CX287079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR26_ARATH (Glutamate receptor 2.6 OS=Arabidopsis thaliana GN=GLR2.6 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.167e-20 Identity = 55/142 (38.73%), Postives = 84/142 (59.15%), Query Frame = 2 Query: 74 SYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRC-EFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 SYTA+LTS+LTVQ+L ++ +D LR+S IGYQ SF L + ESRL ++P+E + GG+ A D+ AY +LF++ C +++I+ F +G+GFAFP SPL D+S IL ++E ++ I + Sbjct: 667 SYTATLTSMLTVQELRPTVRHMDDLRNSGVNIGYQTGSFTFERL-KQMGYKESRLKTYDTPQEMHELFLKKSSNGGIDAAFDEVAYVKLFMAKYCSKYTIIEPTFKADGFGFAFPLGSPLVPDLSRQILNITEGETMKAIEN 807
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR22_ARATH (Glutamate receptor 2.2 OS=Arabidopsis thaliana GN=GLR2.2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.167e-20 Identity = 58/134 (43.28%), Postives = 77/134 (57.46%), Query Frame = 2 Query: 74 SYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCE-FSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSEN 472 SYTASL S+LT Q+L+ I + SL +GYQ SF L +E +S LVP ++ EE + LK GP GGVAA Y LFL C + +V + F +G+GF FP SPL D+S AILK++E+ Sbjct: 658 SYTASLASLLTSQQLNPTITSMSSLLHRGETVGYQRTSFILGKL-NETGFPQSSLVPFDTAEECDELLKKGPKNGGVAAAFLGTPYVRLFLGQYCNTYKMVEEPFNVDGFGFVFPIGSPLVADVSRAILKVAES 790
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR23_ARATH (Glutamate receptor 2.3 OS=Arabidopsis thaliana GN=GLR2.3 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 8.234e-20 Identity = 57/134 (42.54%), Postives = 76/134 (56.72%), Query Frame = 2 Query: 74 SYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCE-FSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSEN 472 SYTASL S+LT QKL+ I + SL +GYQ SF L E +S LVP ++ EE + L GP KGGV+ + Y LFL C + +V + F +G+GF FP SPL D+S AILK++E+ Sbjct: 658 SYTASLASLLTSQKLNPTITSMSSLLEKGETVGYQRTSFILGKL-KERGFPQSSLVPFDTAEECDELLSKGPKKGGVSGAFLEIPYLRLFLGQFCNTYKMVEEPFNVDGFGFVFPIGSPLVADVSRAILKVAES 790
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR28_ARATH (Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.075e-19 Identity = 61/167 (36.53%), Postives = 89/167 (53.29%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDE-FNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRC-EFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 EK VS L R SYTA+LTS LTVQ+ + L + +GYQ +F +++L+ E FN+ S+L P S EE L +G ++A D+ AY LS C +++IV F G+GFAFPR+SPL D+S AIL +++ ++Q I + Sbjct: 631 EKVVSNLARFVVVVWCFVVLVLTQSYTANLTSFLTVQRFQPAAINVKDLIKNGDYVGYQHGAFVKDFLIKEGFNV--SKLKPFGSSEECHALLSNG----SISAAFDEVAYLRAILSQYCSKYAIVEPTFKTAGFGFAFPRNSPLTGDVSKAILNVTQGDEMQHIEN 791
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR29_ARATH (Glutamate receptor 2.9 OS=Arabidopsis thaliana GN=GLR2.9 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.396e-19 Identity = 60/166 (36.14%), Postives = 86/166 (51.81%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRC-EFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 E VS L R SYTASLTS LTVQ L + ++ L + +GYQ +F ++ L+ E +L P +S ++ L G KG +AA D+ AY + LS C ++ +V F G+GFAFP++SPL + S AIL L++N Q+I D Sbjct: 620 ENVVSNLARFVVVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTNVNDLIKNRDCVGYQGGAFVKDILLG-LGFHEDQLKPFDSAKDADDLLSKGKSKG-IAAAFDEVAYLKAILSQSCSKYVMVEPTFKTGGFGFAFPKNSPLTGEFSRAILNLTQNNVTQQIED 783
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR21_ARATH (Glutamate receptor 2.1 OS=Arabidopsis thaliana GN=GLR2.1 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.315e-17 Identity = 56/142 (39.44%), Postives = 77/142 (54.23%), Query Frame = 2 Query: 74 SYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRC-EFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 SYTASL S+LT Q L + I+SL + +GYQ +SF L D E+ LV SPE L G +GGV+AV+ + Y +FL C ++ +V F +G GF FP SPL DIS AILK+ E+ ++ + Sbjct: 652 SYTASLASLLTTQHLHPTVTNINSLLAKGESVGYQ-SSFILGRLRDS-GFSEASLVSYGSPEHCDALLSKGQAEGGVSAVLMEVPYVRIFLGQYCNKYKMVQTPFKVDGLGFVFPIGSPLVADISRAILKVEESNKANQLEN 791
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR27_ARATH (Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 1.607e-15 Identity = 56/166 (33.73%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 2 EKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRC-EFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 EK VS L R SYTA+LTS TV+ L + L N IGYQ +F R L + DES+L P S E + +G + A D+ AY ++ LS ++++V F G+GF FP+ SPL D+S AIL +++ ++Q I + Sbjct: 636 EKVVSNLARFVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTNWKDLIKFNKNIGYQRGTFVRELLKSQ-GFDESQLKPFGSAVECDELFSNGT----ITASFDEVAYIKVILSQNSSKYTMVEPSFKTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQHIEN 796
BLAST of CX287079 vs. ExPASy Swiss-Prot
Match: GLR14_ARATH (Glutamate receptor 1.4 OS=Arabidopsis thaliana GN=GLR1.4 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.172e-12 Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 2 Query: 71 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEFNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTR-CEFSIVGQEFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHD 496 S+YTA+LTS++TVQ+ I+G+ SN IG+ S A N + D R L + +++ AL++G ++ +VD+ Y +LF++ EF IV E NG+GFAF + SPL +S I KL L+ I + Sbjct: 645 SNYTATLTSVMTVQQ----IRGL----KSNENIGFFSASIAANVVNDNPTFQGPRYKGLKTADDFTNALRNGT----ISFIVDEVPYVKLFVAKHPSEFVIVETESVTNGFGFAFQKGSPLVQKVSREIEKLRRTEKLKAIEN 775 The following BLAST results are available for this feature:
BLAST of CX287079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287079 ID=CX287079; Name=CX287079; organism=Citrus clementina; type=EST; length=498bpback to top |