CX287073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.141e-12 Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN Sbjct: 188 YPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANN 252
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP + ++ + K+KE+KNGRLAM ++ G+FV +VTG GP +NL DHLADPVNNN Sbjct: 152 YPGGSFDPL----------GLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNN 216
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.770e-12 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = -1 Query: 228 DEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 383 D + + K+KE+KNGRLAM A LG+FVQ +VTG GP +NL DHLA+P NN Sbjct: 211 DPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENN 262
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.770e-12 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = -1 Query: 228 GSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 443 G G+ Y D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NLLDHL +PV NN Sbjct: 182 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.770e-12 Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADP NN Sbjct: 189 YPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNN 253
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.770e-12 Identity = 33/72 (45.83%), Postives = 43/72 (59.72%), Query Frame = -1 Query: 228 GSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 443 G G+ Y D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHL DPV NN Sbjct: 185 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.230e-12 Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = -1 Query: 216 DEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTS 383 D + + K+KE+KNGRLAM + G+FVQ +VTG GP QNL DHLADP NN + Sbjct: 193 DPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAA 248
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.813e-11 Identity = 43/121 (35.54%), Postives = 57/121 (47.11%), Query Frame = -1 Query: 240 VLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLG----------------GSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADP 554 V+E+ L+G+AE RR+ D PG + K G GSG PA +K+ + KE+KNGRLAMLA++G + Q + TG GP NL HLADP Sbjct: 155 VIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPA-----------------KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.092e-11 Identity = 42/121 (34.71%), Postives = 57/121 (47.11%), Query Frame = -1 Query: 240 VLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLG----------------GSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADP 554 ++E+ L+G+AE RR+ D PG + K G GSG PA +K+ + KE+KNGRLAMLA++G + Q + TG GP NL HLADP Sbjct: 155 IVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPA-----------------KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258 The following BLAST results are available for this feature:
BLAST of CX287073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287073 ID=CX287073; Name=CX287073; organism=Citrus clementina; type=EST; length=554bpback to top |