CX287073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.902e-14 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 191 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.902e-14 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 191 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.902e-14 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 191 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.902e-14 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 189 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.902e-14 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 190 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.096e-14 Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 YLGGS DP G D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHL DPVNNN Sbjct: 188 YLGGSFDPL----------GLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNN 252
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.096e-14 Identity = 47/107 (43.93%), Postives = 60/107 (56.07%), Query Frame = -1 Query: 228 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 548 ++ LMG E R A G +G L Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 165 QVILMGAVEGYRV---AGNGPLGEAEDL---LYPGGSFDPL----------GLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.096e-14 Identity = 47/107 (43.93%), Postives = 60/107 (56.07%), Query Frame = -1 Query: 228 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 548 ++ LMG E R A G +G L Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 165 QVILMGAVEGYRV---AGNGPLGEAEDL---LYPGGSFDPL----------GLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.656e-14 Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 191 YPGGSFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.656e-14 Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPVNNN Sbjct: 191 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 255 The following BLAST results are available for this feature:
BLAST of CX287073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287073 ID=CX287073; Name=CX287073; organism=Citrus clementina; type=EST; length=554bpback to top |