTFLRPEALRE-FVGRVDSMTKRHLAEHWIGKDEVMALPLLKRYTFSLACDLFASINTKD 210          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: C85A1_ARATH (Cytochrome P450 85A1 OS=Arabidopsis thaliana GN=CYP85A1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.697e-16
Identity = 40/119 (33.61%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  183 RFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR--VLLMEEAKKITFELTVKQL 533
            R+GS F +H+ G PT+ S D E NR+IL+NE K     YP S+ ++LG  ++  + GS H+ M    +S  +S+++RDH+L  +D  +R ++D W +   + + ++ K + F  ++ Q+
Sbjct:   64 RYGSFFKSHLLGCPTLISMDSEVNRYILKNESKGLVPGYPQSMLDILGTCNMAAVHGSSHRLMRGSLLSLISSTMMRDHILPKVDHFMRSYLDQWNELEVIDIQDKTKHMAFLSSLTQI 182          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: C16B2_PICSI (Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP716B2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.523e-16
Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHM-DSW--TDRVLLMEEAKKITFEL 518
            ETL+ +   +  NP  F D R +++G++FTT + G PTV    PE NRF+  NE KL   S+P S+ NL  + SL+   G   KR+  + M+F     +R+  +  +D + + H+ + W   D V  +   K+ TF L
Sbjct:   63 ETLEFLGCQRKGNPRDFFDSRTQKYGNVFTTSLVGHPTVVFCSPEGNRFLFSNENKLVVNSWPSSVGNLF-RSSLITTVGDDAKRLRRILMTFLRPEALRE-FVGRVDSMTKRHLAEHWIGKDEVTALPLLKRYTFSL 198          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: C85A1_ORYSJ (Cytochrome P450 85A1 OS=Oryza sativa subsp. japonica GN=CYP85A1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.025e-15
Identity = 44/144 (30.56%), Postives = 78/144 (54.17%), Query Frame = 3
Query:  162 FIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-----VLLMEEAKKITFELTVKQLMSFDPNEWTESLRKE 578
            F+  R  R+GS+F THI G PTV   + E NR  L +EG+ F   YP S+ ++LG++++  ++G LH+ M    +S    ++IR  LL  ID  +R H+ +W+       V +  + K++     ++Q+        +++L+ E
Sbjct:   57 FMKARRLRYGSVFRTHILGCPTVVCMEAELNRRALASEGRGFVPGYPQSMLDILGRNNIAAVQGPLHRAMRGAMLSLVRPAMIRSSLLPKIDAFMRSHLAAWSSSSSSAVVDIQAKTKEMALLSALRQIAGVSAGPLSDALKAE 200          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: C85A2_ARATH (Cytochrome P450 85A2 OS=Arabidopsis thaliana GN=CYP85A2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.748e-15
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 3
Query:  183 RFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD--RVLLMEEAKKITFELTVKQLMSFDPNEWTESLRKEY 581
            R+GS F +HI G PT+ S D E NR+IL NE K     YP S+ ++LG  ++  + G  H+ M    +S  + ++++DHLL  ID  +R ++  W D   V + E+ K + F  ++ Q+         E  R E+
Sbjct:   64 RYGSFFKSHILGCPTIVSMDAELNRYILMNESKGLVAGYPQSMLDILGTCNIAAVHGPSHRLMRGSLLSLISPTMMKDHLLPKIDDFMRNYLCGWDDLETVDIQEKTKHMAFLSSLLQIAETLKKPEVEEYRTEF 198          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: ABAH4_ARATH (Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thaliana GN=CYP707A4 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.895e-15
Identity = 50/158 (31.65%), Postives = 75/158 (47.47%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR--VLLMEEAKKITFELTVKQLMSFDPNEWTESLRKEY 581
            ETLQL +    +NP  F   + KR+G IF T I G P V  A PE  RF+L     +F+ +YP S   L+G  +L   +G  H  +  L  S      IR  L+ DI+ +    + SW +   V   +E KK  F++ +  +     + + E L+  Y
Sbjct:   46 ETLQLYS----QNPNVFFTSKQKRYGEIFKTRILGYPCVMLASPEAARFVLVTHAHMFKPTYPRSKEKLIGPSALFFHQGDYHSHIRKLVQSSFYPETIR-KLIPDIEHIALSSLQSWANMPIVSTYQEMKKFAFDVGILAIFGHLESSYKEILKHNY 198          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: C85A3_SOLLC (Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CYP85A3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.087e-15
Identity = 41/122 (33.61%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  183 RFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSW--TDRVLLMEEAKKITFELTVKQLMSF 542
            R+G+ F +HI G PTV S D   N +IL NE K     YP S+ ++LGK ++  + G+ HK +    +S  N ++I+DH+L  ID+ +R H+  W   + + + +  K++ F  ++ Q+  F
Sbjct:   64 RYGNFFKSHILGCPTVVSMDAGLNVYILNNEAKGLIPGYPQSMLDILGKCNIAAVHGATHKYIRGALLSLINPTMIKDHILPKIDKFMRSHLSGWDNCNVIDIQQMTKEMAFFSSLDQIGGF 185          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: ABAH1_ARATH (Abscisic acid 8'-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP707A1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.525e-14
Identity = 44/157 (28.03%), Postives = 81/157 (51.59%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVL-LMEEAKKITFELTVKQLMSFDPNEWTESLRKEY 581
            ET QL +    ++P  F   + KR+GS+F TH+ G P V  + PE  +F+L  +  LF+ ++P S   +LGK ++   +G  H ++  L +       IR +++ DI+ + +  + SW   ++   +E K  TF + +  +   D   + E L++ Y
Sbjct:   48 ETFQLYS----QDPNVFFQSKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPESIR-NMVPDIESIAQDSLRSWEGTMINTYQEMKTYTFNVALLSIFGKDEVLYREDLKRCY 199          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: ABAH3_ARATH (Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thaliana GN=CYP707A3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.624e-14
Identity = 43/157 (27.39%), Postives = 81/157 (51.59%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVL-LMEEAKKITFELTVKQLMSFDPNEWTESLRKEY 581
            ET QL +    ++P  F   + +R+GS+F TH+ G P V  + PE  +F+L  +  LF+ ++P S   +LGK ++   +G  H ++  L +       IR +++  I+ + +  ++SW    L   +E K  TF + +  ++  D   + E L++ Y
Sbjct:   48 ETFQLYS----QDPNVFFAAKQRRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKERMLGKQAIFFHQGDYHSKLRKLVLRAFMPDAIR-NMVPHIESIAQESLNSWDGTQLNTYQEMKTYTFNVALISILGKDEVYYREDLKRCY 199          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: T10H_TAXCU (Taxane 10-beta-hydroxylase OS=Taxus cuspidata GN=CYP725A1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.345e-14
Identity = 41/149 (27.52%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSW--TDRVLLMEEAKKITFELTVKQLMSFDPNE 554
            ET+QL+   ++E P+ F D R+K+FG ++ T + G PTV    P  N+ +L NE KL E   P S   L+G+ S++  +G  H+ + +    F  +  ++++L      +     + W   D V ++   + + F  ++   + FD N+
Sbjct:   62 ETIQLLRTLRSETPQKFFDDRLKKFGPVYMTSLIGHPTVVLCGPAGNKLVLSNEDKLVEMEGPKSFMKLIGEDSIVAKRGEDHRILRTALARFLGAQALQNYLGRMSSEIGHHFNEKWKGKDEVKVLPLVRGLIF--SIASTLFFDVND 208          
The following BLAST results are available for this feature:
BLAST of CX287068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
C16B1_PICSI1.211e-1632.00Cytochrome P450 716B1 OS=Picea sitchensis GN=CYP71... [more]
C85A1_ARATH2.697e-1633.61Cytochrome P450 85A1 OS=Arabidopsis thaliana GN=CY... [more]
C16B2_PICSI3.523e-1634.06Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP71... [more]
C85A1_ORYSJ1.025e-1530.56Cytochrome P450 85A1 OS=Oryza sativa subsp. japoni... [more]
C85A2_ARATH1.748e-1533.33Cytochrome P450 85A2 OS=Arabidopsis thaliana GN=CY... [more]
ABAH4_ARATH3.895e-1531.65Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thal... [more]
C85A3_SOLLC5.087e-1533.61Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CY... [more]
ABAH1_ARATH2.525e-1428.03Abscisic acid 8'-hydroxylase 1 OS=Arabidopsis thal... [more]
ABAH3_ARATH5.624e-1427.39Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thal... [more]
T10H_TAXCU7.345e-1427.52Taxane 10-beta-hydroxylase OS=Taxus cuspidata GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC01004C11SK Veg1 Citrus clementina cDNA clone C01004C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287068 ID=CX287068; Name=CX287068; organism=Citrus clementina; type=EST; length=581bp
ATGATCTCGTTCTTTATATTTCCATTTCCACAGTCATTTTCTTTATTATA
AAAAGGTCCCGGAGCCGGCGGCTGCGGTTGCCGCCGGGAAGCCTCGGCCT
GCCCTTTCTTGGGGAGACCTTGCAACTCATAGCCGCATACAAAACTGAGA
ACCCGGAGCCCTTCATTGACGTGAGGGTGAAGCGGTTCGGTTCGATATTC
ACAACCCACATATTTGGCGAGCCGACGGTGTTCTCCGCCGACCCGGAAAC
GAACCGGTTCATCTTGCAGAATGAAGGGAAGTTGTTCGAGTGCAGCTACC
CCGGCTCGATATCGAACCTTCTGGGGAAGCACTCGTTGCTGCTGATGAAG
GGGAGTCTTCATAAGAGAATGCATTCTTTAACCATGAGCTTCGCTAATTC
GTCGATCATTAGAGACCATCTTTTGGTCGACATAGACCGGCTGGTCCGGC
TCCATATGGATTCCTGGACCGACCGGGTCCTTCTCATGGAAGAAGCCAAG
AAGATAACATTTGAGTTAACAGTGAAGCAGCTGATGAGTTTTGATCCGAA
TGAATGGACCGAGAGTCTCAGAAAAGAATAC
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