CX287118

Overview
NameCX287118
Unique NameCX287118
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length508
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287118 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.243e-42
Identity = 80/113 (70.80%), Postives = 94/113 (83.19%), Query Frame = -3
Query:  174 NFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALS--DPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 506
            N +HRDEE++YFPSR+D VRHAE  P P      RREKC IPK+N+FKQ GERYR+WAPDRQERF+ RWV+ALS  DPR+THEIR IW+SYWSQA +SLGQKLAS LN+RP+I
Sbjct:  382 NAIHRDEEVNYFPSRHDTVRHAERVPIPTTHLSARREKCNIPKQNHFKQAGERYRTWAPDRQERFLRRWVEALSDTDPRITHEIRSIWVSYWSQADRSLGQKLASHLNMRPSI 494          
BLAST of CX287118 vs. ExPASy Swiss-Prot
Match: CATA2_MAIZE (Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 1.052e-41
Identity = 79/111 (71.17%), Postives = 91/111 (81.98%), Query Frame = -3
Query:  174 NFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 506
            NFMHR EE+DYFPSRYD VR+A  +P P     GRREK +I KENNFKQPGERYR+  P RQERFI RWVDALSDPR+THEIR IW+S WSQA +SLGQKLASRL+ +P++
Sbjct:  381 NFMHRHEEVDYFPSRYDAVRNAPRYPIPTAHIAGRREKTVISKENNFKQPGERYRAMDPARQERFITRWVDALSDPRLTHEIRTIWLSNWSQADRSLGQKLASRLSAKPSM 491          
BLAST of CX287118 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.374e-41
Identity = 76/111 (68.47%), Postives = 89/111 (80.18%), Query Frame = -3
Query:  174 NFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 506
            N  HRDEE+DY PSR+DP R AE +P P  +  GRR  C+IPKENNFKQ GERYRSW PDRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  382 NMTHRDEEVDYLPSRFDPCRPAEQYPIPSCVLNGRRTNCVIPKENNFKQAGERYRSWEPDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CX287118 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.795e-41
Identity = 78/111 (70.27%), Postives = 90/111 (81.08%), Query Frame = -3
Query:  174 NFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 506
            NFMHRDEE++YFPSR+DP RHAE  P PP +    REKCII KENNFKQ GERYRS+ P RQ+RFI RWVDAL+ PRVTHE R IWISYWSQ   +LGQKL SRLN++P++
Sbjct:  382 NFMHRDEEVNYFPSRFDPARHAEKVPIPPRVLTRCREKCIIQKENNFKQAGERYRSFDPARQDRFIQRWVDALTHPRVTHEHRTIWISYWSQCDAALGQKLPSRLNLKPSM 492          
BLAST of CX287118 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 6.820e-41
Identity = 75/111 (67.57%), Postives = 88/111 (79.28%), Query Frame = -3
Query:  174 NFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 506
            N  HRDEE+DY PSR+DP R AE +P P  +  GRR  C+IPKENNFKQ GERYRSW  DRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  382 NMTHRDEEVDYLPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNFKQAGERYRSWESDRQDRYITKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CX287118 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.984e-40
Identity = 75/111 (67.57%), Postives = 88/111 (79.28%), Query Frame = -3
Query:  174 NFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 506
            N  HRDEE+DYFPSR+DP R AE +P P  +  GRR  C+IPKENN KQ GERYRSW  DRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  382 NMTHRDEEVDYFPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNSKQAGERYRSWESDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CX287118 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.592e-35
Identity = 67/111 (60.36%), Postives = 87/111 (78.38%), Query Frame = -3
Query:  174 NFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 506
            NFMHRDEE+DY+PSR+ P+RHA   P  P    GRR+K  I K+N+FKQPGERYRSWAPDRQERFI R+   L+ P+V+ E+R IW++Y SQ  +SLG K+A+RLNV+P++
Sbjct:  382 NFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CX287118 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.592e-35
Identity = 67/111 (60.36%), Postives = 87/111 (78.38%), Query Frame = -3
Query:  174 NFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 506
            NFMHRDEE+DY+PSR+ P+RHA   P  P    GRR+K  I K+N+FKQPGERYRSWAPDRQERFI R+   L+ P+V+ E+R IW++Y SQ  +SLG K+A+RLNV+P++
Sbjct:  382 NFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CX287118 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.246e-34
Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = -3
Query:  174 NFMHRDEEIDYFPSRYDPVRHAE--MHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 506
            NFMHRDEE+DY+PSR+ P+RHAE    P P     G+REK  I KEN+F QPGERYRSWAPDRQ+RF+ R+ DAL+ P+V+HE+R IWI + S+  KS G K+A+RLNV+P++
Sbjct:  382 NFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVRRFSDALAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 494          
BLAST of CX287118 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.899e-31
Identity = 65/113 (57.52%), Postives = 84/113 (74.34%), Query Frame = -3
Query:  174 NFMHRDEEIDYFPSRYDPVRHAE--MHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 506
            NFMHRDEE+DY+PSR+ P+RHAE    P P     G+REK  I KEN+F QPGERYRSWAPDRQ+RF+      L+ P+V+HE+R IWI + S+  KS G K+A+RLNV+P++
Sbjct:  381 NFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVA-LRRRLAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 492          
The following BLAST results are available for this feature:
BLAST of CX287118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA_PEA1.243e-4270.80Catalase OS=Pisum sativum PE=2 SV=1[more]
CATA2_MAIZE1.052e-4171.17Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3[more]
CATA1_SOLLC1.374e-4168.47Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]
CATA1_MAIZE1.795e-4170.27Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1[more]
CATA2_SOLTU6.820e-4167.57Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_SOLTU1.984e-4067.57Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA1_ORYSJ5.592e-3560.36Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI5.592e-3560.36Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA2_HORVU1.246e-3460.18Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA_SECCE4.899e-3157.52Catalase OS=Secale cereale PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC01004H06SK Veg1 Citrus clementina cDNA clone C01004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287118 ID=CX287118; Name=CX287118; organism=Citrus clementina; type=EST; length=508bp
GCATTTATTTTAAGGAACATCATGTTTATGAATTACAGGACCAACATGTT
TTTTTTAGTATTACAAAATAACACACCACCCGAAAACGAATTCGCATTCC
TTAAACTGCTGACGTCCTCTGTGTTTACTCCTTGCTAACTCTTTCTAAAT
CACTCAGCTCCGCATCACCATTAAATGTTAGGCCTCACATTCAGACGAGA
TGCCAACTTCTGACCCAGAGACTTGCAAGCCTGAGACCAGTATGAGATCC
ATATGTGGCGGATCTCATGGGTGACGCGTGGATCAGATAAAGCATCAACC
CATCTGCAGATGAATCGCTCTTGCCTGTCTGGTGCCCAAGATCGGTATCT
CTCTCCAGGTTGTTTGAAGTTGTTTTCCTTTGGAATTATGCACTTCTCGC
GCCTTCCGCCGCAGATTTCAGGAGGAGTTGGATGCATCTCAGCATGACGG
ACAGGATCATACCTTGAAGGGAAGTAATCGATCTCCTCATCCCTGTGCAT
GAAATTCA
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